-
1
-
-
56749098074
-
Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing
-
Pan, Q., Shai, O., Lee, L.J., Frey, B.J. and Blencowe, B.J. (2008) Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing. Nat. Genet., 40, 1413-1415.
-
(2008)
Nat. Genet.
, vol.40
, pp. 1413-1415
-
-
Pan, Q.1
Shai, O.2
Lee, L.J.3
Frey, B.J.4
Blencowe, B.J.5
-
2
-
-
56549101959
-
Alternative isoform regulation in human tissue transcriptomes
-
DOI 10.1038/nature07509, PII NATURE07509
-
Wang, E.T., Sandberg, R., Luo, S., Khrebtukova, I., Zhang, L., Mayr, C., Kingsmore, S.F., Schroth, G.P. and Burge, C.B. (2008) Alternative isoform regulation in human tissue transcriptomes. Nature, 456, 470-476. (Pubitemid 352759009)
-
(2008)
Nature
, vol.456
, Issue.7221
, pp. 470-476
-
-
Wang, E.T.1
Sandberg, R.2
Luo, S.3
Khrebtukova, I.4
Zhang, L.5
Mayr, C.6
Kingsmore, S.F.7
Schroth, G.P.8
Burge, C.B.9
-
3
-
-
77957747157
-
The differential interaction of snRNPs with pre-mRNA reveals splicing kinetics in living cells
-
Huranová , M., Ivani, I., Benda, A., Poser, I., Brody, Y., Hof, M., Shav-Tal, Y., Neugebauer, K.M. and Stanek, D. (2010) The differential interaction of snRNPs with pre-mRNA reveals splicing kinetics in living cells. J. Cell. Biol., 191, 75-86.
-
(2010)
J. Cell. Biol.
, vol.191
, pp. 75-86
-
-
Huranová, M.1
Ivani, I.2
Benda, A.3
Poser, I.4
Brody, Y.5
Hof, M.6
Shav-Tal, Y.7
Neugebauer, K.M.8
Stanek, D.9
-
4
-
-
33748351186
-
Cotranscriptional coupling of splicing factor recruitment and precursor messenger RNA splicing in mammalian cells
-
DOI 10.1038/nsmb1135, PII NSMB1135
-
Listerman, I., Sapra, A.K. and Neugebauer, K.M. (2006) Cotranscriptional coupling of splicing factor recruitment and precursor messenger RNA splicing in mammalian cells. Nat. Struct. Mol. Biol., 13, 815-822. (Pubitemid 44338776)
-
(2006)
Nature Structural and Molecular Biology
, vol.13
, Issue.9
, pp. 815-822
-
-
Listerman, I.1
Sapra, A.K.2
Neugebauer, K.M.3
-
5
-
-
0035370526
-
Spliceosomal UsnRNP biogenesis, structure and function
-
DOI 10.1016/S0955-0674(00)00211-8
-
Will, C.L. and Luhrmann, R. (2001) Spliceosomal UsnRNP biogenesis, structure and function. Curr. Opin. Cell. Biol., 13, 290-301. (Pubitemid 32429493)
-
(2001)
Current Opinion in Cell Biology
, vol.13
, Issue.3
, pp. 290-301
-
-
Will, C.L.1
Luhrmann, R.2
-
6
-
-
79952504644
-
Ordered and dynamic assembly of single spliceosomes
-
Hoskins, A.A., Friedman, L.J., Gallagher, S.S., Crawford, D.J., Anderson, E.G., Wombacher, R., Ramirez, N., Cornish, V.W., Gelles, J. and Moore, M.J. (2011) Ordered and dynamic assembly of single spliceosomes. Science, 331, 1289-1295.
