-
1
-
-
2942545812
-
Intragenomic heterogeneity and intergenomic recombination among haloarchaeal rRNA genes
-
Y. Boucher, C.J. Douady, A.K. Sharma, M. Kamekura, and W.F. Doolittle Intragenomic heterogeneity and intergenomic recombination among haloarchaeal rRNA genes J. Bacteriol. 186 2004 3980 3990
-
(2004)
J. Bacteriol.
, vol.186
, pp. 3980-3990
-
-
Boucher, Y.1
Douady, C.J.2
Sharma, A.K.3
Kamekura, M.4
Doolittle, W.F.5
-
2
-
-
79959256644
-
Biased gene transfer in microbial evolution
-
C.P. Andam, and J.P. Gogarten Biased gene transfer in microbial evolution Nat. Rev. Microbiol. 9 2011 543 555
-
(2011)
Nat. Rev. Microbiol.
, vol.9
, pp. 543-555
-
-
Andam, C.P.1
Gogarten, J.P.2
-
3
-
-
79960935954
-
Recombination and population structure in Salmonella enterica
-
X. Didelot, R. Bowden, T. Street, T. Golubchik, C. Spencer, G. McVean, V. Sangal, M.F. Anjum, M. Achtman, D. Falush, and P. Donnelly Recombination and population structure in Salmonella enterica PLoS Genet. 7 2011 e1002191
-
(2011)
PLoS Genet.
, vol.7
, pp. 1002191
-
-
Didelot, X.1
Bowden, R.2
Street, T.3
Golubchik, T.4
Spencer, C.5
McVean, G.6
Sangal, V.7
Anjum, M.F.8
Achtman, M.9
Falush, D.10
Donnelly, P.11
-
5
-
-
0036598066
-
Gene transfer in bacteria: Speciation without species?
-
J.G. Lawrence Gene transfer in bacteria: speciation without species? Theor. Popul. Biol. 61 2002 449 460
-
(2002)
Theor. Popul. Biol.
, vol.61
, pp. 449-460
-
-
Lawrence, J.G.1
-
6
-
-
84859499556
-
Ecology. How bacterial lineages emerge
-
R.T. Papke, and J.P. Gogarten Ecology. How bacterial lineages emerge Science 336 2012 45 46
-
(2012)
Science
, vol.336
, pp. 45-46
-
-
Papke, R.T.1
Gogarten, J.P.2
-
7
-
-
0024469392
-
The barrier to recombination between Escherichia coli and Salmonella typhimurium is disrupted in mismatch-repair mutants
-
C. Rayssiguier, D.S. Thaler, and M. Radman The barrier to recombination between Escherichia coli and Salmonella typhimurium is disrupted in mismatch-repair mutants Nature 342 1989 396 401
-
(1989)
Nature
, vol.342
, pp. 396-401
-
-
Rayssiguier, C.1
Thaler, D.S.2
Radman, M.3
-
8
-
-
0025865771
-
Interspecific recombination between Escherichia coli and Salmonella typhimurium occurs by the RecABCD pathway
-
C. Rayssiguier, C. Dohet, and M. Radman Interspecific recombination between Escherichia coli and Salmonella typhimurium occurs by the RecABCD pathway Biochimie 73 1991 371 374
-
(1991)
Biochimie
, vol.73
, pp. 371-374
-
-
Rayssiguier, C.1
Dohet, C.2
Radman, M.3
-
9
-
-
0030924545
-
Molecular keys to speciation: DNA polymorphism and the control of genetic exchange in enterobacteria
-
M. Vulić, F. Dionisio, F. Taddei, and M. Radman Molecular keys to speciation: DNA polymorphism and the control of genetic exchange in enterobacteria Proc. Natl. Acad. Sci. USA 94 1997 9763 9767
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 9763-9767
-
-
Vulić, M.1
Dionisio, F.2
Taddei, F.3
Radman, M.4
-
10
-
-
0033959357
-
Barriers to genetic exchange between bacterial species: Streptococcus pneumoniae transformation
-
J. Majewski, P. Zawadzki, P. Pickerill, F.M. Cohan, and C.G. Dowson Barriers to genetic exchange between bacterial species: Streptococcus pneumoniae transformation J. Bacteriol. 182 2000 1016 1023
-
(2000)
