-
1
-
-
54849414207
-
A hybrid zone provides evidence for incipient ecological speciation in Heliconius butterflies
-
Arias CF, Muñoz AG, Jiggins CD, Mavárez J, Bermingham E, Linares M, (2008) A hybrid zone provides evidence for incipient ecological speciation in Heliconius butterflies. Molecular Ecology, 17, 4699-4712.
-
(2008)
Molecular Ecology
, vol.17
, pp. 4699-4712
-
-
Arias, C.F.1
Muñoz, A.G.2
Jiggins, C.D.3
Mavárez, J.4
Bermingham, E.5
Linares, M.6
-
2
-
-
0000601479
-
Genealogical perspectives on the species problem
-
(eds Hoch P.C. and Stephenson A.G.), Missouri Botanical Garden, St. Louis, Missouri.
-
Baum D, Shaw KL, (1995) Genealogical perspectives on the species problem. In: Experimental and Molecular Approaches to Plant Biosystematics (eds, Hoch PC, and, Stephenson AG,), pp. 289-303. Missouri Botanical Garden, St. Louis, Missouri.
-
(1995)
Experimental and Molecular Approaches to Plant Biosystematics
, pp. 289-303
-
-
Baum, D.1
Shaw, K.L.2
-
3
-
-
65849163000
-
Learning about modes of speciation by computational approaches
-
Becquet C, Przeworski M, (2009) Learning about modes of speciation by computational approaches. Evolution, 63, 2547-2562.
-
(2009)
Evolution
, vol.63
, pp. 2547-2562
-
-
Becquet, C.1
Przeworski, M.2
-
4
-
-
67649425415
-
Variable progress toward ecological speciation in parapatry: Stickleback across eight lake-stream transitions
-
Berner D, Grandchamp A, Hendry A, (2009) Variable progress toward ecological speciation in parapatry: stickleback across eight lake-stream transitions. Evolution, 63, 1740-1753.
-
(2009)
Evolution
, vol.63
, pp. 1740-1753
-
-
Berner, D.1
Grandchamp, A.2
Hendry, A.3
-
5
-
-
0028303111
-
Rapid morphological radiation and convergence among races of the butterfly Heliconius erato inferred from patterns of mitochondrial DNA evolution
-
DOI 10.1073/pnas.91.14.6491
-
Brower AVZ, (1994) Rapid morphological radiation and convergence among races of the butterfly Heliconicus erato inferred from patterns of mitochondrial DNA evolution. Proceedings of the National Academy of Sciences of the United States of America, 91, 6491-6495. (Pubitemid 24200687)
-
(1994)
Proceedings of the National Academy of Sciences of the United States of America
, vol.91
, Issue.14
, pp. 6491-6495
-
-
Brower, A.V.Z.1
-
6
-
-
53849128215
-
Comparison of species tree methods for reconstructing the phylogeny of bearded manakins (Aves: Pipridae, Manacus) from multilocus sequence data
-
Brumfield RT, Liu L, Lum DE, Edwards SV, (2008) Comparison of species tree methods for reconstructing the phylogeny of bearded manakins (Aves: Pipridae, Manacus) from multilocus sequence data. Systematic Biology, 57, 719-731.
-
(2008)
Systematic Biology
, vol.57
, pp. 719-731
-
-
Brumfield, R.T.1
Liu, L.2
Lum, D.E.3
Edwards, S.V.4
-
7
-
-
34548098061
-
Empirical study of hybrid zone movement
-
DOI 10.1038/sj.hdy.6800997, PII 6800997
-
Buggs RJA, (2007) Empirical study of hybrid zone movement. Heredity, 99, 301-312. (Pubitemid 47295860)
-
(2007)
Heredity
, vol.99
, Issue.3
, pp. 301-312
-
-
Buggs, R.J.A.1
-
8
-
-
33745311464
-
Polyphyly and gene flow between non-sibling Heliconius species
-
Bull V, Beltrán M, Jiggins CD, McMillan WO, Bermingham E, Mallet J, (2006) Polyphyly and gene flow between non-sibling Heliconius species. BMC Biology, 4, 11.
-
(2006)
BMC Biology
, vol.4
, pp. 11
-
-
Bull, V.1
Beltrán, M.2
Jiggins, C.D.3
McMillan, W.O.4
Bermingham, E.5
Mallet, J.6
-
9
-
-
49249110563
-
Molecules, morphology and fossils: A comprehensive approach to odonate phylogeny and the evolution of the odonate wing
-
Bybee SM, Ogden TH, Branham MA, Whiting MF, (2008) Molecules, morphology and fossils: a comprehensive approach to odonate phylogeny and the evolution of the odonate wing. Cladistics, 24, 477-514.
-
(2008)
Cladistics
, vol.24
, pp. 477-514
-
-
Bybee, S.M.1
Ogden, T.H.2
Branham, M.A.3
Whiting, M.F.4
-
10
-
-
33846551902
-
Shifting distributions and speciation: Species divergence during rapid climate change
-
DOI 10.1111/j.1365-294X.2006.03167.x
-
Carstens BC, Knowles LL, (2007) Shifting distributions and speciation: species divergence during rapid climate change. Molecular Ecology, 16, 619-627. (Pubitemid 46161083)
-
(2007)
Molecular Ecology
, vol.16
, Issue.3
, pp. 619-627
-
-
Carstens, B.C.1
Knowles, L.L.2
-
12
-
-
3042750437
-
-
Sinauer Associates Inc, Sunderland, Massachusetts.