-
(2011)
Science
, vol.331
, pp. 1289-1295
-
-
Hoskins, A.A.1
Friedman, L.J.2
Gallagher, S.S.3
Crawford, D.J.4
Anderson, E.G.5
Wombacher, R.6
Ramirez, N.7
Cornish, V.W.8
Gelles, J.9
Moore, M.J.10
-
7
-
-
0032708815
-
Resolution of the mammalian E complex and the ATP-dependent spliceosomal complexes on native agarose mini-gels
-
DOI 10.1017/S1355838299991501
-
Das, R. and Reed, R. (1999) Resolution of the mammalian E complex and the ATP-dependent spliceosomal complexes on native agarose mini-gels. RNA, 5, 1504-1508. (Pubitemid 29530495)
-
(1999)
RNA
, vol.5
, Issue.11
, pp. 1504-1508
-
-
Das, R.1
Reed, R.2
-
8
-
-
0022549635
-
Electrophoretic separation of complexes involved in the splicing of precursors to mRNAs
-
Konarska, M.M. and Sharp, P.A. (1986) Electrophoretic separation of complexes involved in the splicing of precursors to mRNAs. Cell, 46, 845-855. (Pubitemid 16027933)
-
(1986)
Cell
, vol.46
, Issue.6
, pp. 845-855
-
-
Konarska, M.M.1
Sharp, P.A.2
-
9
-
-
84859294938
-
Functional mammalian spliceosomal complex e contains SMN complex proteins in addition to U1 and U2 snRNPs
-
Makarov, E.M., Owen, N., Bottrill, A. and Makarova, O.V. (2012) Functional mammalian spliceosomal complex E contains SMN complex proteins in addition to U1 and U2 snRNPs. Nucleic Acids Res., 40, 2639-2652.
-
(2012)
Nucleic Acids Res.
, vol.40
, pp. 2639-2652
-
-
Makarov, E.M.1
Owen, N.2
Bottrill, A.3
Makarova, O.V.4
-
10
-
-
78649656777
-
Characterization of purified human Bact spliceosomal complexes reveals compositional and morphological changes during spliceosome activation and first step catalysis
-
Bessonov, S., Anokhina, M., Krasauskas, A., Golas, M.M., Sander, B., Will, C.L., Urlaub, H., Stark, H. and Luhrmann, R. (2010) Characterization of purified human Bact spliceosomal complexes reveals compositional and morphological changes during spliceosome activation and first step catalysis. RNA, 16, 2384-2403.
-
(2010)
RNA
, vol.16
, pp. 2384-2403
-
-
Bessonov, S.1
Anokhina, M.2
Krasauskas, A.3
Golas, M.M.4
Sander, B.5
Will, C.L.6
Urlaub, H.7
Stark, H.8
Luhrmann, R.9
-
11
-
-
79959407313
-
Semiquantitative proteomic analysis of the human spliceosome via a novel two-dimensional gel electrophoresis method
-
Agafonov, D.E., Deckert, J., Wolf, E., Odenwä lder, P., Bessonov, S., Will, C.L., Urlaub, H. and Luhrmann, R. (2011) Semiquantitative proteomic analysis of the human spliceosome via a novel two-dimensional gel electrophoresis method. Mol. Cell. Biol., 31, 2667-2682.
-
(2011)
Mol. Cell. Biol.
, vol.31
, pp. 2667-2682
-
-
Agafonov, D.E.1
Deckert, J.2
Wolf, E.3
Odenwä Lder, P.4
Bessonov, S.5
Will, C.L.6
Urlaub, H.7
Luhrmann, R.8
-
12
-
-
0026655649
-
The spliceosome assembly pathway in mammalian extracts
-
Jamison, S.F., Crow, A. and Garcia-Blanco, M.A. (1992) The spliceosome assembly pathway in mammalian extracts. Mol. Cell. Biol., 12, 4279-4287.
-
(1992)
Mol. Cell. Biol.
, vol.12
, pp. 4279-4287
-
-
Jamison, S.F.1
Crow, A.2
Garcia-Blanco, M.A.3
-
13
-
-
0026263756
-
An ATP-independent complex commits pre-mRNA to the mammalian spliceosome assembly pathway
-
Michaud, S. and Reed, R. (1991) An ATP-independent complex commits pre-mRNA to the mammalian spliceosome assembly pathway. Genes Dev., 5, 2534-2546. (Pubitemid 21905937)
-
(1991)
Genes and Development
, vol.5
, Issue.12 PART B
, pp. 2534-2546
-
-
Michaud, S.1
Reed, R.2
-
14
-
-
0027215924
-
A functional association between the 5' and 3' splice sites is established in the earliest prespliceosome complex (E) in mammals
-
Michaud, S. and Reed, R. (1993) A functional association between the 50 and 30 splice site is established in the earliest prespliceosome complex (E) in mammals. Genes Dev., 7, 1008-1020. (Pubitemid 23170825)
-
(1993)
Genes and Development
, vol.7
, Issue.6
, pp. 1008-1020
-
-
Michaud, S.1
Reed, R.2
-
15
-
-
0028006713
-
SR proteins promote the first specific recognition of pre-mRNA and are present together with the U1 small nuclear ribonucleoprotein particle in a general splicing enhancer complex
-
Staknis, D. and Reed, R. (1994) SR proteins promote the first specific recognition of pre-mRNA and are present together with the U1 small nuclear ribonucleoprotein particle in a general splicing enhancer complex. Mol. Cell. Biol., 14, 7670-7682. (Pubitemid 24326433)
-
(1994)
Molecular and Cellular Biology
, vol.14
, Issue.11
, pp. 7670-7682
-
-
Staknis, D.1
Reed, R.2
-
16
-
-
79957784833
-
Interaction between the RNA binding domains of Ser-Arg splicing factor 1 and U1-70K snRNP protein determines early spliceosome assembly
-
Cho, S., Hoang, A., Sinha, R., Zhong, X.Y., Fu, X.D., Krainer, A.R. and Ghosh, G. (2011) Interaction between the RNA binding domains of Ser-Arg splicing factor 1 and U1-70K snRNP protein determines early spliceosome assembly. Proc. Natl Acad. Sci. USA, 108, 8233-8238.
