-
1
-
-
77958028354
-
Regulatory RNA in bacterial pathogens
-
Papenfort K, Vogel J (2010) Regulatory RNA in bacterial pathogens. Cell Host Microbe 8:116-127
-
(2010)
Cell. Host. Microbe.
, vol.8
, pp. 116-127
-
-
Papenfort, K.1
Vogel, J.2
-
2
-
-
60149089144
-
Regulatory RNAs in bacteria
-
Waters LS, Storz G (2009) Regulatory RNAs in bacteria. Cell 136:615-628
-
(2009)
Cell
, vol.136
, pp. 615-628
-
-
Waters, L.S.1
Storz, G.2
-
3
-
-
84859987069
-
-
Hess WR, Marchfelder A (eds Springer, New York
-
Corcoran CP, Papenfort K, Vogel J (2011) In: Hess WR, Marchfelder A (eds) Regulatory RNAs in prokaryotes. Springer, New York, pp 15-50
-
(2011)
Regulatory RNAs in Prokaryotes
, pp. 15-50
-
-
Corcoran, C.P.1
Papenfort, K.2
Vogel, J.3
-
5
-
-
50849105413
-
Deep sequencing analysis of small noncoding RNA and mRNA targets of the global post-transcriptional regulator
-
Sittka A, Lucchini S, Papenfort K, Sharma CM, Rolle K, Binnewies TT, Hinton JC, Vogel J (2008) Deep sequencing analysis of small noncoding RNA and mRNA targets of the global post-transcriptional regulator. PLoS Genet 4:e1000163
-
(2008)
PLoS Genet
, vol.4
-
-
Sittka, A.1
Lucchini, S.2
Papenfort, K.3
Sharma, C.M.4
Rolle, K.5
Binnewies, T.T.6
Hinton, J.C.7
Vogel, J.8
-
6
-
-
0141644746
-
Global analysis of small RNA and mRNA targets of Hfq
-
Zhang A, Wassarman KM, Rosenow C, Tjaden BC, Storz G, Gottesman S (2003) Global analysis of small RNA and mRNA targets of Hfq. Mol Microbiol 50:1111-1124
-
(2003)
Mol. Microbiol.
, vol.50
, pp. 1111-1124
-
-
Zhang, A.1
Wassarman, K.M.2
Rosenow, C.3
Tjaden, B.C.4
Storz, G.5
Gottesman, S.6
-
7
-
-
70349736084
-
Experimental approaches for the discovery and characterization of regulatory small RNA
-
Sharma CM, Vogel J (2009) Experimental approaches for the discovery and characterization of regulatory small RNA. Curr Opin Microbiol 12:536-546
-
(2009)
Curr. Opin. Microbiol.
, vol.12
, pp. 536-546
-
-
Sharma, C.M.1
Vogel, J.2
-
8
-
-
75249100904
-
The role of Hfq in bacterial pathogens
-
Chao Y, Vogel J (2010) The role of Hfq in bacterial pathogens. Curr Opin Microbiol 13:24-33
-
(2010)
Curr Opin Microbiol
, vol.13
, pp. 24-33
-
-
Chao, Y.1
Vogel, J.2
-
9
-
-
34247169597
-
CsrB sRNA family: Sequestration of RNA-binding regulatory proteins
-
Babitzke P, Romeo T (2007) CsrB sRNA family: Sequestration of RNA-binding regulatory proteins. Curr Opin Microbiol 10:156-163
-
(2007)
Curr Opin Microbiol
, vol.10
, pp. 156-163
-
-
Babitzke, P.1
Romeo, T.2
-
10
-
-
34247163202
-
6S RNA: A small RNA regulator of transcription
-
Wassarman KM (2007) 6S RNA: A small RNA regulator of transcription. Curr Opin Microbiol 10:164-168
-
(2007)
Curr. Opin Microbiol.
, vol.10
, pp. 164-168
-
-
Wassarman, K.M.1
-
11
-
-
0033565285
-
HnRNP A/B proteins are required for inhibition of HIV-1 pre-mRNA splicing
-
Caputi M, Mayeda A, Krainer AR, Zahler AM (1999) hnRNP A/B proteins are required for inhibition of HIV-1 pre-mRNA splicing. EMBO J 18:4060-4067
-
(1999)
EMBO J.
