-
1
-
-
0032825315
-
Sweet-www-based rapid 3D construction of oligo-and polysaccharides
-
Bohne A, Lang E, von der Lieth CW. 1999. SWEET-WWW-based rapid 3D construction of oligo-and polysaccharides. Bioinformatics. 15:767-768.
-
(1999)
Bioinformatics
, vol.15
, pp. 767-768
-
-
Bohne, A.1
Lang, E.2
Von Der Lieth, C.W.3
-
2
-
-
34249822248
-
Structural basis for the recognition of blood group trisaccharides by norovirus
-
Cao S, Lou Z, Tan M, Chen Y, Liu Y, Zhang Z, Zhang XC, Jiang X, Li X, Rao Z. 2007. Structural basis for the recognition of blood group trisaccharides by norovirus. J Virol. 81:5949-5957.
-
(2007)
J Virol
, vol.81
, pp. 5949-5957
-
-
Cao, S.1
Lou, Z.2
Tan, M.3
Chen, Y.4
Liu, Y.5
Zhang, Z.6
Zhang, X.C.7
Jiang, X.8
Li, X.9
Rao, Z.10
-
3
-
-
79960933686
-
Crystallography of a Lewis-binding norovirus, elucidation of strainspecificity to the polymorphic human histo-blood group antigens
-
Chen Y, Tan M, Xia M, Hao N, Zhang XC, Huang P, Jiang X, Li X, Rao Z. 2011. Crystallography of a Lewis-binding norovirus, elucidation of strainspecificity to the polymorphic human histo-blood group antigens. PLoS Pathog. 7:e1002152.
-
(2011)
PLoS Pathog
, vol.7
-
-
Chen, Y.1
Tan, M.2
Xia, M.3
Hao, N.4
Zhang, X.C.5
Huang, P.6
Jiang, X.7
Li, X.8
Rao, Z.9
-
4
-
-
0027196879
-
Structures of the lectin IV of griffonia simplicifolia and its complex with the lewis b human blood group determinant at 2.0 A resolution
-
Delbaere LT, Vandonselaar M, Prasad L, Quail JW, Wilson KS, Dauter Z. 1993. Structures of the lectin IV of Griffonia simplicifolia and its complex with the Lewis b human blood group determinant at 2.0 A resolution. J Mol Biol. 230:950-965.
-
(1993)
J Mol Biol
, vol.230
, pp. 950-965
-
-
Delbaere, L.T.1
Vandonselaar, M.2
Prasad, L.3
Quail, J.W.4
Wilson, K.S.5
Dauter, Z.6
-
5
-
-
79955396668
-
Qualitative and quantitative analysis of the binding of GII.4 norovirus variants onto human blood group antigens
-
de Rougemont A, Ruvoen-Clouet N, Simon B, Estienney M, Elie-Caille C, Aho S, Pothier P, Le Pendu J, Boireau W, Belliot G. 2011. Qualitative and quantitative analysis of the binding of GII.4 norovirus variants onto human blood group antigens. J Virol. 85:4057-4070.
-
(2011)
J Virol
, vol.85
, pp. 4057-4070
-
-
De Rougemont, A.1
Ruvoen-Clouet, N.2
Simon, B.3
Estienney, M.4
Elie-Caille, C.5
Aho, S.6
Pothier, P.7
Le Pendu, J.8
Boireau, W.9
Belliot, G.10
-
7
-
-
0036642439
-
Epidemiologic and molecular trends of "norwalk-like viruses" associated with outbreaks of gastroenteritis in the United States
-
Fankhauser RL, Monroe SS, Noel JS, Humphrey CD, Bresee JS, Parashar UD, Ando T, Glass RI. 2002. Epidemiologic and molecular trends of "Norwalk-like viruses" associated with outbreaks of gastroenteritis in the United States. J Infect Dis. 186:1-7.