-
(2011)
Proc. Natl Acad. Sci. USA
, vol.108
, pp. 8233-8238
-
-
Cho, S.1
Hoang, A.2
Sinha, R.3
Zhong, X.Y.4
Fu, X.D.5
Krainer, A.R.6
Ghosh, G.7
-
17
-
-
0027313349
-
Pathways for selection of 5' splice sites by U1 snRNPs and SF2/ASF
-
Eperon, I.C., Ireland, D.C., Smith, R.A., Mayeda, A. and Krainer, A.R. (1993) Pathways for selection of 50 splice sites by U1 snRNPs and SF2/ASF. EMBO J., 12, 3607-3617. (Pubitemid 23256447)
-
(1993)
EMBO Journal
, vol.12
, Issue.9
, pp. 3607-3617
-
-
Eperon, I.C.1
Ireland, D.C.2
Smith, R.A.3
Mayeda, A.4
Krainer, A.R.5
-
18
-
-
0028289188
-
Protein-protein interactions and 50-splice-site recognition in mammalian mRNA precursors
-
Kohtz, J.D., Jamison, S.F., Will, C.L., Zuo, P., Lü hrmann, R., Garcia-Blanco, M.A. and Manley, J.L. (1994) Protein-protein interactions and 50-splice-site recognition in mammalian mRNA precursors. Nature, 368, 119-124.
-
(1994)
Nature
, vol.368
, pp. 119-124
-
-
Kohtz, J.D.1
Jamison, S.F.2
Will, C.L.3
Zuo, P.4
Lü Hrmann, R.5
Garcia-Blanco, M.A.6
Manley, J.L.7
-
19
-
-
84863022278
-
A U1-U2 snRNP interaction network during intron definition
-
Shao, W., Kim, H.S., Cao, Y., Xu, Y.Z. and Query, C.C. (2012) A U1-U2 snRNP interaction network during intron definition. Mol. Cell. Biol., 32, 470-478.
-
(2012)
Mol. Cell. Biol.
, vol.32
, pp. 470-478
-
-
Shao, W.1
Kim, H.S.2
Cao, Y.3
Xu, Y.Z.4
Query, C.C.5
-
20
-
-
0036315512
-
Early organization of pre-mRNA during spliceosome assembly
-
DOI 10.1038/nsb822
-
Kent, O.A. and MacMillan, A.M. (2002) Early organization of pre-mRNA during spliceosome assembly. Nat. Struct. Biol., 9, 576-581. (Pubitemid 34816136)
-
(2002)
Nature Structural Biology
, vol.9
, Issue.8
, pp. 576-581
-
-
Kent, O.A.1
MacMillan, A.M.2
-
21
-
-
33846665912
-
The 5′ End of U2 snRNA Is in Close Proximity to U1 and Functional Sites of the Pre-mRNA in Early Spliceosomal Complexes
-
DOI 10.1016/j.molcel.2006.12.019, PII S1097276506008872
-
Dö nmez, G., Hartmuth, K., Kastner, B., Will, C.L. and Luhrmann, R. (2007) The 50 end of U2 snRNA is in close proximity to U1 and functional sites of the pre-mRNA in early spliceosomal complexes. Mol. Cell, 25, 399-411. (Pubitemid 46199285)
-
(2007)
Molecular Cell
, vol.25
, Issue.3
, pp. 399-411
-
-
Donmez, G.1
Hartmuth, K.2
Kastner, B.3
Will, C.L.4
Luhrmann, R.5
-
22
-
-
59449100357
-
Spliceosome assembly pathways for different types of alternative splicing converge during commitment to splice site pairing in the A complex
-
Kotlajich, M.V., Crabb, T.L. and Hertel, K.J. (2009) Spliceosome assembly pathways for different types of alternative splicing converge during commitment to splice site pairing in the A complex. Mol. Cell. Biol., 29, 1072-1082.