-
Coyne JA, Orr HA, (2004) Speciation. Sinauer Associates Inc, Sunderland, Massachusetts.
-
(2004)
Speciation
-
-
Coyne, J.A.1
Orr, H.A.2
-
13
-
-
0020869892
-
Species concepts and speciation analysis
-
Cracraft J, (1983) Species concepts and speciation analysis. Current Ornithology, 1, 159-187.
-
(1983)
Current Ornithology
, vol.1
, pp. 159-187
-
-
Cracraft, J.1
-
14
-
-
38649110663
-
BEAST: Bayesian evolutionary analysis by 629 sampling trees
-
Drummond AJ, Rambaut A, (2007) BEAST: bayesian evolutionary analysis by 629 sampling trees. BMC Evolutionary Biology, 7, 214.
-
(2007)
BMC Evolutionary Biology
, vol.7
, pp. 214
-
-
Drummond, A.J.1
Rambaut, A.2
-
15
-
-
0024909552
-
Life cycle, production, microdistribution and diet of the damselfly Euphaea decorata (Odonata: Euphaeidae) in a Hong Kong forest stream
-
Dudgeon D, (1989) Life cycle, production, microdistribution and diet of the damselfly Euphaea decorata (Odonata: Euphaeidae) in a Hong Kong forest stream. Journal of Zoology, 217, 57-72. (Pubitemid 20418390)
-
(1989)
Journal of Zoology
, vol.217
, Issue.1
, pp. 57-72
-
-
Dudgeon, D.1
-
16
-
-
79959300621
-
Applications of next generation sequencing in molecular ecology of non-model organisms
-
Ekblom R, Galindo J, (2010) Applications of next generation sequencing in molecular ecology of non-model organisms. Heredity, 107, 1-15.
-
(2010)
Heredity
, vol.107
, pp. 1-15
-
-
Ekblom, R.1
Galindo, J.2
-
17
-
-
0033911640
-
Hitchhiking under positive Darwinian selection
-
Fay JC, Wu CI, (2000) Hitchhiking under positive Darwinian selection. Genetics, 155, 1405-1413. (Pubitemid 30463447)
-
(2000)
Genetics
, vol.155
, Issue.3
, pp. 1405-1413
-
-
Fay, J.C.1
Wu, C.-I.2
-
18
-
-
0242416123
-
Perspective: Models of speciation - What have we learned in 40 years?
-
Gavrilets S, (2003) Perspective: models of speciation: what have we learned in 40 years? Evolution, 57, 2197-2215. (Pubitemid 37388014)
-
(2003)
Evolution
, vol.57
, Issue.10
, pp. 2197-2215
-
-
Gavrilets, S.1
-
20
-
-
0025229634
-
Convergence of insular dwarfism in damselflies (Euphaea) and dobsonflies (Protohermes)
-
Hayashi F, (1990) Convergence of insular dwarfism in damselflies (Euphaea) and dobsonflies (Protohermes). Freshwater Biology, 23, 219-231. (Pubitemid 20427874)
-
(1990)
Freshwater Biology
, vol.23
, Issue.2
, pp. 219-231
-
-
Hayashi, F.1
-
21
-
-
77249086587
-
Bayesian inference of species trees from multilocus data
-
Heled J, Drummond AJ, (2010) Bayesian inference of species trees from multilocus data. Molecular Biology and Evolution, 27, 570-580.
-
(2010)
Molecular Biology and Evolution
, vol.27
, pp. 570-580
-
-
Heled, J.1
Drummond, A.J.2
-
22
-
-
0034702196
-
The genetic legacy of the Quaternary ice ages
-
Hewitt GM, (2000) The genetic legacy of the Quaternary ice ages. Nature, 405, 907-913.
-
(2000)
Nature
, vol.405
, pp. 907-913
-
-
Hewitt, G.M.1
-
23
-
-
33750942467
-
Recent advances in assessing gene flow between diverging populations and species
-
DOI 10.1016/j.gde.2006.10.005, PII S0959437X06002048, Genomes and Evolution
-
Hey J, (2006) Recent advances in assessing gene flow between diverging populations and species. Current Opinion in Genetics & Development, 16, 592-596. (Pubitemid 44738527)
-
(2006)
Current Opinion in Genetics and Development
, vol.16
, Issue.6
, pp. 592-596
-
-
Hey, J.1
-
24
-
-
77952297997
-
The divergence of chimpanzee species and subspecies as revealed in multi-population isolation-with-migration analyses
-
Hey J, (2010) The divergence of chimpanzee species and subspecies as revealed in multi-population isolation-with-migration analyses. Molecular Biology and Evolution, 27, 921-933.