, vol.18
, pp. 4060-4067
-
-
Caputi, M.1
Mayeda, A.2
Krainer, A.R.3
Zahler, A.M.4
-
12
-
-
0032125598
-
One-step af fi nity puri fi cation protocol for human telomerase
-
Schnapp G, Rodi HP, Rettig WJ, Schnapp A, Damm K (1998) One-step af fi nity puri fi cation protocol for human telomerase. Nucleic Acids Res 26:3311-3313
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 3311-3313
-
-
Schnapp, G.1
Rodi, H.P.2
Rettig, W.J.3
Schnapp, A.4
Damm, K.5
-
13
-
-
84934444103
-
An af fi nity oligonucleotide displacement strategy to purify ribonucleoprotein complexes applied to human telomerase
-
Kurth I, Cristofari G, Lingner J (2008) An af fi nity oligonucleotide displacement strategy to purify ribonucleoprotein complexes applied to human telomerase. Methods Mol Biol 488:9-22
-
(2008)
Methods Mol. Biol.
, vol.488
, pp. 9-22
-
-
Kurth, I.1
Cristofari, G.2
Lingner, J.3
-
14
-
-
0034625237
-
6S RNA regulates E. coli RNA polymerase activity
-
Wassarman KM, Storz G (2000) 6S RNA regulates E. coli RNA polymerase activity. Cell 101:613-623
-
(2000)
Cell
, vol.101
, pp. 613-623
-
-
Wassarman, K.M.1
Storz, G.2
-
16
-
-
76149125466
-
In vivo expression and puri fi cation of aptamer-tagged small RNA regulators
-
Said N, Rieder R, Hurwitz R, Deckert J, Urlaub H, Vogel J (2009) In vivo expression and puri fi cation of aptamer-tagged small RNA regulators. Nucleic Acids Res 37:e133
-
(2009)
Nucleic. Acids Res.
, vol.37
-
-
Said, N.1
Rieder, R.2
Hurwitz, R.3
Deckert, J.4
Urlaub, H.5
Vogel, J.6
-
18
-
-
36148969305
-
A small non-coding RNA of the invasion gene island (SPI-1) represses outer membrane protein synthesis from the Salmonella core genome
-
Pfeiffer V, Sittka A, Tomer R, Tedin K, Brinkmann V, Vogel J (2007) A small non-coding RNA of the invasion gene island (SPI-1) represses outer membrane protein synthesis from the Salmonella core genome. Mol Microbiol 66:1174-1191
-
(2007)
Mol. Microbiol.
, vol.66
, pp. 1174-1191
-
-
Pfeiffer, V.1
Sittka, A.2
Tomer, R.3
Tedin, K.4
Brinkmann, V.5
Vogel, J.6
-
19
-
-
33847386673
-
Translational control and target recognition by Escherichia coli small RNAs in vivo
-
Urban JH, Vogel J (2007) Translational control and target recognition by Escherichia coli small RNAs in vivo. Nucleic Acids Res 35:1018-1037
-
(2007)
Nucleic Acids Res.
, vol.35
, pp. 1018-1037
-
-
Urban, J.H.1
Vogel, J.2
-
20
-
-
65649152564
-
A green fl uorescent protein (GFP)-based plasmid system to study post-transcriptional control of gene expression in vivo
-
Urban JH, Vogel J (2009) A green fl uorescent protein (GFP)-based plasmid system to study post-transcriptional control of gene expression in vivo. Methods Mol Biol 540:301-319
-
(2009)
Methods Mol. Biol.
, vol.540
, pp. 301-319
-
-
Urban, J.H.1
Vogel, J.2
-
22
-
-
67349278437
-
Deep sequencing of Salmonella RNA associated with heterologous Hfq proteins in vivo reveals small RNAs as a major target class and identi fi es RNA processing phenotypes
-
Sittka A, Sharma CM, Rolle K, Vogel J (2009) Deep sequencing of Salmonella RNA associated with heterologous Hfq proteins in vivo reveals small RNAs as a major target class and identi fi es RNA processing phenotypes. RNA Biol 6:266-275
-
(2009)
RNA Biol.