-
(2002)
J Infect Dis
, vol.186
, pp. 1-7
-
-
Fankhauser, R.L.1
Monroe, S.S.2
Noel, J.S.3
Humphrey, C.D.4
Bresee, J.S.5
Parashar, U.D.6
Ando, T.7
Glass, R.I.8
-
8
-
-
70450187110
-
A possible role for metallic ions in the carbohydrate cluster recognition displayed by A lewis y specific antibody
-
Farrugia W, Scott AM, Ramsland PA. 2009. A possible role for metallic ions in the carbohydrate cluster recognition displayed by a Lewis Y specific antibody. PloS ONE. 4:e7777.
-
(2009)
PloS ONE
, vol.4
-
-
Farrugia, W.1
Scott, A.M.2
Ramsland, P.A.3
-
9
-
-
84856741481
-
Structure of the lectin regulatory domain of the cholesterol-dependent cytolysin lectinolysin reveals the basis for its lewis antigen specificity
-
Feil SC, Lawrence S, Mulhern TD, Holien JK, Hotze EM, Farrand S, Tweten RK, Parker MW. 2012. Structure of the lectin regulatory domain of the cholesterol-dependent cytolysin lectinolysin reveals the basis for its Lewis antigen specificity. Structure. 20:248-258.
-
(2012)
Structure
, vol.20
, pp. 248-258
-
-
Feil, S.C.1
Lawrence, S.2
Mulhern, T.D.3
Holien, J.K.4
Hotze, E.M.5
Farrand, S.6
Tweten, R.K.7
Parker, M.W.8
-
10
-
-
84856006189
-
Molecular details of the recognition of blood group antigens by a human norovirus as determined by STD NMR spectroscopy
-
Fiege B, Rademacher C, Cartmell J, Kitov PI, Parra F, Peters T. 2012. Molecular details of the recognition of blood group antigens by a human norovirus as determined by STD NMR spectroscopy. Angew Chem Int Ed Engl. 51:928-932.
-
(2012)
Angew Chem Int Ed Engl
, vol.51
, pp. 928-932
-
-
Fiege, B.1
Rademacher, C.2
Cartmell, J.3
Kitov, P.I.4
Parra, F.5
Peters, T.6
-
11
-
-
33846115011
-
GlycomapsDB: A database of the accessible conformational space of glycosidic linkages
-
Frank M, Lutteke T, von der Lieth CW. 2007. GlycoMapsDB: A database of the accessible conformational space of glycosidic linkages. Nucl Acids Res. 35:287-290.
-
(2007)
Nucl Acids Res
, vol.35
, pp. 287-290
-
-
Frank, M.1
Lutteke, T.2
Von Der Lieth, C.W.3
-
12
-
-
80052054459
-
Crystal structures of GII.10 and GII.12 norovirus protruding domains in complex with histo-blood group antigens reveal details for a potential site of vulnerability
-
Hansman GS, Biertumpfel C, Georgiev I, McLellan JS, Chen L, Zhou T, Katayama K, Kwong PD. 2011. Crystal structures of GII.10 and GII.12 norovirus protruding domains in complex with histo-blood group antigens reveal details for a potential site of vulnerability. J Virol. 85:6687-6701.
-
(2011)
J Virol
, vol.85
, pp. 6687-6701
-
-
Hansman, G.S.1
Biertumpfel, C.2
Georgiev, I.3
McLellan, J.S.4
Chen, L.5
Zhou, T.6
Katayama, K.7
Kwong, P.D.8
-
13
-
-
1542377534
-
Norovirus capture with histo-blood group antigens reveals novel virus-ligand interactions
-
Harrington PR, Vinje J, Moe CL, Baric RS. 2004. Norovirus capture with histo-blood group antigens reveals novel virus-ligand interactions. J Virol. 78:3035-3045.