-
(2010)
Molecular Biology and Evolution
, vol.27
, pp. 921-933
-
-
Hey, J.1
-
25
-
-
3142714474
-
Multilocus methods for estimating population sizes, migration rates and divergence time, with applications to the divergence of Drosophila pseudoobscura and D. persimilis
-
DOI 10.1534/genetics.103.024182
-
Hey J, Nielsen R, (2004) Multilocus methods for estimating population sizes, migration rates and divergence time, with applications to the divergence of Drosophila pseudoobscura and D. persimilis. Genetics, 167, 747-760. (Pubitemid 38931862)
-
(2004)
Genetics
, vol.167
, Issue.2
, pp. 747-760
-
-
Hey, J.1
Nielsen, R.2
-
26
-
-
33847253975
-
Integration within the Felsenstein equation for improved Markov chain Monte Carlo methods in population genetics
-
DOI 10.1073/pnas.0611164104
-
Hey J, Nielsen R, (2007) Integration within the Felsenstein equation for improved Markov chain Monte Carlo methods in population genetics. Proceedings of the National Academy of Sciences of the United States of America, 104, 2785-2790. (Pubitemid 46327957)
-
(2007)
Proceedings of the National Academy of Sciences of the United States of America
, vol.104
, Issue.8
, pp. 2785-2790
-
-
Hey, J.1
Nielsen, R.2
-
27
-
-
0031035812
-
A coalescent estimator of the population recombination rate
-
Hey J, Wakeley J, (1997) A coalescent estimator of the population recombination rate. Genetics, 145, 833-846. (Pubitemid 27108037)
-
(1997)
Genetics
, vol.145
, Issue.3
, pp. 833-846
-
-
Hey, J.1
Wakeley, J.2
-
28
-
-
78149375687
-
Amazonia through time: Andean uplift, climate change, landscape evolution, and biodiversity
-
Hoorn C, Wesselingh FP, ter Steege H, et al. (2010) Amazonia through time: Andean uplift, climate change, landscape evolution, and biodiversity. Science, 330, 927-931.
-
(2010)
Science
, vol.330
, pp. 927-931
-
-
Hoorn, C.1
Wesselingh, F.P.2
Ter Steege, H.3
-
29
-
-
79953845046
-
Lineage-specific late Pleistocene expansion of an endemic subtropical gossamer-wing damselfly, Euphaea formosa, in Taiwan
-
Huang JP, Lin CP, (2011) Lineage-specific late Pleistocene expansion of an endemic subtropical gossamer-wing damselfly, Euphaea formosa, in Taiwan. BMC Evolutionary Biology, 11, 94.
-
(2011)
BMC Evolutionary Biology
, vol.11
, pp. 94
-
-
Huang, J.P.1
Lin, C.P.2
-
30
-
-
68949103876
-
Inferring weak population structure with the assistance of sample group information
-
Hubisz M, Falush D, Stephens M, Pritchard J, (2009) Inferring weak population structure with the assistance of sample group information. Molecular Ecology Resources, 9, 1322-1332.
-
(2009)
Molecular Ecology Resources
, vol.9
, pp. 1322-1332
-
-
Hubisz, M.1
Falush, D.2
Stephens, M.3
Pritchard, J.4
-
31
-
-
0023612034
-
Estimating the recombination parameter of a finite population model without selection
-
Hudson RR, (1987) Estimating the recombination parameter of a finite population model without selection. Genetical Research, 50, 245-250. (Pubitemid 18042123)
-
(1987)
Genetical Research
, vol.50
, Issue.3
, pp. 245-250
-
-
Hudson, R.R.1
-
32
-
-
0022211482
-
Statistical properties of the number of recombination events in the history of a sample of DNA sequences
-
Hudson RR, Kaplan NL, (1985) Statistical properties of the number of recombination events in the history of a sample of DNA sequences. Genetics, 111, 147-164. (Pubitemid 16248827)
-
(1985)
Genetics
, vol.111
, Issue.1
, pp. 147-164
-
-
Hudson, R.R.1
Kaplan, N.L.2
-
33
-
-
0023339852
-
A test of neutral molecular evolution based on nucleotide data
-
Hudson RR, Kreitman M, Aguade M, (1987) A test of neutral molecular evolution based on nucleotide data. Genetics, 116, 153-159.
-
(1987)
Genetics
, vol.116
, pp. 153-159
-
-
Hudson, R.R.1
Kreitman, M.2
Aguade, M.3
-
34
-
-
0026709389
-
Estimation of levels of gene flow from DNA sequence data
-
Hudson RR, Slatkin M, Maddison WP, (1992) Estimation of levels of gene flow from DNA sequence data. Genetics, 132, 583-589.