-
(2009)
Mol. Cell. Biol.
, vol.29
, pp. 1072-1082
-
-
Kotlajich, M.V.1
Crabb, T.L.2
Hertel, K.J.3
-
23
-
-
4143078172
-
Commitment to splice site pairing coincides with a complex formation
-
DOI 10.1016/j.molcel.2004.06.025, PII S1097276504003739
-
Lim, S.R. and Hertel, K.J. (2004) Commitment to splice site pairing coincides with A complex formation. Mol. Cell, 15, 477-483. (Pubitemid 39092762)
-
(2004)
Molecular Cell
, vol.15
, Issue.3
, pp. 477-483
-
-
Lim, S.R.1
Hertel, K.J.2
-
24
-
-
0033762534
-
Selection of alternative 50 splice sites: Role of U1 snRNP and models for the antagonistic effects of SF2/ASF and hnRNP A1
-
Eperon, I.C., Makarova, O.V., Mayeda, A., Munroe, S.H., Cá ceres, J.F., Hayward, D.G. and Krainer, A.R. (2000) Selection of alternative 50 splice sites: role of U1 snRNP and models for the antagonistic effects of SF2/ASF and hnRNP A1. Mol. Cell. Biol., 20, 8303-8318.
-
(2000)
Mol. Cell. Biol.
, vol.20
, pp. 8303-8318
-
-
Eperon, I.C.1
Makarova, O.V.2
Mayeda, A.3
Munroe, S.H.4
Cá Ceres, J.F.5
Hayward, D.G.6
Krainer, A.R.7
-
25
-
-
0037388256
-
Bifunctional antisense oligonucleotides provide a trans-acting splicing enhancer that stimulates SMN2 gene expression in patient fibroblasts
-
DOI 10.1073/pnas.0633863100
-
Skordis, L.A., Dunckley, M.G., Yue, B., Eperon, I.C. and Muntoni, F. (2003) Bifunctional antisense oligonucleotides provide a trans-acting splicing enhancer that stimulates SMN2 gene expression in patient fibroblasts. Proc. Natl Acad. Sci. USA, 100, 4114-4119. (Pubitemid 36418166)
-
(2003)
Proceedings of the National Academy of Sciences of the United States of America
, vol.100
, Issue.7
, pp. 4114-4119
-
-
Skordis, L.A.1
Dunckley, M.G.2
Yue, B.3
Eperon, I.C.4
Muntoni, F.5
-
26
-
-
0002479374
-
-
Higgins, S.J. and Hames, B.D. (eds) . IRL Press, Oxford
-
Eperon, I.C. and Krainer, A.R. (1994) In: Higgins, S.J. and Hames, B.D. (eds), RNA Processing: A Practical Approach. IRL Press, Oxford, pp. 57-101.
-
(1994)
RNA Processing: A Practical Approach
, pp. 57-101
-
-
Eperon, I.C.1
Krainer, A.R.2
-
27
-
-
0037012847
-
Partitioning of lipid-modified monomeric GFPs into membrane microdomains of live cells
-
DOI 10.1126/science.1068539
-
Zacharias, D.A., Violin, J.D., Newton, A.C. and Tsien, R.Y. (2002) Partitioning of lipid-modified monomeric GFPs into membrane microdomains of live cells. Science, 296, 913-916. (Pubitemid 34464897)
-
(2002)
Science
, vol.296
, Issue.5569
, pp. 913-916
-
-
Zacharias, D.A.1
Violin, J.D.2
Newton, A.C.3
Tsien, R.Y.4
-
28
-
-
0023895357
-
A small-scale procedure for preparation of nuclear extracts that support efficient transcription and pre-mRNA splicing
-
Lee, K.A., Bindereif, A. and Green, M.R. (1988) A small-scale procedure for preparation of nuclear extracts that support efficient transcription and pre-mRNA splicing. Gene Anal. Tech., 5, 22-31.