-
(2004)
J Virol
, vol.78
, pp. 3035-3045
-
-
Harrington, P.R.1
Vinje, J.2
Moe, C.L.3
Baric, R.S.4
-
14
-
-
79952588669
-
Assessing the performance of the MM/PBSA and MM/GBSA methods. 1. The accuracy of binding free energy calculations based on molecular dynamics simulations
-
Hou T, Wang J, Li Y, Wang W. 2011. Assessing the performance of the MM/PBSA and MM/GBSA methods. 1. The accuracy of binding free energy calculations based on molecular dynamics simulations. J Chem Inf Model. 51:69-82.
-
(2011)
J Chem Inf Model
, vol.51
, pp. 69-82
-
-
Hou, T.1
Wang, J.2
Li, Y.3
Wang, W.4
-
15
-
-
0037560150
-
Noroviruses bind to human ABO, lewis, and secretor histo-blood group antigens: Identification of 4 distinct strain-specific patterns
-
Huang P, Farkas T, Marionneau S, Zhong W, Ruvoen-Clouet N, Morrow AL, Altaye M, Pickering LK, Newburg DS, LePendu J, et al. 2003. Noroviruses bind to human ABO, Lewis, and secretor histo-blood group antigens: Identification of 4 distinct strain-specific patterns. J Infect Dis. 188:19-31.
-
(2003)
J Infect Dis
, vol.188
, pp. 19-31
-
-
Huang, P.1
Farkas, T.2
Marionneau, S.3
Zhong, W.4
Ruvoen-Clouet, N.5
Morrow, A.L.6
Altaye, M.7
Pickering, L.K.8
Newburg, D.S.9
Lependu, J.10
-
16
-
-
18744372741
-
Norovirus and histo-blood group antigens: Demonstration of a wide spectrum of strain specificities and classification of two major binding groups among multiple binding patterns
-
Huang P, Farkas T, Zhong W, Tan M, Thornton S, Morrow AL, Jiang X. 2005. Norovirus and histo-blood group antigens: Demonstration of a wide spectrum of strain specificities and classification of two major binding groups among multiple binding patterns. J Virol. 79:6714-6722.
-
(2005)
J Virol
, vol.79
, pp. 6714-6722
-
-
Huang, P.1
Farkas, T.2
Zhong, W.3
Tan, M.4
Thornton, S.5
Morrow, A.L.6
Jiang, X.7
-
17
-
-
23044434943
-
Norwalk virus infection associates with secretor status genotyped from sera
-
Hutson AM, Airaud F, LePendu J, Estes MK, Atmar RL. 2005. Norwalk virus infection associates with secretor status genotyped from sera. J Med Virol. 77:116-120.
-
(2005)
J Med Virol
, vol.77
, pp. 116-120
-
-
Hutson, A.M.1
Airaud, F.2
Lependu, J.3
Estes, M.K.4
Atmar, R.L.5
-
18
-
-
2542472337
-
Norovirus disease: Changing epidemiology and host susceptibility factors
-
Hutson AM, Atmar RL, Estes MK. 2004. Norovirus disease: Changing epidemiology and host susceptibility factors. Trends Microbiol. 12:279-287.
-
(2004)
Trends Microbiol
, vol.12
, pp. 279-287
-
-
Hutson, A.M.1
Atmar, R.L.2
Estes, M.K.3
-
19
-
-
0036569142
-
Norwalk virus infection and disease is associated with ABO histo-blood group type
-
Hutson AM, Atmar RL, Graham DY, Estes MK. 2002. Norwalk virus infection and disease is associated with ABO histo-blood group type. J Infect Dis. 185:1335-1337.
-
(2002)
J Infect Dis
, vol.185
, pp. 1335-1337
-
-
Hutson, A.M.1
Atmar, R.L.2
Graham, D.Y.3
Estes, M.K.4
-
20
-
-
0029063006
-
The X-ray structure of an anti-tumour antibody in complex with antigen
-
Jeffrey PD, Bajorath J, Chang CY, Yelton D, Hellstrom I, Hellstrom KE, Sheriff S. 1995. The X-ray structure of an anti-tumour antibody in complex with antigen. Nat Struct Biol. 2:466-471.