J. Bacteriol.
, vol.182
, pp. 1016-1023
-
-
Majewski, J.1
Zawadzki, P.2
Pickerill, P.3
Cohan, F.M.4
Dowson, C.G.5
-
11
-
-
0029038657
-
The log-linear relationship between sexual isolation and sequence divergence in Bacillus transformation is robust
-
P. Zawadzki, M.S. Roberts, and F.M. Cohan The log-linear relationship between sexual isolation and sequence divergence in Bacillus transformation is robust Genetics 140 1995 917 932
-
(1995)
Genetics
, vol.140
, pp. 917-932
-
-
Zawadzki, P.1
Roberts, M.S.2
Cohan, F.M.3
-
12
-
-
0024447751
-
The mechanism of DNA transfer in the mating system of an archaebacterium
-
I. Rosenshine, R. Tchelet, and M. Mevarech The mechanism of DNA transfer in the mating system of an archaebacterium Science 245 1989 1387 1389
-
(1989)
Science
, vol.245
, pp. 1387-1389
-
-
Rosenshine, I.1
Tchelet, R.2
Mevarech, M.3
-
13
-
-
0028330839
-
Interspecies Genetic Transfer in Halophilic Archaebacteria
-
R. Tchelet, and M. Mevarech Interspecies Genetic Transfer in Halophilic Archaebacteria Syst. Appl. Microbiol. 16 1994 578 581
-
(1994)
Syst. Appl. Microbiol.
, vol.16
, pp. 578-581
-
-
Tchelet, R.1
Mevarech, M.2
-
15
-
-
34250398425
-
Halobacterium volcanii spec. nov., a Dead Sea halobacterium with a moderate salt requirement
-
M.F. Mullakhanbhai, and H. Larsen Halobacterium volcanii spec. nov., a Dead Sea halobacterium with a moderate salt requirement Arch. Microbiol. 104 1975 207 214
-
(1975)
Arch. Microbiol.
, vol.104
, pp. 207-214
-
-
Mullakhanbhai, M.F.1
Larsen, H.2
-
16
-
-
0003012234
-
Classification of Non-Alkaliphilic Halobacteria Based on Numerical Taxonomy and Polar Lipid-Composition, and Description of Haloarcula Gen-Nov and Haloferax Gen-Nov
-
M. Torreblanca, F. Rodriguezvalera, G. Juez, A. Ventosa, M. Kamekura, and M. Kates Classification of Non-Alkaliphilic Halobacteria Based on Numerical Taxonomy and Polar Lipid-Composition, and Description of Haloarcula Gen-Nov and Haloferax Gen-Nov Syst. Appl. Microbiol. 8 1986 89 99
-
(1986)
Syst. Appl. Microbiol.