-
(1992)
Genetics
, vol.132
, pp. 583-589
-
-
Hudson, R.R.1
Slatkin, M.2
Maddison, W.P.3
-
35
-
-
0034849408
-
MRBAYES: Bayesian inference of phylogenetic trees
-
Huelsenbeck JP, Ronquist F, (2001) MrBayes v. 3.12: bayesian inference of phylogeny. Bioinformatics, 17, 754-755. (Pubitemid 32851390)
-
(2001)
Bioinformatics
, vol.17
, Issue.8
, pp. 754-755
-
-
Huelsenbeck, J.P.1
Ronquist, F.2
-
36
-
-
0037291474
-
Molecular systematics and adaptive radiation of Hawaii's endemic damselfly genus Megalagrion (Odonata: Coenagrionidae)
-
Jordan S, Simon C, Polhemus D, (2003) Molecular systematics and adaptive radiation of Hawaii's endemic damselfly genus Megalagrion (Odonata: Coenagrionidae). Systematic Biology, 52, 89-109. (Pubitemid 36300062)
-
(2003)
Systematic Biology
, vol.52
, Issue.1
, pp. 89-109
-
-
Jordan, S.1
Simon, C.2
Polhemus, D.3
-
37
-
-
0014494672
-
The number of heterozygous nucleotide sites maintained in a finite population due to steady flux of mutations
-
Kimura M, (1969) The number of heterozygous nucleotide sites maintained in a finite population due to steady flux of mutations. Genetics, 61, 893-903.
-
(1969)
Genetics
, vol.61
, pp. 893-903
-
-
Kimura, M.1
-
38
-
-
0033823253
-
Tests of Pleistocene speciation in montane grasshoppers (Genus Melanopus) from the sky islands of western North America
-
Knowles LL, (2000) Tests of Pleistocene speciation in montane grasshoppers (Genus Melanopus) from the sky islands of western North America. Evolution, 54, 1337-1348.
-
(2000)
Evolution
, vol.54
, pp. 1337-1348
-
-
Knowles, L.L.1
-
39
-
-
38849165216
-
Divergence with gene flow between Ponto-Caspian refugia in an anadromous cyprinid Rutilus frisii revealed by multiple gene phylogeography
-
DOI 10.1111/j.1365-294X.2007.03638.x
-
Kotlik P, Markova S, Choleva L, et al. (2008) Divergence with gene flow between Ponto-Caspian refugia in an anadromous cyprinid Rutilus frisii revealed by multiple gene phylogeography. Molecular Ecology, 17, 1076-1088. (Pubitemid 351197365)
-
(2008)
Molecular Ecology
, vol.17
, Issue.4
, pp. 1076-1088
-
-
Kotlik, P.1
Markova, S.2
Choleva, L.3
Bogutskaya, N.G.4
Ekmekci, F.G.5
Ivanova, P.P.6
-
40
-
-
37249055494
-
Phylogeny, divergence times and species limits of spiny lizards (Sceloporus magister species group) in western North American deserts and Baja California
-
DOI 10.1111/j.1365-294X.2007.03556.x
-
Leaché A, Mulcahy D, (2007) Phylogeny, divergence times and species limits of spiny lizards (Sceloporus magister species group) in western North American deserts and Baja California. Molecular Ecology, 16, 5216-5233. (Pubitemid 350265255)
-
(2007)
Molecular Ecology
, vol.16
, Issue.24
, pp. 5216-5233
-
-
Leache, A.D.1
Mulcahy, D.G.2
-
41
-
-
84864285713
-
Morphometric and genetic differentiation of two sibling gossamer-wing damselflies, Euphaea formosa and E. yayeyamana (Insecta, Odonata, Euphaeidae), and adaptive trait divergence in subtropical East Asian islands
-
Lee YH, Lin CP, (2012) Morphometric and genetic differentiation of two sibling gossamer-wing damselflies, Euphaea formosa and E. yayeyamana (Insecta, Odonata, Euphaeidae), and adaptive trait divergence in subtropical East Asian islands. Journal of Insect Science, 12, 53.
-
(2012)
Journal of Insect Science
, vol.12
, pp. 53
-
-
Lee, Y.H.1
Lin, C.P.2
-
42
-
-
0036532087
-
Gene flow and the limits to natural selection
-
DOI 10.1016/S0169-5347(02)02497-7, PII S0169534701024326
-
Lenormand T, (2002) Gene flow and the limits to natural selection. Trends in Ecology and Evolution, 17, 183-189. (Pubitemid 34219312)
-
(2002)
Trends in Ecology and Evolution
, vol.17
, Issue.4
, pp. 183-189
-
-
Lenormand, T.1
-
43
-
-
74549125447
-
Rejecting strictly allopatric speciation on a continental island: Prolonged postdivergence gene flow between Taiwan (Leucodioptron taewanus, Passeriformes Timaliidae) and Chinese (L. canorum canorum) hwameis
-
Li JW, Yeung CKL, Tsai PW, et al. (2010) Rejecting strictly allopatric speciation on a continental island: prolonged postdivergence gene flow between Taiwan (Leucodioptron taewanus, Passeriformes Timaliidae) and Chinese (L. canorum canorum) hwameis. Molecular Ecology, 19, 494-507.
-
(2010)
Molecular Ecology
, vol.19
, pp. 494-507
-
-
Li, J.W.1
Yeung, C.K.L.2
Tsai, P.W.3
-
44
-
-
65649117685
-
DnaSP v. 5: A software for comprehensive analysis of DNA polymorphism data
-
Librado P, Rozas J, (2009) DnaSP v. 5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics, 25, 1451-1452.
