Inter-species sequence comparison of Brachypodium reveals how transposon activity corrodes genome colinearity

Plant Journal

Volumn 71, Issue 4, 2012, Pages 550-563

  Buchmann, Jan P ^a   Matsumoto, Takashi ^b   Stein, Nils ^c   Keller, Beat ^a   Wicker, Thomas ^a  

^a UNIVERSITY OF ZURICH   (Switzerland)

^b NATIONAL INSTITUTE OF AGROBIOLOGICAL SCIENCES   (Japan)

^c LEIBNIZ INSTITUTE OF PLANT GENETICS AND CROP PLANT RESEARCH IPK   (Germany)

Author keywords

Brachypodium distachyon; Brachypodium sylvaticum; colinearity; comparative genomics; double strand break repair; genome evolution; transposable elements

Indexed keywords

BRACHYPODIUM DISTACHYON; BRACHYPODIUM SYLVATICUM; COLINEARITY; COMPARATIVE GENOMICS; DOUBLE STRAND BREAK REPAIR; GENOME EVOLUTION; TRANSPOSABLE ELEMENTS;

DNA; GENES; REPAIR;

DNA SEQUENCES;

DNA; SPACER DNA;

ARTICLE; BIOLOGICAL MODEL; BRACHYPODIUM; COMPARATIVE STUDY; DNA REPAIR; EVOLUTION; GENE DELETION; GENETIC POLYMORPHISM; GENETICS; MOLECULAR EVOLUTION; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PLANT GENOME; SEQUENCE HOMOLOGY; TRANSPOSON;

BASE SEQUENCE; BIOLOGICAL EVOLUTION; BRACHYPODIUM; CONSERVED SEQUENCE; DNA; DNA REPAIR; DNA TRANSPOSABLE ELEMENTS; DNA, INTERGENIC; EVOLUTION, MOLECULAR; GENOME, PLANT; MODELS, GENETIC; MOLECULAR SEQUENCE DATA; POLYMORPHISM, GENETIC; SEQUENCE DELETION; SEQUENCE HOMOLOGY, NUCLEIC ACID;

BRACHYPODIUM; BRACHYPODIUM DISTACHYON; BRACHYPODIUM SYLVATICUM;

EID: 84864619310     PISSN: 09607412     EISSN: 1365313X     Source Type: Journal    
DOI: 10.1111/j.1365-313X.2012.05007.x     Document Type: Article

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