-
(1988)
Gene Anal. Tech.
, vol.5
, pp. 22-31
-
-
Lee, K.A.1
Bindereif, A.2
Green, M.R.3
-
29
-
-
0026751769
-
Intracellular distribution of the U1A protein depends on active transport and nuclear binding to U1 snRNA
-
Kambach, C. and Mattaj, I.W. (1992) Intracellular distribution of the U1A protein depends on active transport and nuclear binding to U1 snRNA. J. Cell. Biol., 118, 11-21.
-
(1992)
J. Cell. Biol.
, vol.118
, pp. 11-21
-
-
Kambach, C.1
Mattaj, I.W.2
-
30
-
-
77954957530
-
Stoichiometry of a regulatory splicing complex revealed by single-molecule analyses
-
Cherny, D., Gooding, C., Eperon, G.E., Coelho, M.B., Bagshaw, C.R., Smith, C.W. and Eperon, I.C. (2010) Stoichiometry of a regulatory splicing complex revealed by single-molecule analyses. EMBO J., 29, 2161-2172.
-
(2010)
EMBO J.
, vol.29
, pp. 2161-2172
-
-
Cherny, D.1
Gooding, C.2
Eperon, G.E.3
Coelho, M.B.4
Bagshaw, C.R.5
Smith, C.W.6
Eperon, I.C.7
-
31
-
-
41449108157
-
An oxygen scavenging system for improvement of dye stability in single-molecule fluorescence experiments
-
Aitken, C.E., Marshall, R.A. and Puglisi, J.D. (2008) An oxygen scavenging system for improvement of dye stability in single-molecule fluorescence experiments. Biophys. J., 94, 1826-1835.
-
(2008)
Biophys. J.
, vol.94
, pp. 1826-1835
-
-
Aitken, C.E.1
Marshall, R.A.2
Puglisi, J.D.3
-
32
-
-
78650273324
-
Functional organization of the Sm core in the crystal structure of human U1 snRNP
-
Weber, G., Trowitzsch, S., Kastner, B., Lü hrmann, R. and Wahl, M.C. (2010) Functional organization of the Sm core in the crystal structure of human U1 snRNP. EMBO J., 29, 4172-4184.
-
(2010)
EMBO J.
, vol.29
, pp. 4172-4184
-
-
Weber, G.1
Trowitzsch, S.2
Kastner, B.3
Lü Hrmann, R.4
Wahl, M.C.5
-
33
-
-
0004161838
-
-
Cambridge University Press, Cambridge
-
Press, W.H., Flannery, B.P., Teukolsky, S.A. and Vettering, W.T. (1992) Numerical Recipes in FORTRAN 77: The Art of Scientific Computing, 2nd edn. Cambridge University Press, Cambridge.
-
(1992)
Numerical Recipes in FORTRAN 77: The Art of Scientific Computing, 2nd Edn
-
-
Press, W.H.1
Flannery, B.P.2
Teukolsky, S.A.3
Vettering, W.T.4
-
34
-
-
0025137186
-
U1-specific protein C needed for efficient complex formation of U1 snRNP with a 50 splice site
-
Heinrichs, V., Bach, M., Winkelmann, G. and Luhrmann, R. (1990) U1-specific protein C needed for efficient complex formation of U1 snRNP with a 50 splice site. Science, 247, 69-72.
-
(1990)
Science
, vol.247
, pp. 69-72
-
-
Heinrichs, V.1
Bach, M.2
Winkelmann, G.3
Luhrmann, R.4
-
35
-
-
0028941920
-
Modulation of 50 splice site choice in pre-messenger RNA by two distinct steps
-
Tarn, W.Y. and Steitz, J.A. (1995) Modulation of 50 splice site choice in pre-messenger RNA by two distinct steps. Proc. Natl. Acad. Sci. USA, 92, 2504-2508.