-
(2009)
Bioinformatics
, vol.25
, pp. 1451-1452
-
-
Librado, P.1
Rozas, J.2
-
45
-
-
0038364009
-
Phylogenetic comparative methods and the geography of speciation
-
DOI 10.1016/S0169-5347(03)00037-5
-
Losos JB, Glor RE, (2003) Phylogenetic comparative methods and the geography of speciation. Trends in Ecology and Evolution, 18, 220-227. (Pubitemid 36551226)
-
(2003)
Trends in Ecology and Evolution
, vol.18
, Issue.5
, pp. 220-227
-
-
Losos, J.B.1
Glor, R.E.2
-
46
-
-
0031504952
-
Gene trees in species trees
-
Maddison W, (1997) Gene trees in species trees. Systematic Biology, 46, 523-536.
-
(1997)
Systematic Biology
, vol.46
, pp. 523-536
-
-
Maddison, W.1
-
47
-
-
0028975790
-
A species definition for the modern synthesis
-
Mallet J, (1995) A species definition for the modern synthesis. Trends in Ecology and Evolution, 10, 294-299.
-
(1995)
Trends in Ecology and Evolution
, vol.10
, pp. 294-299
-
-
Mallet, J.1
-
48
-
-
84864278328
-
Descriptions of the larvae of three families of Zygoptera breeding in the streams of Taiwan
-
Matsuki K, Lien JC, (1978) Descriptions of the larvae of three families of Zygoptera breeding in the streams of Taiwan. Tombo, 21, 15-26.
-
(1978)
Tombo
, vol.21
, pp. 15-26
-
-
Matsuki, K.1
Lien, J.C.2
-
49
-
-
84864280017
-
The euphaeid fauna of Taiwan (Odonata)
-
(in Japanese).
-
Matsuki K, Lien JC, (1984) The euphaeid fauna of Taiwan (Odonata). Rhopalocerists' Magazine, 7, 15-22 (in Japanese).
-
(1984)
Rhopalocerists' Magazine
, vol.7
, pp. 15-22
-
-
Matsuki, K.1
Lien, J.C.2
-
50
-
-
0002175468
-
Changes in genetic environment and evolution
-
(eds Huxley J.S. Hardy A.C. and Ford E.B.), Allen and Unwin, London.
-
Mayr E, (1954) Changes in genetic environment and evolution. In: Evolution as a Process (eds, Huxley JS, Hardy AC, and, Ford EB,), pp. 157-180. Allen and Unwin, London.
-
(1954)
Evolution As A Process
, pp. 157-180
-
-
Mayr, E.1
-
51
-
-
0003401433
-
-
Harvard University Press, Cambridge, Massachusetts.
-
Mayr E, (1963) Animal Species and Evolution. Harvard University Press, Cambridge, Massachusetts.
-
(1963)
Animal Species and Evolution
-
-
Mayr, E.1
-
52
-
-
80054080637
-
Permanent Genetic Resources added to Molecular Ecology Resources Database 1 August 2011-30 September 2011
-
Molecular Ecology Resources Primer Development Consortium et al.
-
Molecular Ecology Resources Primer Development Consortium et al. (2011) Permanent Genetic Resources added to Molecular Ecology Resources Database 1 August 2011-30 September 2011. Molecular Ecology Resources.
-
(2011)
Molecular Ecology Resources
-
-
-
53
-
-
77952716372
-
Inter-specific gene flow dynamics during the Pleistocene-dated speciation of forest-dependent mosquitoes in Southeast Asia
-
Morgan K, Linton YM, Somboon P, et al. (2010) Inter-specific gene flow dynamics during the Pleistocene-dated speciation of forest-dependent mosquitoes in Southeast Asia. Molecular Ecology, 19, 2269-2285.
-
(2010)
Molecular Ecology
, vol.19
, pp. 2269-2285
-
-
Morgan, K.1
Linton, Y.M.2
Somboon, P.3
-
54
-
-
66149172352
-
Identification and dynamics of a cryptic suture zone in tropical rainforest
-
Moritz C, Hoskin CJ, MacKenzie JB, et al. (2009) Identification and dynamics of a cryptic suture zone in tropical rainforest. Proceedings of the Royal Society B: Biological Sciences, 276, 1235-1244.
-
(2009)
Proceedings of the Royal Society B: Biological Sciences
, vol.276
, pp. 1235-1244
-
-
Moritz, C.1
Hoskin, C.J.2
MacKenzie, J.B.3
-
55
-
-
0026725308
-
Rates of synonymous substitution and base composition of nuclear genes in Drosophila
-
Moriyama EN, Gojobori T, (1992) Rates of synonymous substitution and base composition of nuclear genes in Drosophila. Genetics, 130, 855-864.
-
(1992)
Genetics
, vol.130
, pp. 855-864
-
-
Moriyama, E.N.1
Gojobori, T.2
-
56
-
-
62349141971
-
Divergence in the face of gene flow: The case of two newts (Amphibia: Salamandridae)
-
Nadachowska K, Babik W, (2009) Divergence in the face of gene flow: the case of two newts (Amphibia: Salamandridae). Molecular Biology and Evolution, 26, 829-841.
