-
1
-
-
33750965454
-
A phylogenetic analysis of the major groups of catfishes (Teleostei: Siluriformes) using rag1 and rag2 nuclear gene sequences
-
Sullivan J P, Lundberg J G &Hardman M, A phylogenetic analysis of the major groups of catfishes (Teleostei: Siluriformes) using rag1 and rag2 nuclear gene sequences, Mol Phylogen Evol, 41 (2006) 636-662.
-
(2006)
Mol Phylogen Evol
, vol.41
, pp. 636-662
-
-
Sullivan, J.P.1
Lundberg, J.G.2
Hardman, M.3
-
2
-
-
34047117751
-
Checklist of catfishes
-
Ferraris, C J Jr, Checklist of catfishes, recent and fossil (Osteichthyes: Siluriformes), and catalogue of siluriform primary types, Zootaxa, 1418 (2007) 1-628.
-
(2007)
recent and fossil (Osteichthyes: Siluriformes), and catalogue of siluriform primary types, Zootaxa
, vol.1418
, pp. 1-628
-
-
Ferraris Jr, C.J.1
-
3
-
-
77956841722
-
Mitochondrial ubiquinol-cytochrome c oxidoreductase
-
Bechmann G, Schulte U &Weiss H, Mitochondrial ubiquinol-cytochrome c oxidoreductase, in Molecular mechanisms in bioenergetics, edited by L Ernster. (Elsevier, Amsterdam) 1992, 199-216.
-
in Molecular mechanisms in bioenergetics, edited by L Ernster. (Elsevier, Amsterdam
, vol.1992
, pp. 199-216
-
-
Bechmann, G.1
Schulte, U.2
Weiss, H.3
-
4
-
-
84864301469
-
-
Bioenergetics (Academic Press, San Diego, California)
-
Nicholls D G &Ferguson S J, Bioenergetics (Academic Press, San Diego, California) 2002, 114-117.
-
(2002)
, pp. 114-117
-
-
Nicholls, D.G.1
Ferguson, S.J.2
-
5
-
-
0030867866
-
Crystal structure of the cytochrome BC1 complex from bovine heart mitochondria
-
Xia D, Yu C A, Kim H, Xia J Z, Kachurin A M et al, Crystal structure of the cytochrome BC1 complex from bovine heart mitochondria, Science, 277 (1997) 60-66.
-
(1997)
Science
, vol.277
, pp. 60-66
-
-
Xia, D.1
Yu, C.A.2
Kim, H.3
Xia, J.Z.4
Kachurin, A.M.5
-
6
-
-
40849120539
-
Mutation underlying resistance of Plasmodium berghei to atovaquone in the quinone binding domain 2 (Qo(2)) of the cytochrome b gene
-
Siregar J E, Syafruddin D, Matsuoka H, Kita K &Marzuki S, Mutation underlying resistance of Plasmodium berghei to atovaquone in the quinone binding domain 2 (Qo(2)) of the cytochrome b gene, Parasitol Int, 57 (2008) 229-232.
-
(2008)
Parasitol Int
, vol.57
, pp. 229-232
-
-
Siregar, J.E.1
Syafruddin, D.2
Matsuoka, H.3
Kita, K.4
Marzuki, S.5
-
7
-
-
0033873929
-
Comparative protein structure modeling of genes and genomes
-
Martí-Renom M A, Stuart A C, Fiser A, Sánchez R, Melo F et al, Comparative protein structure modeling of genes and genomes, Annu Rev Biophys Biomol Struct, 29 (2000) 291-325.
-
(2000)
Annu Rev Biophys Biomol Struct
, vol.29
, pp. 291-325
-
-
Martí-Renom, M.A.1
Stuart, A.C.2
Fiser, A.3
Sánchez, R.4
Melo, F.5
-
8
-
-
0033767942
-
Creating a structural genomics consortium
-
Williamson A R, Creating a structural genomics consortium, Nat Struct Biol, 7 (2000) 953.
-
(2000)
Nat Struct Biol
, vol.7
, pp. 953
-
-
Williamson, A.R.1
-
9
-
-
84864322519
-
In silico structure prediction of p27SJ, a novel protein in St John's Wort, that suppresses expression of HIV-1 genome
-
Gupta A, Pal S K, Narayan J &Potukuchi S M, In silico structure prediction of p27SJ, a novel protein in St John's Wort, that suppresses expression of HIV-1 genome, Biofrontiers, L (2009) 32-35.