-
(1995)
Proc. Natl. Acad. Sci. USA
, vol.92
, pp. 2504-2508
-
-
Tarn, W.Y.1
Steitz, J.A.2
-
36
-
-
0029847221
-
In vitro reconstitution of mammalian U1 snRNPs active in splicing: The U1-C protein enhances the formation of early (E) spliceosomal complexes
-
Will, C.L., Rü mpler, S., Klein Gunnewiek, J., van Venrooij, W.J. and Luhrmann, R. (1996) In vitro reconstitution of mammalian U1 snRNPs active in splicing: the U1-C protein enhances the formation of early (E) spliceosomal complexes. Nucleic Acids Res., 24, 4614-4623. (Pubitemid 26413336)
-
(1996)
Nucleic Acids Research
, vol.24
, Issue.23
, pp. 4614-4623
-
-
Will, C.L.1
Rumpler, S.2
Gunnewiek, J.K.3
Van Venrooij, W.J.4
Luhrmann, R.5
-
37
-
-
0032531261
-
Dynamic interactions between splicing snRNPs, coiled bodies and nucleoli revealed using snRNP protein fusions to the green fluorescent protein
-
DOI 10.1006/excr.1998.4135
-
Sleeman, J., Lyon, C.E., Platani, M., Kreivi, J.P. and Lamond, A.I. (1998) Dynamic interactions between splicing snRNPs, coiled bodies and nucleoli revealed using snRNP protein fusions to the green fluorescent protein. Exp. Cell Res., 243, 290-304. (Pubitemid 28488840)
-
(1998)
Experimental Cell Research
, vol.243
, Issue.2
, pp. 290-304
-
-
Sleeman, J.1
Lyon, C.E.2
Platani, M.3
Kreivi, J.-P.4
Lamond, A.I.5
-
38
-
-
58049196877
-
Role of Cajal bodies and nucleolus in the maturation of the U1 snRNP in Arabidopsis
-
Lorković , Z.J. and Barta, A. (2008) Role of Cajal bodies and nucleolus in the maturation of the U1 snRNP in Arabidopsis. PLoS One, 3, e3989.
-
(2008)
PLoS One
, vol.3
-
-
Lorković, Z.J.1
Barta, A.2
-
40
-
-
0028034324
-
Complementation by SR proteins of pre-mRNA splicing reactions depleted of U1 snRNP
-
Crispino, J.D., Blencowe, B.J. and Sharp, P.A. (1994) Complementation by SR proteins of pre-mRNA splicing reactions depleted of U1 snRNP. Science, 265, 1866-1869. (Pubitemid 24324242)
-
(1994)
Science
, vol.265
, Issue.5180
, pp. 1866-1869
-
-
Crispino, J.D.1
Blencowe, B.J.2
Sharp, P.A.3
-
41
-
-
0029949594
-
Cis-acting elements distinct from the 5' splice site promote U1- independent pre-mRNA splicing
-
Crispino, J.D., Mermoud, J.E., Lamond, A.I. and Sharp, P.A. (1996) Cis-acting elements distinct from the 50 splice site promote U1-independent pre-mRNA splicing. RNA, 2, 664-673. (Pubitemid 26374218)
-
(1996)
RNA
, vol.2
, Issue.7
, pp. 664-673
-
-
Crispino, J.D.1
Mermoud, J.E.2
Lamond, A.I.3
Sharp, P.A.4
-
42
-
-
0028072388
-
SR proteins can compensate for the loss of U1 snRNP functions in vitro
-
Tarn, W.Y. and Steitz, J.A. (1994) SR proteins can compensate for the loss of U1 snRNP functions in vitro. Genes Dev., 8, 2704-2717. (Pubitemid 24375420)
-
(1994)
Genes and Development
, vol.8
, Issue.22
, pp. 2704-2717
-
-
Tarn, W.-Y.1
Steitz, J.A.2
-
43
-
-
0033999614
-
Fourteen residues of the U1 snRNP-specific U1A protein are required for homodimerization, cooperative RNA binding, and inhibition of polyadenylation
-
DOI 10.1128/MCB.20.6.2209-2217.2000
-
Klein Gunnewiek, J.M., Hussein, R.I., van Aarssen, Y., Palacios, D., de Jong, R., van Venrooij, W.J. and Gunderson, S.I. (2000) Fourteen residues of the U1 snRNP-specific U1A protein are required for homodimerization, cooperative RNA binding, and inhibition of polyadenylation. Mol. Cell. Biol., 20, 2209-2217. (Pubitemid 30123836)
-
(2000)
Molecular and Cellular Biology
, vol.20
, Issue.6
, pp. 2209-2217
-
-
Gunnewiek, J.M.T.K.1
Hussein, R.I.2
Van Aarssen, Y.3
Palacios, D.4
De Jong, R.5
Van Venrooij, W.J.6
Gunderson, S.I.7
-
44
-
-
0034070741
-
The NMR structure of the 38 kDa U1A protein - PIE RNA complex reveals the basis of cooperativity in regulation of polyadenylation by human U1A protein