-
(2009)
Molecular Biology and Evolution
, vol.26
, pp. 829-841
-
-
Nadachowska, K.1
Babik, W.2
-
57
-
-
0034967295
-
Distinguishing migration from isolation: A Markov chain Monte Carlo approach
-
Nielsen R, Wakeley J, (2001) Distinguishing migration from isolation: a Markov Chain Monte Carlo approach. Genetics, 158, 885-896. (Pubitemid 32552323)
-
(2001)
Genetics
, vol.158
, Issue.2
, pp. 885-896
-
-
Nielsen, R.1
Wakeley, J.2
-
58
-
-
42449106611
-
Recent divergence with gene flow in Tennessee cave salamanders (Plethodontidae: Gyrinophilus) inferred from gene genealogies
-
DOI 10.1111/j.1365-294X.2008.03750.x
-
Niemiller ML, Fitzpatrick BM, Miller BT, (2008) Recent divergence with gene flow in Tennessee cave salamanders (Plethodontidae: Gyrinophilus) inferred from gene genealogies. Molecular Ecology, 17, 2258-2275. (Pubitemid 351562812)
-
(2008)
Molecular Ecology
, vol.17
, Issue.9
, pp. 2258-2275
-
-
Niemiller, M.L.1
Fitzpatrick, B.M.2
Miller, B.T.3
-
59
-
-
0033504552
-
The parsimony ratchet, a new method for rapid parsimony analysis
-
DOI 10.1006/clad.1999.0121
-
Nixon KC, (1999) The parsimony ratchet, a new method for rapid parsimony analysis. Cladistics, 15, 407-414. (Pubitemid 30203167)
-
(1999)
Cladistics
, vol.15
, Issue.4
, pp. 407-414
-
-
Nixon, K.C.1
-
60
-
-
42449144387
-
Speciation with gene flow could be common
-
DOI 10.1111/j.1365-294X.2008.03715.x
-
Nosil P, (2008) Speciation with gene flow could be common. Molecular Ecology, 17, 2103-2106. (Pubitemid 351562798)
-
(2008)
Molecular Ecology
, vol.17
, Issue.9
, pp. 2103-2106
-
-
Nosil, P.1
-
61
-
-
13744253303
-
Inferring the mode of speciation from genomic data: A study of the great apes
-
DOI 10.1534/genetics.104.029231
-
Osada N, Wu CI, (2005) Inferring the mode of speciation from genomic data: a study of the great apes. Genetics, 169, 259-264. (Pubitemid 40239168)
-
(2005)
Genetics
, vol.169
, Issue.1
, pp. 259-264
-
-
Osada, N.1
Wu, C.-I.2
-
62
-
-
0001637585
-
Geographic Patterns of Endemism and Speciation in Amphibians and Reptiles of the Ryukyu Archipelago, Japan, with Special Reference to their Paleogeographical Implications
-
Ota H, (1998) Geographic patterns of endemism and speciation in amphibians and reptiles of the Ryukyu Archipelago, Japan, with special reference to their paleogeographical implications. Researches on Population Ecology, 40, 189-204. (Pubitemid 128448751)
-
(1998)
Researches on Population Ecology
, vol.40
, Issue.2
, pp. 189-204
-
-
Ota, H.1
-
63
-
-
77953775759
-
Revisiting the insect mitochondrial molecular clock: The mid-aegean trench calibration
-
Papadopoulou A, Anastasiou I, Vogler AP, (2010) Revisiting the insect mitochondrial molecular clock: the mid-aegean trench calibration. Molecular Biology and Evolution, 27, 1659-1672.
-
(2010)
Molecular Biology and Evolution
, vol.27
, pp. 1659-1672
-
-
Papadopoulou, A.1
Anastasiou, I.2
Vogler, A.P.3
-
64
-
-
34547682316
-
Nuclear loci and coalescent methods support ancient hybridization as cause of mitochondrial paraphyly between gadwall and falcated duck (Anas spp.)
-
DOI 10.1111/j.1558-5646.2007.00149.x
-
Peters JL, Zhuravlev Y, Fefelov I, Logie A, Omland KE, (2007) Nuclear loci and coalescent methods support ancient hybridization as cause of mitochondrial paraphyly between gadwall and falcated duck (anas spp.). Evolution, 61, 1992-2006. (Pubitemid 47220929)
-
(2007)
Evolution
, vol.61
, Issue.8
, pp. 1992-2006
-
-
Peters, J.L.1
Zhuravlev, Y.2
Fefelov, I.3
Logie, A.4
Omland, K.E.5
-
65
-
-
78149383270
-
Divergence with gene flow: Models and data
-
Pinho C, Hey J, (2010) Divergence with gene flow: models and data. Annual Review of Ecology, Evolution, and Systematics, 41, 215-230.
