Model membrane platforms for biomedicine: Case study on antiviral drug development

Biointerphases

Volumn 7, Issue 1-4, 2012, Pages 1-20

  Jackman, Joshua A ^a,b   Cho, Nam Joon ^a,c,d  

^a NANYANG TECHNOLOGICAL UNIVERSITY   (Singapore)

^b NANYANG TECHNOLOGICAL UNIVERSITY   (Singapore)

^c NANYANG TECHNOLOGICAL UNIVERSITY   (Singapore)

^d STANFORD UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ANTIVIRAL AGENTS; BIOCHEMISTRY; BIOLOGICAL MEMBRANES; BIOMIMETICS; CYTOLOGY; DISEASES; DRUG PRODUCTS; MEDICAL APPLICATIONS; OUTSOURCING; PEPTIDES; SCAFFOLDS (BIOLOGY); SURFACE CHEMISTRY; VIRUSES;

ANTIVIRAL ACTIVITIES; BIOMEDICAL APPLICATIONS; CLINICAL APPLICATION; COMPLEX BIOLOGICAL SYSTEMS; FUNCTIONAL ACTIVITIES; INTERACTION PARAMETERS; TARGET IDENTIFICATION; THERAPEUTIC INTERVENTION;

BIOLOGICAL SYSTEMS;

DENGUE VIRUS; HEPATITIS C VIRUS; HUMAN IMMUNODEFICIENCY VIRUS; SIMPLEXVIRUS;

ANTIVIRUS AGENT; NS 5 PROTEIN, HEPATITIS C VIRUS; NS-5 PROTEIN, HEPATITIS C VIRUS; VIRUS PROTEIN;

DENGUE VIRUS; DRUG EFFECT; HEPATITIS C VIRUS; HUMAN; HUMAN IMMUNODEFICIENCY VIRUS; MEMBRANE; METABOLISM; REVIEW; SIMPLEXVIRUS; VIRUS REPLICATION;

ANTIVIRAL AGENTS; DENGUE VIRUS; HEPACIVIRUS; HIV; HUMANS; MEMBRANES; SIMPLEXVIRUS; VIRAL NONSTRUCTURAL PROTEINS; VIRUS REPLICATION;

EID: 84864089362     PISSN: 19348630     EISSN: 15594106     Source Type: Journal    
DOI: 10.1007/s13758-011-0018-2     Document Type: Review

References (121)