, vol.6
, pp. 266-275
-
-
Sittka, A.1
Sharma, C.M.2
Rolle, K.3
Vogel, J.4
-
23
-
-
34248582935
-
Western blotting
-
Lee C (2007) Western blotting. Methods Mol Biol 362:391-399
-
(2007)
Methods Mol. Biol.
, vol.362
, pp. 391-399
-
-
Lee, C.1
-
24
-
-
84855510415
-
Detecting sRNAs by Northern blotting
-
Lopez-Gomollon S (2011) Detecting sRNAs by Northern blotting. Methods Mol Biol 732:25-38
-
(2011)
Methods Mol. Biol.
, vol.732
, pp. 25-38
-
-
Lopez-Gomollon, S.1
-
25
-
-
0028268090
-
Kinetic and thermodynamic analysis of RNA-protein interactions in the RNase P holoenzyme from Escherichia coli
-
Talbot SJ, Altman S (1994) Kinetic and thermodynamic analysis of RNA-protein interactions in the RNase P holoenzyme from Escherichia coli . Biochemistry 33:1406-1411
-
(1994)
Biochemistry
, vol.33
, pp. 1406-1411
-
-
Talbot, S.J.1
Altman, S.2
-
26
-
-
0029933128
-
A highly salt-dependent enthalpy change for Escherichia coli SSB protein-nucleic acid binding due to ion-protein interactions
-
Lohman TM, Overman LB, Ferrari ME, Kozlov AG (1996) A highly salt-dependent enthalpy change for Escherichia coli SSB protein-nucleic acid binding due to ion-protein interactions. Biochemistry 35:5272-5279
-
(1996)
Biochemistry
, vol.35
, pp. 5272-5279
-
-
Lohman, T.M.1
Overman, L.B.2
Ferrari, M.E.3
Kozlov, A.G.4
-
27
-
-
17544365656
-
Kinetic and thermodynamic analysis of the interaction between TRAP (trp RNA-binding attenuation protein) of Bacillus subtilis and trp leader RNA
-
Baumann C, Otridge J, Gollnick P (1996) Kinetic and thermodynamic analysis of the interaction between TRAP (trp RNA-binding attenuation protein) of Bacillus subtilis and trp leader RNA. J Biol Chem 271:12269-12274
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 12269-12274
-
-
Baumann, C.1
Otridge, J.2
Gollnick, P.3
-
28
-
-
0036242097
-
Puri fi cation and characterization of native spliceosomes suitable for three-dimensional structural analysis
-
Jurica MS, Licklider LJ, Gygi SR, Grigorieff N, Moore MJ (2002) Puri fi cation and characterization of native spliceosomes suitable for three-dimensional structural analysis. RNA 8:426-439
-
(2002)
RNA
, vol.8
, pp. 426-439
-
-
Jurica, M.S.1
Licklider, L.J.2
Gygi, S.R.3
Grigorieff, N.4
Moore, M.J.5
-
29
-
-
34247158257
-
Mechanism of RNA silencing by Hfq-binding small RNAs
-
Aiba H (2007) Mechanism of RNA silencing by Hfq-binding small RNAs. Curr Opin Microbiol 10:134-139
-
(2007)
Curr. Opin Microbiol.
, vol.10
, pp. 134-139
-
-
Aiba, H.1
-
30
-
-
0034612342
-
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
-
Datsenko KA, Wanner BL (2000) One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc Natl Acad Sci U S A 97:6640-6645
-
(2000)
Proc. Natl. Acad. Sci. U S A
, vol.97
, pp. 6640-6645
-
-
Datsenko, K.A.1
Wanner, B.L.2
-
31
-
-
79952752445
-
Insertion and deletion mutagenesis by overlap extension PCR
-
Lee J, Shin MK, Ryu DK, Kim S, Ryu WS (2010) Insertion and deletion mutagenesis by overlap extension PCR. Methods Mol Biol 634:137-146
-
(2010)
Methods Mol. Biol.
, vol.634
, pp. 137-146
-
-
Lee, J.1
Shin, M.K.2
Ryu, D.K.3
Kim, S.4
Ryu, W.S.5
|