-
(2010)
Annual Review of Ecology, Evolution, and Systematics
, vol.41
, pp. 215-230
-
-
Pinho, C.1
Hey, J.2
-
66
-
-
0033427504
-
Tropical paleoclimates at the Last Glacial Maximum: Comparison of Paleoclimate Modeling Intercomparison Project (PMIP) simulations and paleodata
-
DOI 10.1007/s003820050318
-
Pinot S, Ramstein G, Harrison SP, et al. (1999) Tropical paleoclimates at the last glacial maximum: comparison of Paleoclimate Modeling Intercomparison Project (PMIP) simulations and paleodata. Climate Dynamics, 15, 857-874. (Pubitemid 30042301)
-
(1999)
Climate Dynamics
, vol.15
, Issue.11
, pp. 857-874
-
-
Pinot, S.1
Ramstein, G.2
Harrison, S.P.3
Prentice, I.C.4
Guiot, J.5
Stute, M.6
Joussaume, S.7
-
67
-
-
45849154165
-
JModelTest: Phylogenetic model averaging
-
DOI 10.1093/molbev/msn083
-
Posada D, (2008) jModelTest: phylogenetic model averaging. Molecular Biology and Evolution, 25, 1253-1256. (Pubitemid 351882013)
-
(2008)
Molecular Biology and Evolution
, vol.25
, Issue.7
, pp. 1253-1256
-
-
Posada, D.1
-
68
-
-
0034118493
-
Inference of population structure using multilocus genotype data
-
Pritchard JK, Stephens M, Donnelly P, (2000) Inference of population structure using multilocus genotype data. Genetics, 155, 945-959. (Pubitemid 30397141)
-
(2000)
Genetics
, vol.155
, Issue.2
, pp. 945-959
-
-
Pritchard, J.K.1
Stephens, M.2
Donnelly, P.3
-
69
-
-
44249105411
-
Speciation timing and neotropical biodiversity: The Tertiary-Quaternary debate in the light of molecular phylogenetic evidence
-
DOI 10.1111/j.1365-294X.2008.03789.x
-
Rull V, (2008) Speciation timing and neotropical biodiversity: the Tertiary-Quaternary debate in the light of molecular phylogenetic evidence. Molecular Ecology, 17, 2722-2729. (Pubitemid 351724949)
-
(2008)
Molecular Ecology
, vol.17
, Issue.11
, pp. 2722-2729
-
-
Rull, V.1
-
70
-
-
80052706768
-
Neotropical biodiversity: Timing and potential drivers
-
Rull V, (2011) Neotropical biodiversity: timing and potential drivers. Trends in Ecology and Evolution, 26, 507-513.
-
(2011)
Trends in Ecology and Evolution
, vol.26
, pp. 507-513
-
-
Rull, V.1
-
71
-
-
0011773511
-
-
Distributed by the authors. Department of Ecology and Evolutionary Biology, University of Connecticut, Storrs, Connecticut.
-
Sikes DS, Lewis PO, (2001) PAUPRat: PAUP* Implementation of the Parsimony Ratchet. Distributed by the authors. Department of Ecology and Evolutionary Biology, University of Connecticut, Storrs, Connecticut.
-
(2001)
PAUPRat: PAUP* Implementation of the Parsimony Ratchet
-
-
Sikes, D.S.1
Lewis, P.O.2
-
72
-
-
0000674803
-
The biological species concept: A critical evaluation
-
Sokal RR, Crovello TJ, (1970) The biological species concept: a critical evaluation. American Naturalist, 104, 127-153.
-
(1970)
American Naturalist
, vol.104
, pp. 127-153
-
-
Sokal, R.R.1
Crovello, T.J.2
-
73
-
-
33750403801
-
RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
-
DOI 10.1093/bioinformatics/btl446
-
Stamatakis A, (2006) RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics, 22, 2688-2690. (Pubitemid 44642609)
-
(2006)
Bioinformatics
, vol.22
, Issue.21
, pp. 2688-2690
-
-
Stamatakis, A.1
-
74
-
-
0035071957
-
A new statistical method for haplotype reconstruction from population data
-
DOI 10.1086/319501
-
Stephens M, Smith N, Donnelly P, (2001) A new statistical method for haplotype reconstruction from population data. American Journal of Human Genetics, 68, 978-989. (Pubitemid 32289743)
-
(2001)
American Journal of Human Genetics
, vol.68
, Issue.4
, pp. 978-989
-
-
Stephens, M.1
Smith, N.J.2
Donnelly, P.3
-
75
-
-
74549151043
-
How robust are "isolation with migration" analyses to violations of the im model? A simulation study
-
Strasburg JL, Rieseberg LH, (2010) How robust are "isolation with migration" analyses to violations of the IM model? A simulation study. Molecular Biology and Evolution, 27, 297-310.
-
(2010)
Molecular Biology and Evolution
, vol.27
, pp. 297-310
-
-
Strasburg, J.L.1
Rieseberg, L.H.2
-
77
-
-
0024313579
-
Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
-
Tajima F, (1989) Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics, 123, 585-595. (Pubitemid 19274682)
-
(1989)
Genetics
, vol.123
, Issue.3
, pp. 585-595
-
-
Tajima, F.1
-
78
-
-
0027157960
-
Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees
-
Tamura K, Nei M, (1993) Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Molecular Biology and Evolution, 10, 512-526. (Pubitemid 23157236)
-
(1993)
Molecular Biology and Evolution
, vol.10
, Issue.3
, pp. 512-526
-
-
Tamura, K.1
Nei, M.2
-
79
-
-
79957613599
-
MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
-
Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S, (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution, 28, 2731-2739.