-
(2009)
Biofrontiers
, vol.50
, pp. 32-35
-
-
Gupta, A.1
Pal, S.K.2
Narayan, J.3
Potukuchi, S.M.4
-
10
-
-
33847712625
-
Fishes of the genus Glyptothorax Blyth (Teleostei: Sisoridae) from Manipur, India, with description of three new species
-
Vishwanath W &Linthoingambi I, Fishes of the genus Glyptothorax Blyth (Teleostei: Sisoridae) from Manipur, India, with description of three new species, Zoos' Print J, 22 (2007) 2617-2626.
-
(2007)
Zoos' Print J
, vol.22
, pp. 2617-2626
-
-
Vishwanath, W.1
Linthoingambi, I.2
-
11
-
-
84864293197
-
-
Molecular cloning: A laboratory manual (Cold Spring Harbor Laboratory Press, New York)
-
Sambrook J, Fritsch E F &Maniatis T, Molecular cloning: A laboratory manual (Cold Spring Harbor Laboratory Press, New York) 1989.
-
(1989)
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
14
-
-
0027968068
-
Improving the sensitivity of progressive multiple sequence alignment through sequence weighting position specific gap penalties and weight matrix choice
-
Thompson J D, Higgins D G &Gibson T J, CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting position specific gap penalties and weight matrix choice, Nucleic Acids Res, 22 (1994) 4673-4680.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins D.G.Gibson, T.J.2
Clustal, W.3
-
15
-
-
0025183708
-
Basic local alignment search tool
-
Altschul S F, Gish W, Miller W, Myers E W &Lipman D J, Basic local alignment search tool, J Mol Biol, 215 (1990) 403-410.
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
16
-
-
34547781750
-
MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0
-
Tamura K, Dudley J, Nei M &Kumar S, MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0, Mol Biol Evol, 24 (2007) 1596-1599.
-
(2007)
Mol Biol Evol
, vol.24
, pp. 1596-1599
-
-
Tamura, K.1
Dudley, J.2
Nei, M.3
Kumar, S.4
-
17
-
-
0025005374
-
Calculation of protein extinction coefficients from amino acid sequence data
-
Gill S C &von Hippel P H, Calculation of protein extinction coefficients from amino acid sequence data, Anal Biochem, 189 (1989) 283.
-
(1989)
Anal Biochem
, vol.189
, pp. 283
-
-
Gill, S.C.1
von Hippel, P.H.2
-
18
-
-
0025612425
-
Correlation between stability of a protein and its dipeptide composition: A novel approach for predicting in vivo stability of a protein from its primary sequence
-
Guruprasad K, Reddy B V &Pandit M W, Correlation between stability of a protein and its dipeptide composition: A novel approach for predicting in vivo stability of a protein from its primary sequence, Protein Eng, 4 (1990) 155-161.
-
(1990)
Protein Eng
, vol.4
, pp. 155-161
-
-
Guruprasad, K.1
Reddy, B.V.2
Pandit, M.W.3
-
19
-
-
0020475449
-
A simple method for displaying the hydropathic character of a protein
-
Kyte J &Doolittle R F, A simple method for displaying the hydropathic character of a protein, J Mol Biol, 157 (1982) 105-132.
-
(1982)
J Mol Biol
, vol.157
, pp. 105-132
-
-
Kyte, J.1
Doolittle, R.F.2
-
20
-
-
0019287872
-
Thermostability and aliphatic index of globular proteins
-
Ikai A, Thermostability and aliphatic index of globular proteins, J Biochem, 88 (1980) 1895-1898.
-
(1980)
J Biochem
, vol.88
, pp. 1895-1898
-
-
Ikai, A.1
-
21
-
-
0036172167
-
Geno3D: Automatic comparative molecular modeling of protein
-
Combet C, Jambon M, Deléage G &Geourjon C, Geno3D: Automatic comparative molecular modeling of protein, Bioinformatics, 18 (2002) 213-214.
-
(2002)
Bioinformatics
, vol.18
, pp. 213-214
-
-
Combet, C.1
Jambon, M.2
Deléage, G.3
Geourjon, C.4
-
22
-
-
0035175679
-
PDBsum: Summaries and analyses of PDB structures
-
Laskowski R A, PDBsum: Summaries and analyses of PDB structures, Nucleic Acids Res, 29 (2001) 221-222.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 221-222
-
-
Laskowski, R.A.1
-
23
-
-
0029595442
-
SOPMA: Significant improvements in protein secondary structure prediction by consensus prediction from multiple alignments
-
Geourjon C &Deleage G, SOPMA: Significant improvements in protein secondary structure prediction by consensus prediction from multiple alignments, Comput Appl Biosci, 11 (1995) 681-684.