-
(1995)
Nat Struct Biol
, vol.2
, pp. 466-471
-
-
Jeffrey, P.D.1
Bajorath, J.2
Chang, C.Y.3
Yelton, D.4
Hellstrom, I.5
Hellstrom, K.E.6
Sheriff, S.7
-
21
-
-
39049147617
-
GLYCAM06: A generalizable biomolecular force field: Carbohydrates
-
Kirschner KN, Yongye AB, Tschampel SM, Gonzalez-Outeirino J, Daniels CR, Foley BL, Woods RJ. 2008. GLYCAM06: A generalizable biomolecular force field: Carbohydrates. J Comput Chem. 29:622-655.
-
(2008)
J Comput Chem
, vol.29
, pp. 622-655
-
-
Kirschner, K.N.1
Yongye, A.B.2
Tschampel, S.M.3
Gonzalez-Outeirino, J.4
Daniels, C.R.5
Foley, B.L.6
Woods, R.J.7
-
22
-
-
77953310001
-
Computational studies on the interaction of abo-active saccharides with the norovirus va387 capsid protein can explain experimental binding data
-
Koppisetty CAK, Nasir W, Strino F, Rydell GE, Larson G, Nyholm P-G. 2010. Computational studies on the interaction of ABO-active saccharides with the norovirus VA387 capsid protein can explain experimental binding data. J Comput Aided Mol Des. 24:423-431.
-
(2010)
J Comput Aided Mol des
, vol.24
, pp. 423-431
-
-
Koppisetty, C.A.K.1
Nasir, W.2
Strino, F.3
Rydell, G.E.4
Larson, G.5
Nyholm, P.-G.6
-
23
-
-
39849097577
-
Mechanisms of GII.4 norovirus persistence in human populations
-
Lindesmith LC, Donaldson EF, Lobue AD, Cannon JL, Zheng DP, Vinje J, Baric RS. 2008. Mechanisms of GII.4 norovirus persistence in human populations. PLoS Med. 5:e31.
-
(2008)
PLoS Med
, vol.5
-
-
Lindesmith, L.C.1
Donaldson, E.F.2
Lobue, A.D.3
Cannon, J.L.4
Zheng, D.P.5
Vinje, J.6
Baric, R.S.7
-
24
-
-
0038239855
-
Human susceptibility and resistance to norwalk virus infection
-
Lindesmith L, Moe C, Marionneau S, Ruvoen N, Jiang X, Lindblad L, Stewart P, LePendu J, Baric R. 2003. Human susceptibility and resistance to Norwalk virus infection. Nat Med. 9:548-553.
-
(2003)
Nat Med
, vol.9
, pp. 548-553
-
-
Lindesmith, L.1
Moe, C.2
Marionneau, S.3
Ruvoen, N.4
Jiang, X.5
Lindblad, L.6
Stewart, P.7
Lependu, J.8
Baric, R.9
-
25
-
-
0037237485
-
Viral gastroenteritis outbreaks in europe, 1995-2000
-
Lopman BA, Reacher MH, Van Duijnhoven Y, Hanon FX, Brown D, Koopmans M. 2003. Viral gastroenteritis outbreaks in Europe, 1995-2000. Emerg Infect Dis. 9:90-96.
-
(2003)
Emerg Infect Dis
, vol.9
, pp. 90-96
-
-
Lopman, B.A.1
Reacher, M.H.2
Van Duijnhoven, Y.3
Hanon, F.X.4
Brown, D.5
Koopmans, M.6
-
26
-
-
13444283836
-
Carbohydrate structure suite (CSS): Analysis of carbohydrate 3D structures derived from the PDB
-
Lutteke T, Frank M, von der Lieth CW. 2005. Carbohydrate Structure Suite (CSS): Analysis of carbohydrate 3D structures derived from the PDB. Nucl Acids Res. 33:D242-D246.