, vol.8
, pp. 89-99
-
-
Torreblanca, M.1
Rodriguezvalera, F.2
Juez, G.3
Ventosa, A.4
Kamekura, M.5
Kates, M.6
-
17
-
-
77954362415
-
The complete genome sequence of Haloferax volcanii DS2, a model archaeon
-
A.L. Hartman, C. Norais, J.H. Badger, S. Delmas, S. Haldenby, R. Madupu, J. Robinson, H. Khouri, Q. Ren, and T.M. Lowe The complete genome sequence of Haloferax volcanii DS2, a model archaeon PLoS ONE 5 2010 e9605
-
(2010)
PLoS ONE
, vol.5
, pp. 9605
-
-
Hartman, A.L.1
Norais, C.2
Badger, J.H.3
Delmas, S.4
Haldenby, S.5
Madupu, R.6
Robinson, J.7
Khouri, H.8
Ren, Q.9
Lowe, T.M.10
-
18
-
-
79251633949
-
In vivo characterization of the homing endonuclease within the polB gene in the halophilic archaeon Haloferax volcanii
-
A. Naor, R. Lazary, A. Barzel, R.T. Papke, and U. Gophna In vivo characterization of the homing endonuclease within the polB gene in the halophilic archaeon Haloferax volcanii PLoS ONE 6 2011 e15833
-
(2011)
PLoS ONE
, vol.6
, pp. 15833
-
-
Naor, A.1
Lazary, R.2
Barzel, A.3
Papke, R.T.4
Gophna, U.5
-
19
-
-
33846625056
-
Recombination and the nature of bacterial speciation
-
C. Fraser, W.P. Hanage, and B.G. Spratt Recombination and the nature of bacterial speciation Science 315 2007 476 480
-
(2007)
Science
, vol.315
, pp. 476-480
-
-
Fraser, C.1
Hanage, W.P.2
Spratt, B.G.3
-
20
-
-
0028987147
-
Genomic stability in the archaeae Haloferax volcanii and Haloferax mediterranei
-
P. López-García, A. St Jean, R. Amils, and R.L. Charlebois Genomic stability in the archaeae Haloferax volcanii and Haloferax mediterranei J. Bacteriol. 177 1995 1405 1408
-
(1995)
J. Bacteriol.
, vol.177
, pp. 1405-1408
-
-
López-García, P.1
St Jean, A.2
Amils, R.3
Charlebois, R.L.4
-
21
-
-
35048898799
-
Genetic exchange across a species boundary in the archaeal genus ferroplasma
-
J.M. Eppley, G.W. Tyson, W.M. Getz, and J.F. Banfield Genetic exchange across a species boundary in the archaeal genus ferroplasma Genetics 177 2007 407 416
-
(2007)
Genetics
, vol.177
, pp. 407-416
-
-
Eppley, J.M.1
Tyson, G.W.2
Getz, W.M.3
Banfield, J.F.4
-
22
-
-
0026556412
-
Genomic organization of the halophilic archaeon Haloferax mediterranei: Physical map of the chromosome
-
P. López-García, J.P. Abad, C. Smith, and R. Amils Genomic organization of the halophilic archaeon Haloferax mediterranei: physical map of the chromosome Nucleic Acids Res. 20 1992 2459 2464
-
(1992)
Nucleic Acids Res.
, vol.20
, pp. 2459-2464
-
-
López-García, P.1
Abad, J.P.2
Smith, C.3
Amils, R.4
-
23
-
-
59849086092
-
The bacterial species challenge: Making sense of genetic and ecological diversity
-
C. Fraser, E.J. Alm, M.F. Polz, B.G. Spratt, and W.P. Hanage The bacterial species challenge: making sense of genetic and ecological diversity Science 323 2009 741 746
-
(2009)
Science
, vol.323
, pp. 741-746
-
-
Fraser, C.1
Alm, E.J.2
Polz, M.F.3
Spratt, B.G.4
Hanage, W.P.5
-
24
-
-
43849089834
-
Microbial diversity and the genetic nature of microbial species
-
M. Achtman, and M. Wagner Microbial diversity and the genetic nature of microbial species Nat. Rev. Microbiol. 6 2008 431 440
-
(2008)
Nat. Rev. Microbiol.