-
(1995)
Comput Appl Biosci
, vol.11
, pp. 681-684
-
-
Geourjon, C.1
Deleage, G.2
-
24
-
-
0043123167
-
Tools for comparative protein structure modeling and analysis
-
Eswar N, John B, Mirkovic N, Fiser A, Ilyin V A et al, Tools for comparative protein structure modeling and analysis, Nucleic Acids Res, 31 (2003) 3375-3380.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 3375-3380
-
-
Eswar, N.1
John, B.2
Mirkovic, N.3
Fiser, A.4
Ilyin, V.A.5
-
25
-
-
0008819754
-
The GROMOS biomolecular simulation program package
-
Walter R P S, Hünenberger P H, Tironi I G, Mark A E, Billetor S R et al, The GROMOS biomolecular simulation program package, J Phys Chem A, 103 (1999) 3596-3607.
-
(1999)
J Phys Chem A
, vol.103
, pp. 3596-3607
-
-
Walter, R.P.S.1
Hünenberger, P.H.2
Tironi, I.G.3
Mark, A.E.4
Billetor, S.R.5
-
26
-
-
0031473847
-
SWISS-MODEL and the Swiss- PdbViewer: An environment for comparative protein modeling
-
Guex N &Peitsch M C, SWISS-MODEL and the Swiss- PdbViewer: An environment for comparative protein modeling, Electrophoresis, 18 (1997) 2714-2723.
-
(1997)
Electrophoresis
, vol.18
, pp. 2714-2723
-
-
Guex, N.1
Peitsch, M.C.2
-
27
-
-
0000243829
-
PROCHECK: A program to check the stereochemical quality of protein structures
-
Laskowski R A, MacArthur M W, Moss D S &Thorton J M, PROCHECK: A program to check the stereochemical quality of protein structures, J Appl Cryst, 26 (1993) 283-291.
-
(1993)
J Appl Cryst
, vol.26
, pp. 283-291
-
-
Laskowski, R.A.1
MacArthur, M.W.2
Moss, D.S.3
Thorton, J.M.4
-
28
-
-
0025398721
-
WHAT IF: A molecular modeling and drug design program
-
Vriend G, WHAT IF: A molecular modeling and drug design program, J Mol Graph, 8 (1990) 52-56.
-
(1990)
J Mol Graph
, vol.8
, pp. 52-56
-
-
Vriend, G.1
-
29
-
-
0038634975
-
Improvement of the GenTHREADER method for genomic fold recognition
-
McGuffin L J &Jones D T, Improvement of the GenTHREADER method for genomic fold recognition, Bioinformatics, 19 (2003) 874-881.
-
(2003)
Bioinformatics
, vol.19
, pp. 874-881
-
-
McGuffin, L.J.1
Jones, D.T.2
-
30
-
-
0020475449
-
A simple method for displaying the hydropathic character of a protein
-
Kyte J &Doolittle R F, A simple method for displaying the hydropathic character of a protein, J Mol Biol, 157 (1982) 105-132.
-
(1982)
J Mol Biol
, vol.157
, pp. 105-132
-
-
Kyte, J.1
Doolittle, R.F.2
-
31
-
-
0026610767
-
Assessment of protein models with three dimensional profiles
-
Lüthy R, Bowie J U &Eisenberg D, Assessment of protein models with three dimensional profiles, Nature (Lond), 356 (1992) 83-85.
-
(1992)
Nature (Lond)
, vol.356
, pp. 83-85
-
-
Lüthy, R.1
Bowie, J.U.2
Eisenberg, D.3
-
32
-
-
0027180507
-
Verification of protein structures: Patterns of nonbonded atomic interactions
-
Colovos C &Yeates T O, Verification of protein structures: Patterns of nonbonded atomic interactions, Protein Sci, 2 (1993) 1511-1519.
-
(1993)
Protein Sci
, vol.2
, pp. 1511-1519
-
-
Colovos, C.1
Yeates, T.O.2
-
33
-
-
0037093644
-
Increasing the precision of comparative models with YASARA NOVA-A self-parameterizing force field
-
Krieger E, Koraimann G &Vriend G, Increasing the precision of comparative models with YASARA NOVA-A self-parameterizing force field, Proteins, 47 (2002) 393-402. 34 Castrignanò T, De Meo P D, Cozzetto D, Talamo I G &Tramontano A, The PMDB protein model database, Nucleic Acids Res, 34 (2006) D306-309.
-
(2002)
Proteins
, vol.47
, pp. 393-402
-
-
Krieger, E.1
Koraimann, G.2
Vriend, G.3
-
34
-
-
33644877685
-
The PMDB protein model database
-
Castrignanò T, De Meo P D, Cozzetto D, Talamo I G &Tramontano A, The PMDB protein model database, Nucleic Acids Res, 34 (2006) D306-309.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Cstrignanò, T.1
De Meo, P.D.2
Cozzetto, D.3
Talamo, I.G.4
Tramontano, A.5
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