-
(2011)
Molecular Biology and Evolution
, vol.28
, pp. 2731-2739
-
-
Tamura, K.1
Peterson, D.2
Peterson, N.3
Stecher, G.4
Nei, M.5
Kumar, S.6
-
80
-
-
33845899683
-
The complex evolutionary history of gorillas: Insights from genomic data
-
DOI 10.1093/molbev/msl160
-
Thalmann O, Fischer A, Lankester F, Paabo S, Vigilant L, (2007) The complex evolutionary history of gorillas: insights from genomic data. Molecular Biology and Evolution, 24, 146-158. (Pubitemid 46026290)
-
(2007)
Molecular Biology and Evolution
, vol.24
, Issue.1
, pp. 146-158
-
-
Thalmann, O.H.1
Fischer, A.H.2
Lankester, F.H.3
Paabo, S.H.4
Vigilant, L.H.5
-
82
-
-
0034492377
-
Maps of Pleistocene sea levels in Southeast Asia: Shorelines, river systems and time durations
-
DOI 10.1046/j.1365-2699.2000.00489.x
-
Voris HK, (2000) Maps of Pleistocene sea levels in Southeast Asia: shorelines, river systems and time durations. Journal of Biogeography, 27, 1153-1167. (Pubitemid 32100812)
-
(2000)
Journal of Biogeography
, vol.27
, Issue.5
, pp. 1153-1167
-
-
Voris, H.K.1
-
83
-
-
79953775966
-
Speciation history of three closely related pines Pinus mugo (T.), P. uliginosa (N.) and P. sylvestris (L.)
-
Wachowiak W, Palmé AE, Savolainen O, (2011) Speciation history of three closely related pines Pinus mugo (T.), P. uliginosa (N.) and P. sylvestris (L.). Molecular Ecology, 20, 1729-1743.
-
(2011)
Molecular Ecology
, vol.20
, pp. 1729-1743
-
-
Wachowiak, W.1
Palmé, A.E.2
Savolainen, O.3
-
84
-
-
0034948197
-
Phylogenetic relationships inferred from ribosomal ITS sequences and biogeographic patterns in representatives of the genus Calopteryx (Insecta: Odonata) of the West Mediterranean and adjacent West European zone
-
DOI 10.1006/mpev.2001.0947
-
Weekers PHH, De Jonckheere JF, Dumont HJ, (2001) Phylogenetic relationships inferred from ribosomal ITS sequences and biogeographic patterns in representatives of the genus Calopteryx (Insecta: Odonata) of the west Mediterranean and adjacent west European zone. Molecular Phylogenetics and Evolution, 20, 89-99. (Pubitemid 32656904)
-
(2001)
Molecular Phylogenetics and Evolution
, vol.20
, Issue.1
, pp. 89-99
-
-
Weekers, P.H.H.1
De Jonckheere, J.F.2
Dumont, H.J.3
-
86
-
-
34547863856
-
Recombination-filtered genomic datasets by information maximization
-
DOI 10.1093/bioinformatics/btm253
-
Woerner AE, Cox MP, Hammer MF, (2007) Recombination-filtered genomic datasets by information maximization. Bioinformatics, 23, 1851-1853. (Pubitemid 47250325)
-
(2007)
Bioinformatics
, vol.23
, Issue.14
, pp. 1851-1853
-
-
Woerner, A.E.1
Cox, M.P.2
Hammer, M.F.3
-
87
-
-
12344265079
-
Divergence population genetics of chimpanzees
-
DOI 10.1093/molbev/msi017
-
Won YJ, Hey J, (2005) Divergence population genetics of chimpanzees. Molecular Biology and Evolution, 22, 297-307. (Pubitemid 40130197)
-
(2005)
Molecular Biology and Evolution
, vol.22
, Issue.2
, pp. 297-307
-
-
Won, Y.-J.1
Hey, J.2
-
88
-
-
0035677674
-
The genic view of the process of speciation
-
Wu CI, (2001) The genic view of the process of speciation. Journal of Evolutionary Biology, 14, 851-865.
-
(2001)
Journal of Evolutionary Biology
, vol.14
, pp. 851-865
-
-
Wu, C.I.1
-
89
-
-
78650482579
-
Testing founder effect speciation: Divergence population genetics of the spoonbills Platalea regia and P. minor (Threskiornithidae, Aves)
-
Yeung CKL, Tsai PW, Chesser RT, et al. (2011) Testing founder effect speciation: divergence population genetics of the spoonbills Platalea regia and P. minor (Threskiornithidae, Aves). Molecular Biology and Evolution, 28, 473-482.
-
(2011)
Molecular Biology and Evolution
, vol.28
, pp. 473-482
-
-
Yeung, C.K.L.1
Tsai, P.W.2
Chesser, R.T.3
|