, vol.6
, pp. 431-440
-
-
Achtman, M.1
Wagner, M.2
-
25
-
-
79952711441
-
Neisseria meningitidis is structured in clades associated with restriction modification systems that modulate homologous recombination
-
S. Budroni, E. Siena, J.C. Dunning Hotopp, K.L. Seib, D. Serruto, C. Nofroni, M. Comanducci, D.R. Riley, S.C. Daugherty, and S.V. Angiuoli Neisseria meningitidis is structured in clades associated with restriction modification systems that modulate homologous recombination Proc. Natl. Acad. Sci. USA 108 2011 4494 4499
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 4494-4499
-
-
Budroni, S.1
Siena, E.2
Dunning Hotopp, J.C.3
Seib, K.L.4
Serruto, D.5
Nofroni, C.6
Comanducci, M.7
Riley, D.R.8
Daugherty, S.C.9
Angiuoli, S.V.10
-
26
-
-
16544367143
-
Extracellular-peptide control of competence for genetic transformation in Streptococcus pneumoniae
-
J.P. Claverys, and L.S. Havarstein Extracellular-peptide control of competence for genetic transformation in Streptococcus pneumoniae Front Biosci 7 2002 d1798 1814
-
(2002)
Front Biosci
, vol.7
, pp. 1798-1814
-
-
Claverys, J.P.1
Havarstein, L.S.2
-
27
-
-
33645065353
-
Natural transformation of Neisseria gonorrhoeae: From DNA donation to homologous recombination
-
H.L. Hamilton, and J.P. Dillard Natural transformation of Neisseria gonorrhoeae: from DNA donation to homologous recombination Mol. Microbiol. 59 2006 376 385
-
(2006)
Mol. Microbiol.
, vol.59
, pp. 376-385
-
-
Hamilton, H.L.1
Dillard, J.P.2
-
29
-
-
58549091696
-
Proteomics-inferred genome typing (PIGT) demonstrates inter-population recombination as a strategy for environmental adaptation
-
V.J. Denef, N.C. VerBerkmoes, M.B. Shah, P. Abraham, M. Lefsrud, R.L. Hettich, and J.F. Banfield Proteomics-inferred genome typing (PIGT) demonstrates inter-population recombination as a strategy for environmental adaptation Environ. Microbiol. 11 2009 313 325
-
(2009)
Environ. Microbiol.
, vol.11
, pp. 313-325
-
-
Denef, V.J.1
Verberkmoes, N.C.2
Shah, M.B.3
Abraham, P.4
Lefsrud, M.5
Hettich, R.L.6
Banfield, J.F.7
-
30
-
-
84857470045
-
Patterns of gene flow define species of thermophilic Archaea
-
H. Cadillo-Quiroz, X. Didelot, N.L. Held, A. Herrera, A. Darling, M.L. Reno, D.J. Krause, and R.J. Whitaker Patterns of gene flow define species of thermophilic Archaea PLoS Biol. 10 2012 e1001265
-
(2012)
PLoS Biol.
, vol.10
, pp. 1001265
-
-
Cadillo-Quiroz, H.1
Didelot, X.2
Held, N.L.3
Herrera, A.4
Darling, A.5
Reno, M.L.6
Krause, D.J.7
Whitaker, R.J.8
-
31
-
-
10644271631
-
Archaeal genetics - The third way
-
T. Allers, and M. Mevarech Archaeal genetics - the third way Nat. Rev. Genet. 6 2005 58 73
-
(2005)
Nat. Rev. Genet.
, vol.6
, pp. 58-73
-
-
Allers, T.1
Mevarech, M.2
-
32
-
-
83055169245
-
A multilocus sequence analysis approach to the phylogeny and taxonomy of the Halobacteriales
-
R.T. Papke, E. White, P. Reddy, G. Weigel, M. Kamekura, H. Minegishi, R. Usami, and A. Ventosa A multilocus sequence analysis approach to the phylogeny and taxonomy of the Halobacteriales Int. J. Syst. Evol. Microbiol. 61 2011 2984 2995
-
(2011)
Int. J. Syst. Evol. Microbiol.