1. Popot JL, Engelman DM (2000) Annu Rev Biochem 69: 881-922
2. Simons K, Toomre D (2000) Natl Rev Mol Cell Biol 1(1):31-39
3. Singer SJ, Nicolson GL (1972) Science 175(23):720-731
4. Israelachvili JN, Marcelja S, Horn RG (1980) Q Rev Biophys 13(2):121-200
5. Geiger B, Bershadsky A, Pankov R, Yamada KM (2001) Natl Rev Mol Cell Biol 2(11):793-805
6. Smith A-S (2010) Nat Phys 6(10):726-729
7. Hediger MA, Romero MF, Peng JB, Rolfs A, Takanaga H, Bruford EA (2004) Pflugers Arch 447(5):465-468
8. Yildirim MA, Goh KI, Cusick ME, Barabasi AL, Vidal M (2007) Nat Biotechnol 25(10):1119-1126
9. Haywood AM (1994) J Virol 68(1):1-5
10. Miller S, Krijnse-Locker J (2008) Nat Rev Microbiol 6(5): 363-374
11. Salaita K, Nair PM, Petit RS, Neve RM, Das D, Gray JW, Groves JT (2010) Science 327(5971):1380-1385
12. Eckert DM, Kim PS (2001) Annu Rev Biochem 70:777-810
13. Jackman JA, Cho N-J, Duran RS, Frank CW (2009) Langmuir 26(6):4103-4112
14. Garcia ML (2004) Nature 430(6996):153-155
15. Mouritsen OG, Jörgensen K (1998) Pharm Res 15(10): 1507-1519
16. Turk B (2006) Nat Rev Drug Discov 5(9):785-799
17. Arkin MR, Wells JA (2004) Nat Rev Drug Discov 3(4):301-317
18. Tamm LK, Lai AL, Li Y (2007) Biochim Biophys Acta 1768 (12):3052-3060
19. Wang G (2008) Curr Protein Pept Sci 9(1):50-69
20. Mariappan M, Mateja A, Dobosz M, Bove E, Hegde RS, Keenan RJ (2011) Nature 477(7362):61-66
21. Tanford C, Reynolds JA (1976) Biochim Biophys Acta 457(2): 133-170
22. Ferrari E, Wright-Minogue J, Fang JW, Baroudy BM, Lau JY, Hong Z (1999) J Virol 73(2):1649-1654
23. Yamashita T, Kaneko S, Shirota Y, Qin W, Nomura T, Kobayashi K, Murakami S (1998) J Biol Chem 273(25):15479-15486
24. Hook F, Kasemo B, Grunze M, Zauscher S (2008) ACS Nano 2(12):2428-2436
25. Grate JW, Frye GC (1996) Sens Update 2(1):37-83
26. Cooper MA (2002) Nat Rev Drug Discov 1(7):515-528
27. Moskovits M (1985) Rev Mod Phys 57(3):783
28. Wang J (2005) Analyst 130(4):421-426
29. Mrksich M (2008) ACS Nano 2(1):7-18
30. Dufrene YF (2008) Nat Rev Micro 6(9):674-680
31. Whitesides GM, Grzybowski B (2002) Science 295(5564): 2418-2421
32. Castner DG, Ratner BD (2002) Surf Sci 500(1-3):28-60
33. Kasemo B (2002) Surf Sci 500(1-3):656-677
34. Sackmann E (1996) Science 271(5245):43-48
35. Chan Y-HM, Boxer SG (2007) Curr Opin Chem Biol 11(6): 581-587
36. Kiessling V, Domanska MK, Murray D, Wan C, Tamm LK (2008) In: Wiley encyclopedia of chemical biology, vol 4. Wiley, Hoboken, pp 411-422
37. Nair PM, Salaita K, Petit RS, Groves JT (2011) Nat Protoc 6(4):523-539
38. Bayley H, Cremer PS (2001) Nature 413(6852):226-230
39. Castellana ET, Cremer PS (2006) Surf Sci Rep 61:429-444
40. Cho NJ, Cho SJ, Cheong KH, Glenn JS, Frank CW (2007) J Am Chem Soc 129(33):10050-10051
41. Cho NJ, Dvory-Sobol H, Xiong A, Cho SJ, Frank CW, Glenn JS (2009) ACS Chem Biol 4(12):1061-1067
42. Cho NJ, Kanazawa KK, Glenn JS, Frank CW (2007) Anal Chem 79(18):7027-7035
43. Cho NJ, Wang G, Edvardsson M, Glenn JS, Hook F, Frank CW (2009) Anal Chem 81(12):4752-4761
44. Bobardt MD, Cheng G, de Witte L, Selvarajah S, Chatterji U, Sanders-Beer BE, Geijtenbeek TB, Chisari FV, Gallay PA (2008) Proc Natl Acad Sci USA 105(14):5525-5530
45. Cheng G, Montero A, Gastaminza P, Whitten-Bauer C, Wieland SF, Isogawa M, Fredericksen B, Selvarajah S, Gallay PA, Ghadiri MR, Chisari FV (2008) Proc Natl Acad Sci USA 105(8): 3088-3093
46. de Witte L, Bobardt MD, Chatterji U, van Loenen FB, Verjans GM, Geijtenbeek TB, Gallay PA (2011) PLoS One 6(5):e18917
47. Morens DM, Folkers GK, Fauci AS (2004) Nature 430(6996): 242-249
48. De Clercq E (2002) Nat Rev Drug Discov 1(1):13-25
49. De Clercq E (2007) Nat Rev Drug Discov 6(12):1001-1018
50. Penin F, Dubuisson J, Rey FA, Moradpour D, Pawlotsky JM (2004) Hepatology 39(1):5-19
51. Murray CL, Jones CT, Rice CM (2008) Nat Rev Microbiol 6(9):699-708
52. Lindenbach BD, Rice CM (2005) Nature 436(7053):933-938
53. Moradpour D, Penin F, Rice CM (2007) Nat Rev Microbiol 5(6):453-463
54. Froshauer S, Kartenbeck J, Helenius A (1988) J Cell Biol 107(6 Pt 1):2075-2086
