How plants make ends meet: DNA double-strand break repair

Trends in Plant Science

Volumn 4, Issue 7, 1999, Pages 263-269

  Gorbunova, Vera ^a   Levy, Avraham A ^a  

^a WEIZMANN INSTITUTE OF SCIENCE   (Israel)

Author keywords

[No Author keywords available]

Indexed keywords

DNA DOUBLE STRAND BREAK; DNA REPAIR; GENETIC RECOMBINATION; PLANT GENOME; PLANT GROWTH;

EID: 0033057606     PISSN: 13601385     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1360-1385(99)01430-2     Document Type: Review

References (52)

1. McClintock B. Cytological observations of deficiencies involving known genes, translocations and an inversion in Zea mays. Mo. Agric. Exp. Res. Stn. Res. Bull. 163:1931;4.
2. Vergunst A.C., Hooykaas P.J.J. Recombination in the plant genome and its application in biotechnology. Crit. Rev. Plant Sci. 18:1999;1-31.
3. Britt A.B. Molecular genetics of DNA repair in higher plants. Trends Plant Sci. 4:1999;20-25.
4. Carlson P.S. Mitotic crossing-over in a higher plant. Genet. Res. Camb. 24:1974;109-112.
5. Tovar J., Lichtenstein C. Somatic and meiotic chromosomal recombination between inverted duplications in transgenic tobacco. Plant Cell. 4:1992;319-332.
6. Lebel E.G.et al. Stress-induced intrachromosomal recombination in plant somatic cells. Proc. Natl. Acad. Sci. U. S. A. 90:1993;422-426.
7. Puchta H.et al. Induction of intrachromosomal homologous recombination in whole plants. Plant J. 7:1995;203-210.
8. Athma P., Peterson T. Ac induces homologous recombination at the maize P locus. Genetics. 128:1991;163-173.
9. Lowe B.et al. Active Mutator elements suppress the knotted phenotype and increase recombination at the Kn1-0 tandem duplication. Genetics. 132:1992;813-822.
10. Shalev G., Levy A.A. The maize transposable element Ac induces recombination between the donor site and an homologous ectopic sequence. Genetics. 146:1997;1143-1151.
11. Chiurazzi M.et al. Enhancement of somatic intrachromosomal homologous recombination in Arabidopsis by the HO endonuclease. Plant Cell. 8:1996;2057-2066.
12. Puchta H.et al. Two different but related mechanisms are used in plants for the repair of genomic double-strand breaks by homologous recombination. Proc. Natl. Acad. Sci. U. S. A. 93:1996;5055-5060.
13. Puchta H. DSB-induced recombination between ectopic homologous sequences in somatic plant cells. Genetics. . in press.
14. Rinehart T.A.et al. Comparative analysis of non-random DNA repair following Ac transposon excision in maize and Arabidopsis. Plant J. 12:1997;1419-1427.
15. Raina R.et al. Concerted formation of macromolecular supressor-mutator transposition complexes. Proc. Natl. Acad. Sci. U. S. A. 95:1998;8526-8531.
16. Coen E.S.et al. Consequences and mechanism of transposition in Antirrhinum majus. Berg D.E., Howe M.M. Mobile DNA. 1989;413-436 American Society for Microbiology, Washington, DC, USA.
17. Walker E.L.et al. Transposon-mediated chromosomal rearrangements and gene duplications in the formation of the maize R-r complex. EMBO J. 14(10):1995;2350-2363.
18. English J.et al. Aberrant transpositions of maize double Ds-like elements usually involve Ds ends on sister chromatids. Plant Cell. 7:1995;1235-1247.
19. Rubin E., Levy A.A. Abortive gap repair: the underlying mechanism for Ds elements formation. Mol. Cell Biol. 17:1997;6294-6302.
20. Gorbunova V., Levy A.A. Circularized Ac/Ds transposons: formation, structure and fate. Genetics. 145:1997;1161-1169.
21. Takano M.et al. The structures of integration sites in transgenic rice. Plant J. 11:1997;353-361.
22. Bakkeren G.et al. Recovery of Agrobacterium tumefaciens T-DNA molecules from whole plants early after transfer. Cell. 57:1989;847-857.
23. Bruggemann E.et al. Analysis of fast neutron-generated mutants at the Arabidopsis thaliana HY4 locus. Plant J. 10:1996;755-760.
24. Shirley B.W.et al. Effects of ionizing radiation on a plant genome: analysis of two Arabidopsis transparent testa mutations. Plant Cell. 4:1992;333-347.
25. Gorbunova V., Levy A.A. Non-homologous DNA end-joining in plant cells is associated with deletions and filler DNA insertions. Nucleic Acids Res. 25:1997;4650-4657.