-
(2005)
Nucl Acids Res
, vol.33
-
-
Lutteke, T.1
Frank, M.2
Von Der Lieth, C.W.3
-
27
-
-
34547759863
-
High-throughput carbohydrate microarray profiling of 27 antibodies demonstrates widespread specificity problems
-
Manimala JC, Roach TA, Li Z, Gildersleeve JC. 2007. High-throughput carbohydrate microarray profiling of 27 antibodies demonstrates widespread specificity problems. Glycobiology. 17:17C-23C.
-
(2007)
Glycobiology
, vol.17
-
-
Manimala, J.C.1
Roach, T.A.2
Li, Z.3
Gildersleeve, J.C.4
-
28
-
-
0036082706
-
Norwalk virus binds to histo-blood group antigens present on gastroduodenal epithelial cells of secretor individuals
-
Marionneau S, Ruvoen N, Le Moullac-Vaidye B, Clement M, Cailleau-Thomas A, Ruiz-Palacois G, Huang P, Jiang X, Le Pendu J. 2002. Norwalk virus binds to histo-blood group antigens present on gastroduodenal epithelial cells of secretor individuals. Gastroenterology. 122:1967-1977.
-
(2002)
Gastroenterology
, vol.122
, pp. 1967-1977
-
-
Marionneau, S.1
Ruvoen, N.2
Le Moullac-Vaidye, B.3
Clement, M.4
Cailleau-Thomas, A.5
Ruiz-Palacois, G.6
Huang, P.7
Jiang, X.8
Le Pendu, J.9
-
29
-
-
34147142412
-
Diversity of viruses associated with acute gastroenteritis in children hospitalized with diarrhea in ho Chi Minh city, Vietnam
-
Nguyen TA, Yagyu F, Okame M, Phan TG, Trinh QD, Yan H, Hoang KT, Cao AT, Le Hoang P, Okitsu S, et al. 2007. Diversity of viruses associated with acute gastroenteritis in children hospitalized with diarrhea in Ho Chi Minh City, Vietnam. J Med Virol. 79:582-590.
-
(2007)
J Med Virol
, vol.79
, pp. 582-590
-
-
Nguyen, T.A.1
Yagyu, F.2
Okame, M.3
Phan, T.G.4
Trinh, Q.D.5
Yan, H.6
Hoang, K.T.7
Cao, A.T.8
Le Hoang, P.9
Okitsu, S.10
-
30
-
-
1842479952
-
Exploring protein native states and large-scale conformational changes with a modified generalized born model
-
Onufriev A, Bashford D, Case DA. 2004. Exploring protein native states and large-scale conformational changes with a modified generalized Born model. Proteins. 55:383-394.
-
(2004)
Proteins
, vol.55
, pp. 383-394
-
-
Onufriev, A.1
Bashford, D.2
Case, D.A.3
-
32
-
-
0033536662
-
X-ray crystallographic structure of the Norwalk virus capsid
-
Prasad BV, Hardy ME, Dokland T, Bella J, Rossmann MG, Estes MK. 1999. X-ray crystallographic structure of the Norwalk virus capsid. Science. 286:287-290.
-
(1999)
Science
, vol.286
, pp. 287-290
-
-
Prasad, B.V.1
Hardy, M.E.2
Dokland, T.3
Bella, J.4
Rossmann, M.G.5
Estes, M.K.6
-
33
-
-
3042561937
-
Structural convergence of antibody binding of carbohydrate determinants in lewis y tumor antigens
-
Ramsland PA, Farrugia W, Bradford TM, Mark Hogarth P, Scott AM. 2004. Structural convergence of antibody binding of carbohydrate determinants in Lewis Y tumor antigens. J Mol Biol. 340:809-818.