, vol.61
, pp. 2984-2995
-
-
Papke, R.T.1
White, E.2
Reddy, P.3
Weigel, G.4
Kamekura, M.5
Minegishi, H.6
Usami, R.7
Ventosa, A.8
-
33
-
-
34547299728
-
Genomic plasticity in prokaryotes: The case of the square haloarchaeon
-
S. Cuadros-Orellana, A.B. Martin-Cuadrado, B. Legault, G. D'Auria, O. Zhaxybayeva, R.T. Papke, and F. Rodriguez-Valera Genomic plasticity in prokaryotes: the case of the square haloarchaeon ISME J. 1 2007 235 245
-
(2007)
ISME J.
, vol.1
, pp. 235-245
-
-
Cuadros-Orellana, S.1
Martin-Cuadrado, A.B.2
Legault, B.3
D'Auria, G.4
Zhaxybayeva, O.5
Papke, R.T.6
Rodriguez-Valera, F.7
-
34
-
-
35348887800
-
Searching for species in haloarchaea
-
R.T. Papke, O. Zhaxybayeva, E.J. Feil, K. Sommerfeld, D. Muise, and W.F. Doolittle Searching for species in haloarchaea Proc. Natl. Acad. Sci. USA 104 2007 14092 14097
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 14092-14097
-
-
Papke, R.T.1
Zhaxybayeva, O.2
Feil, E.J.3
Sommerfeld, K.4
Muise, D.5
Doolittle, W.F.6
-
35
-
-
58549084151
-
A comparison of homologous recombination rates in bacteria and archaea
-
M. Vos, and X. Didelot A comparison of homologous recombination rates in bacteria and archaea ISME J. 3 2009 199 208
-
(2009)
ISME J.
, vol.3
, pp. 199-208
-
-
Vos, M.1
Didelot, X.2
-
36
-
-
27844577665
-
Recombination shapes the natural population structure of the hyperthermophilic archaeon Sulfolobus islandicus
-
R.J. Whitaker, D.W. Grogan, and J.W. Taylor Recombination shapes the natural population structure of the hyperthermophilic archaeon Sulfolobus islandicus Mol. Biol. Evol. 22 2005 2354 2361
-
(2005)
Mol. Biol. Evol.
, vol.22
, pp. 2354-2361
-
-
Whitaker, R.J.1
Grogan, D.W.2
Taylor, J.W.3
-
37
-
-
0034539018
-
Population structure and evolutionary dynamics of pathogenic bacteria
-
J.M. Smith, E.J. Feil, and N.H. Smith Population structure and evolutionary dynamics of pathogenic bacteria Bioessays 22 2000 1115 1122
-
(2000)
Bioessays
, vol.22
, pp. 1115-1122
-
-
Smith, J.M.1
Feil, E.J.2
Smith, N.H.3
-
38
-
-
84859499489
-
Population genomics of early events in the ecological differentiation of bacteria
-
B.J. Shapiro, J. Friedman, O.X. Cordero, S.P. Preheim, S.C. Timberlake, G. Szabó, M.F. Polz, and E.J. Alm Population genomics of early events in the ecological differentiation of bacteria Science 336 2012 48 51
-
(2012)
Science
, vol.336
, pp. 48-51
-
-
Shapiro, B.J.1
Friedman, J.2
Cordero, O.X.3
Preheim, S.P.4
Timberlake, S.C.5
Szabó, G.6
Polz, M.F.7
Alm, E.J.8
-
39
-
-
77949301654
-
Biogeography of thermophilic cyanobacteria: Insights from the Zerka Ma'in hot springs (Jordan)
-
D. Ionescu, M. Hindiyeh, H. Malkawi, and A. Oren Biogeography of thermophilic cyanobacteria: insights from the Zerka Ma'in hot springs (Jordan) FEMS Microbiol. Ecol. 72 2010 103 113
-
(2010)
FEMS Microbiol. Ecol.