26. Salomon S., Puchta H. Capture of genomic and T-DNA sequences during double-strand break repair in somatic plant cells. EMBO J. 17:1998;6086-6095.
27. Thode S.et al. A novel pathway of DNA end-to-end-joining. Cell. 60:1990;921-928.
28. Jeggo P.A. DNA breakage and repair. Adv. Genet. 38:1998;185-218.
29. Lin F.et al. Model for homologous recombination during transfer of DNA into mouse L cells: role for DNA ends in the recombination process. Mol. Cell. Biol. 4:1984;1020-1034.
30. Puchta H., Hohn B. The mechanism of extrachromosomal homologous DNA recombination in plant cells. Mol. Gen. Genet. 230:1991;1-7.
31. Prado F., Aguirela A. Role of reciprocal exchange, one-ended invasion crossover and single-strand annealing on inverted and direct repeat recombination in yeast: different requirements for the RAD1, RAD10, and RAD52 genes. Genetics. 139:1995;109-123.
32. Nassif N.et al. Efficient copying of nonhomologous sequences from ectopic sites via P element-induced gap repair. Mol. Cell. Biol. 14:1994;1613-1625.
33. Puchta H. Repair of genomic double-strand breaks in somatic plant cells by one-sided invasion of homologous sequences. Plant J. 13:1998;331-339.
34. Moore J.K., Haber J.E. Capture of retrotransposon DNA at the sites of chromosomal double strand breaks. Nature. 383:1996;644-646.
35. Teng S-C.et al. Retrotransposon reverse-transcriptase-mediated repair of chromosomal breaks. Nature. 383:1996;641-644.
36. Roth D.B.et al. Comparison of filler DNA at immune, nonimmune and oncogenic rearrangements suggests multiple mechanisms of formation. Mol. Cell. Biol. 9:1989;3049-3057.
37. Richter T.et al. New rust resistance specificities associated with recombination in the Rp1 complex in maize. Genetics. 141:1995;373-381.
38. Parniske M.et al. Novel disease resistance specificities result from sequence exchange between tandemly repeated genes at the Cf-4/9 locus of tomato. Cell. 91:1997;821-832.
39. Jenkins M.E.et al. Radiation-sensitive mutants of Arabidopsis thaliana. Genetics. 140:1995;725-732.
40. Jiang C.Z.et al. UV- and gamma-radiation sensitive mutants of Arabidopsis thaliana. Genetics. 147:1997;1401-1409.
41. Davies C.et al. Isolation of Arabidopsis thaliana mutants hypersensitive to gamma radiation. Mol. Gen. Genet. 243:1994;660-665.
42. Masson J.E.et al. Mutants of Arabidopsis thaliana hypersensitive to DNA-damaging treatments. Genetics. 146:1997;401-407.
43. Masson J.E., Paszkowski J. Arabidopsis thaliana mutants altered in homologous recombination. Proc. Natl. Acad. Sci. U. S. A. 94:1997;11731-11735.
44. Revenkova E.et al. Involvement of Arabidopsis thaliana ribosomal protein S27 in mRNA degradation triggered by genotoxic stress. EMBO J. 18:1999;490-499.
45. Smith, K.N. et al. (1996) Arabidopsis thaliana RAD51 homolog (AtRAD51), complete coding sequence. EMBL Accession No. U43528.
46. Doutriaux M.P.et al. Isolation and characterization of the RAD51 and DMC1 homologs from Arabidopsis thaliana. Mol. Gen. Genet. 257:1998;283-291.
47. Stassen N.Y.et al. Isolation and characterization of rad51 orthologs from Coprinus cinereus and Lycopersicon esculentum, and phylogenetic analysis of eukaryotic recA homologs. Curr. Genet. 31:1997;144-157.
48. Klimyuk V.I., Jones J. AtDMC1, the Arabidopsis homologue of yeast DMC1 gene: characterization, transposon-induced allelic variation and meiosis-associated expression. Plant J. 11:1997;1-14.
49. Kobayashi T.et al. Isolation and characterization of a yeast gene that is homologous with a meiosis-specific cDNA from a plant. Mol. Gen. Genet. 237:1993;225-232.
50. Taylor R.M.et al. Molecular cloning and functional analysis of the Arabidopsis thaliana DNA ligase I homologue. Plant J. 14:1998;75-81.
51. Wei W.et al. A novel nucleic acid helicase gene identified by promote trapping in Arabidopsis. Plant J. 11:1997;1307-1314.
52. Harlow G.R.et al. Isolation of uvh1, an Arabidopsis mutant hypersensitive to ultraviolet light and ionizing radiation. Plant Cell. 6:1994;227-235.