-
DOI 10.1038/74101
-
Varani, L., Gunderson, S.I., Mattaj, I.W., Kay, L.E., Neuhaus, D. and Varani, G. (2000) The NMR structure of the 38 kDa U1A protein-PIE RNA complex reveals the basis of cooperativity in regulation of polyadenylation by human U1A protein. Nat. Struct. Biol., 7, 329-335. (Pubitemid 30194458)
-
(2000)
Nature Structural Biology
, vol.7
, Issue.4
, pp. 329-335
-
-
Varani, L.1
Gunderson, S.I.2
Mattaj, L.W.3
Kay, L.E.4
Neuhaus, D.5
Varani, G.6
-
45
-
-
58149092362
-
Stalling of spliceosome assembly at distinct stages by small-molecule inhibitors of protein acetylation and deacetylation
-
Kuhn, A.N., van Santen, M.A., Schwienhorst, A., Urlaub, H. and Luhrmann, R. (2009) Stalling of spliceosome assembly at distinct stages by small-molecule inhibitors of protein acetylation and deacetylation. RNA, 15, 153-175.
-
(2009)
RNA
, vol.15
, pp. 153-175
-
-
Kuhn, A.N.1
Van Santen, M.A.2
Schwienhorst, A.3
Urlaub, H.4
Luhrmann, R.5
-
46
-
-
0027471377
-
The human U1 snRNP-specific U1A protein inhibits polyadenylation of its own pre-mRNA
-
DOI 10.1016/0092-8674(93)90577-D
-
Boelens, W.C., Jansen, E., Van, V.W., Stripecke, R., Mattal, I.W. and Gunderson, S.I. (1993) The human U1 snRNP-specific U1A protein inhibits polyadenylation of its own pre-mRNA. Cell, 72, 881-892. (Pubitemid 23110230)
-
(1993)
Cell
, vol.72
, Issue.6
, pp. 881-892
-
-
Boelens, W.C.1
Jansen, E.J.R.2
Van Venrooij, W.J.3
Stripecke, R.4
Mattal, I.W.5
Gunderson, S.I.6
-
47
-
-
0023088168
-
Multiple interactions between the splicing substrate and small nuclear ribonucleoproteins in spliceosomes
-
Chabot, B. and Steitz, J.A. (1987) Multiple interactions between the splicing substrate and small nuclear ribonucleoproteins in spliceosomes. Mol. Cell. Biol., 7, 281-293. (Pubitemid 17230411)
-
(1987)
Molecular and Cellular Biology
, vol.7
, Issue.1
, pp. 281-293
-
-
Chabot, B.1
Steitz, J.A.2
-
48
-
-
0030611640
-
65 recruits a novel human DEAD box protein required for the U2 snRNP-branchpoint interaction
-
Fleckner, J., Zhang, M., Valcá rcel, J. and Green, M.R. (1997) U2AF65 recruits a novel human DEAD box protein required for the U2 snRNP-branchpoint interaction. Genes Dev., 11, 1864-1872. (Pubitemid 27315215)
-
(1997)
Genes and Development
, vol.11
, Issue.14
, pp. 1864-1872
-
-
Fleckner, J.1
Zhang, M.2
Valcarcel, J.3
Green, M.R.4
-
49
-
-
46249107277
-
Distinct activities of the DExD/H-box splicing factor hUAP56 facilitate stepwise assembly of the spliceosome
-
DOI 10.1101/gad.1657308
-
Shen, H., Zheng, X., Shen, J., Zhang, L., Zhao, R. and Green, M.R. (2008) Distinct activities of the DExD/H-box splicing factor hUAP56 facilitate stepwise assembly of the spliceosome. Genes Dev., 22, 1796-1803. (Pubitemid 351915504)
-
(2008)
Genes and Development
, vol.22
, Issue.13
, pp. 1796-1803
-
-
Shen, H.1
Zheng, X.2
Shen, J.3
Zhang, L.4
Zhao, R.5
Green, M.R.6
-
50
-
-
1542380571
-
Prp5 bridges U1 and U2 snRNPs and enables stable U2 snRNP association with intron RNA
-
DOI 10.1038/sj.emboj.7600050
-
Xu, Y.Z., Newnham, C.M., Kameoka, S., Huang, T., Konarska, M.M. and Query, C.C. (2004) Prp5 bridges U1 and U2 snRNPs and enables stable U2 snRNP association with intron RNA. EMBO J., 23, 376-385. (Pubitemid 38294502)
-
(2004)
EMBO Journal
, vol.23
, Issue.2
, pp. 376-385
-
-
Xu, Y.-Z.1
Newnham, C.M.2
Kameoka, S.3
Huang, T.4
Konarska, M.M.5
Query, C.C.6
-
51
-
-
77950643284
-
Competing upstream 50 splice sites enhance the rate of proximal splicing
-
Hicks, M.J., Mueller, W.F., Shepard, P.J. and Hertel, K.J. (2010) Competing upstream 50 splice sites enhance the rate of proximal splicing. Mol. Cell. Biol., 30, 1878-1886.