, vol.72
, pp. 103-113
-
-
Ionescu, D.1
Hindiyeh, M.2
Malkawi, H.3
Oren, A.4
-
41
-
-
79251564892
-
Ancient origins determine global biogeography of hot and cold desert cyanobacteria
-
J. Bahl, M.C. Lau, G.J. Smith, D. Vijaykrishna, S.C. Cary, D.C. Lacap, C.K. Lee, R.T. Papke, K.A. Warren-Rhodes, and F.K. Wong Ancient origins determine global biogeography of hot and cold desert cyanobacteria Nat. Commun. 2 2011 163
-
(2011)
Nat. Commun.
, vol.2
, pp. 163
-
-
Bahl, J.1
Lau, M.C.2
Smith, G.J.3
Vijaykrishna, D.4
Cary, S.C.5
Lacap, D.C.6
Lee, C.K.7
Papke, R.T.8
Warren-Rhodes, K.A.9
Wong, F.K.10
-
42
-
-
77749304005
-
Improved strains and plasmid vectors for conditional overexpression of His-tagged proteins in Haloferax volcanii
-
T. Allers, S. Barak, S. Liddell, K. Wardell, and M. Mevarech Improved strains and plasmid vectors for conditional overexpression of His-tagged proteins in Haloferax volcanii Appl. Environ. Microbiol. 76 2010 1759 1769
-
(2010)
Appl. Environ. Microbiol.
, vol.76
, pp. 1759-1769
-
-
Allers, T.1
Barak, S.2
Liddell, S.3
Wardell, K.4
Mevarech, M.5
-
43
-
-
0024517567
-
Transformation methods for halophilic archaebacteria
-
S.W. Cline, W.L. Lam, R.L. Charlebois, L.C. Schalkwyk, and W.F. Doolittle Transformation methods for halophilic archaebacteria Can. J. Microbiol. 35 1989 148 152
-
(1989)
Can. J. Microbiol.
, vol.35
, pp. 148-152
-
-
Cline, S.W.1
Lam, W.L.2
Charlebois, R.L.3
Schalkwyk, L.C.4
Doolittle, W.F.5
-
44
-
-
2342625231
-
Development of additional selectable markers for the halophilic archaeon Haloferax volcanii based on the leuB and trpA genes
-
T. Allers, H.P. Ngo, M. Mevarech, and R.G. Lloyd Development of additional selectable markers for the halophilic archaeon Haloferax volcanii based on the leuB and trpA genes Appl. Environ. Microbiol. 70 2004 943 953
-
(2004)
Appl. Environ. Microbiol.
, vol.70
, pp. 943-953
-
-
Allers, T.1
Ngo, H.P.2
Mevarech, M.3
Lloyd, R.G.4
-
45
-
-
0037309062
-
Development of a gene knockout system for the halophilic archaeon Haloferax volcanii by use of the pyrE gene
-
G. Bitan-Banin, R. Ortenberg, and M. Mevarech Development of a gene knockout system for the halophilic archaeon Haloferax volcanii by use of the pyrE gene J. Bacteriol. 185 2003 772 778
-
(2003)
J. Bacteriol.
, vol.185
, pp. 772-778
-
-
Bitan-Banin, G.1
Ortenberg, R.2
Mevarech, M.3
-
46
-
-
0024706289
-
Shuttle vectors for the archaebacterium Halobacterium volcanii
-
W.L. Lam, and W.F. Doolittle Shuttle vectors for the archaebacterium Halobacterium volcanii Proc. Natl. Acad. Sci. USA 86 1989 5478 5482
-
(1989)
Proc. Natl. Acad. Sci. USA
, vol.86
, pp. 5478-5482
-
-
Lam, W.L.1
Doolittle, W.F.2
-
47
-
-
0025099311
-
A plasmid vector with a selectable marker for halophilic archaebacteria
-
M.L. Holmes, and M.L. Dyall-Smith A plasmid vector with a selectable marker for halophilic archaebacteria J. Bacteriol. 172 1990 756 761
-
(1990)
J. Bacteriol.
, vol.172
, pp. 756-761
-
-
Holmes, M.L.1
Dyall-Smith, M.L.2
|