-
(2004)
J Mol Biol
, vol.340
, pp. 809-818
-
-
Ramsland, P.A.1
Farrugia, W.2
Bradford, T.M.3
Mark Hogarth, P.4
Scott, A.M.5
-
34
-
-
58949102115
-
Human noroviruses recognize sialyl lewis x neoglycoprotein
-
Rydell GE, Nilsson J, Rodriguez-Diaz J, Ruvoen-Clouet N, Svensson L, Le Pendu J, Larson G. 2009. Human noroviruses recognize sialyl Lewis x neoglycoprotein. Glycobiology. 19:309-320.
-
(2009)
Glycobiology
, vol.19
, pp. 309-320
-
-
Rydell, G.E.1
Nilsson, J.2
Rodriguez-Diaz, J.3
Ruvoen-Clouet, N.4
Svensson, L.5
Le Pendu, J.6
Larson, G.7
-
36
-
-
80052288988
-
Structural analysis of histo-blood group antigen binding specificity in a norovirus GII.4 epidemic variant: Implications for epochal evolution
-
Shanker S, Choi JM, Sankaran B, Atmar RL, Estes MK, Prasad BV. 2011. Structural analysis of histo-blood group antigen binding specificity in a norovirus GII.4 epidemic variant: Implications for epochal evolution. J Virol. 85:8635-8645.
-
(2011)
J Virol
, vol.85
, pp. 8635-8645
-
-
Shanker, S.1
Choi, J.M.2
Sankaran, B.3
Atmar, R.L.4
Estes, M.K.5
Prasad, B.V.6
-
37
-
-
55249114207
-
Noroviruses distinguish between type 1 and type 2 histo-blood group antigens for binding
-
Shirato H, Ogawa S, Ito H, Sato T, Kameyama A, Narimatsu H, Xiaofan Z, Miyamura T, Wakita T, Ishii K, et al. 2008. Noroviruses distinguish between type 1 and type 2 histo-blood group antigens for binding. J Virol. 82:10756-10767.
-
(2008)
J Virol
, vol.82
, pp. 10756-10767
-
-
Shirato, H.1
Ogawa, S.2
Ito, H.3
Sato, T.4
Kameyama, A.5
Narimatsu, H.6
Xiaofan, Z.7
Miyamura, T.8
Wakita, T.9
Ishii, K.10
-
38
-
-
43949095158
-
Outbreak studies of a GII-3 and a GII-4 norovirus revealed an association between HBGA phenotypes and viral infection
-
Tan M, Jin M, Xie H, Duan Z, Jiang X, Fang Z. 2008. Outbreak studies of a GII-3 and a GII-4 norovirus revealed an association between HBGA phenotypes and viral infection. J Med Virol. 80:1296-1301.
-
(2008)
J Med Virol
, vol.80
, pp. 1296-1301
-
-
Tan, M.1
Jin, M.2
Xie, H.3
Duan, Z.4
Jiang, X.5
Fang, Z.6
-
39
-
-
50349094342
-
Elucidation of strain-specific interaction of a GII-4 norovirus with HBGA receptors by site-directed mutagenesis study
-
Tan M, Xia M, Cao S, Huang P, Farkas T, Meller J, Hegde RS, Li X, Rao Z, Jiang X. 2008. Elucidation of strain-specific interaction of a GII-4 norovirus with HBGA receptors by site-directed mutagenesis study. Virology. 379:324-334.
-
(2008)
Virology
, vol.379
, pp. 324-334
-
-
Tan, M.1
Xia, M.2
Cao, S.3
Huang, P.4
Farkas, T.5
Meller, J.6
Hegde, R.S.7
Li, X.8
Rao, Z.9
Jiang, X.10
-
40
-
-
0001398008
-
How well does a restrained electrostatic potential (RESP) model perform in calculating conformational energies of organic and biological molecules?
-
Wang JM, Cieplak P, Kollman PA. 2000. How well does a restrained electrostatic potential (RESP) model perform in calculating conformational energies of organic and biological molecules? J Comput Chem. 21:1049-1074.
-
(2000)
J Comput Chem
, vol.21
, pp. 1049-1074
-
-
Wang, J.M.1
Cieplak, P.2
Kollman, P.A.3
|