-
(2010)
Mol. Cell. Biol.
, vol.30
, pp. 1878-1886
-
-
Hicks, M.J.1
Mueller, W.F.2
Shepard, P.J.3
Hertel, K.J.4
-
52
-
-
0022516779
-
A role for exon sequences and splice-site proximity in splice-site selection
-
Reed, R. and Maniatis, T. (1986) A role for exon sequences and splice-site proximity in splice-site selection. Cell, 46, 681-690. (Pubitemid 16020060)
-
(1986)
Cell
, vol.46
, Issue.5
, pp. 681-690
-
-
Reed, R.1
Maniatis, T.2
-
53
-
-
57649231776
-
Dynamic regulation of alternative splicing by silencers that modulate 50 splice site competition
-
Yu, Y., Maroney, P.A., Denker, J.A., Zhang, X.H., Dybkov, O., Lü hrmann, R., Jankowsky, E., Chasin, L.A. and Nilsen, T.W. (2008) Dynamic regulation of alternative splicing by silencers that modulate 50 splice site competition. Cell, 135, 1224-1236.
-
(2008)
Cell
, vol.135
, pp. 1224-1236
-
-
Yu, Y.1
Maroney, P.A.2
Denker, J.A.3
Zhang, X.H.4
Dybkov, O.5
Lü Hrmann, R.6
Jankowsky, E.7
Chasin, L.A.8
Nilsen, T.W.9
-
54
-
-
79956071179
-
DEAD-box proteins as RNA helicases and chaperones
-
Jarmoskaite, I. and Russell, R. (2011) DEAD-box proteins as RNA helicases and chaperones. Wiley Interdiscip. Rev. RNA, 2, 135-152.
-
(2011)
Wiley Interdiscip. Rev. RNA
, vol.2
, pp. 135-152
-
-
Jarmoskaite, I.1
Russell, R.2
-
55
-
-
0035668536
-
Making contacts on a nucleic acid polymer
-
DOI 10.1016/S0968-0004(01)01978-8, PII S0968000401019788
-
Rippe, K. (2001) Making contacts on a nucleic acid polymer. Trends Biochem. Sci., 26, 733-740. (Pubitemid 34014840)
-
(2001)
Trends in Biochemical Sciences
, vol.26
, Issue.12
, pp. 733-740
-
-
Rippe, K.1
-
56
-
-
0025981410
-
Influences of separation and adjacent sequences on the use of alternative 5′ splice sites
-
Cunningham, S.A., Else, A.J., Potter, B. and Eperon, I.C. (1991) Influences of separation and adjacent sequences on the use of alternative 50 splice sites. J. Mol. Biol., 217, 265-281. (Pubitemid 121003939)
-
(1991)
Journal of Molecular Biology
, vol.217
, Issue.2
, pp. 265-281
-
-
Cunningham, S.A.1
Else, A.J.2
Potter, B.V.L.3
Eperon, I.C.4
-
57
-
-
0019851631
-
Correlation of hnRNP structure and nascent transcript cleavage
-
Beyer, A.L., Bouton, A.H. and Miller, O.L. Jr (1981) Correlation of hnRNP structure and nascent transcript cleavage. Cell, 26, 155-165. (Pubitemid 12244495)
-
(1981)
Cell
, vol.26
, Issue.2
, pp. 155-165
-
-
Beyer, A.L.1
Bouton, A.H.2
Miller Jr., O.L.3
|