55. Egger D, Wolk B, Gosert R, Bianchi L, Blum HE, Moradpour D, Bienz K (2002) J Virol 76(12):5974-5984
56. Suhy DA, Giddings TH Jr, Kirkegaard K (2000) J Virol 74(19): 8953-8965
57. Gosert R, Egger D, Lohmann V, Bartenschlager R, Blum HE, Bienz K, Moradpour D (2003) J Virol 77(9):5487-5492
58. Gelman MA, Glenn JS (2010) Trends Mol Med 17(1):34-46
59. Rong L, Dahari H, Ribeiro RM, Perelson AS (2010) Sci Transl Med 2(30):30ra32
60. Enomoto N, Sakuma I, Asahina Y, Kurosaki M, Murakami T, Yamamoto C, Izumi N, Marumo F, Sato C (1995) J Clin Invest 96(1):224-230
61. Macdonald A, Harris M (2004) J Gen Virol 85(Pt 9):2485-2502
62. Sklan EH, Staschke K, Oakes TM, Elazar M, Winters M, Aroeti B, Danieli T, Glenn JS (2007) J Virol 81(20):11096-11105
63. Elazar M, Cheong KH, Liu P, Greenberg HB, Rice CM, Glenn JS (2003) J Virol 77(10):6055-6061
64. Brass V, Bieck E, Montserret R, Wolk B, Hellings JA, Blum HE, Penin F, Moradpour D (2002) J Biol Chem 277(10): 8130-8139
65. Schmitz U, Tan SL (2008) Recent Pat Antiinfect Drug Discov 3(2):77-92
66. Tellinghuisen TL, Marcotrigiano J, Rice CM (2005) Nature 435(7040):374-379
67. Penin F, Brass V, Appel N, Ramboarina S, Montserret R, Ficheux D, Blum HE, Bartenschlager R, Moradpour D (2004) J Biol Chem 279(39):40835-40843
68. Tanaka M, Sackmann E (2005) Nature 437(7059):656-663
69. Tamm LK, McConnell HM (1985) Biophys J 47(1):105-113
70. Keller CA, Kasemo B (1998) Biophys J 75(3):1397-1402
71. Zwang TJ, Fletcher WR, Lane TJ, Johal MS (2010) Langmuir 26(7):4598-4601
72. Jung LS, Shumaker-Parry JS, Campbell CT, Yee SS, Gelb MH (2000) J Am Chem Soc 122(17):4177-4184
73. Anderson TH, Min Y, Weirich KL, Zeng H, Fygenson D, Israelachvili JN (2009) Langmuir 25(12):6997-7005
74. Peter BJ, Kent HM, Mills IG, Vallis Y, Butler PJ, Evans PR, McMahon HT (2004) Science 303(5657):495-499
75. Reimhult E, Hook F, Kasemo B (2002) J Chem Phys 117: 7401-7404
76. Reimhult E, Hook F, Kasemo B (2002) Langmuir 19(5): 1681-1691
77. Mie Y, Suzuki M, Komatsu Y (2009) J Am Chem Soc 131(19): 6646-6647
78. Jadhav SR, Sui D, Garavito RM, Worden RM (2008) J Colloid Interface Sci 322(2):465-472
79. Weiss SA, Bushby RJ, Evans SD, Henderson PJ, Jeuken LJ (2009) Biochem J 417(2):555-560
80. Cho NJ, Cheong KH, Lee C, Frank CW, Glenn JS (2007) J Virol 81(12):6682-6689
81. Rodahl M, Hook F, Fredriksson C, Keller CA, Krozer A, Brzezinski P, Voinova M, Kasemo B (1997) Faraday Discuss 107:229-246
82. Cho NJ, Frank CW, Kasemo B, Hook F (2010) Nat Protoc 5(6):1096-1106
83. Dixon MC (2008) J Biomol Tech 19(3):151-158
84. Mechler A, Praporski S, Atmuri K, Boland M, Separovic F, Martin LL (2007) Biophys J 93(11):3907-3916
85. Glasmastar K, Larsson C, Hook F, Kasemo B (2002) J Colloid Interface Sci 246(1):40-47
86. Richter R, Mukhopadhyay A, Brisson A (2003) Biophys J 85(5):3035-3047
87. Tyagi M, Rusnati M, Presta M, Giacca M (2001) J Biol Chem 276(5):3254-3261
88. Mingeot-Leclercq MP, Deleu M, Brasseur R, Dufrene YF (2008) Nat Protoc 3(10):1654-1659
89. Matsuzaki K, Murase O, Miyajima K (1995) Biochemistry 34(39):12553-12559
90. Benachir T, Monette M, Grenier J, Lafleur M (1997) Eur Biophys J 25(3):201-210
91. Hook F, Kasemo B, Nylander T, Fant C, Sott K, Elwing H (2001) Anal Chem 73(24):5796-5804
92. Voinova MV et al (1999) Physica Scripta 59(5):391
93. Hatzakis NS, Bhatia VK, Larsen J, Madsen KL, Bolinger PY, Kunding AH, Castillo J, Gether U, Hedegard P, Stamou D (2009) Nat Chem Biol 5(11):835-841
94. Wang G, Rodahl M, Edvardsson M, Svedhem S, Ohlsson G, Hook F, Kasemo B (2008) Rev Sci Instrum 79(7):075107
95. Edvardsson M, Svedhem S, Wang G, Richter R, Rodahl M, Kasemo B (2008) Anal Chem 81(1):349-361
96. Aloia RC, Tian H, Jensen FC (1993) Proc Natl Acad Sci USA 90(11):5181-5185
97. Baker KA, Dutch RE, Lamb RA, Jardetzky TS (1999) Mol Cell 3(3):309-319
98. Calisher CH, Gould EA (2003) Adv Virus Res 59:1-19
99. Harris A, Cardone G, Winkler DC, Heymann JB, Brecher M, White JM, Steven AC (2006) Proc Natl Acad Sci USA 103(50):19123-19127
100. Kohno T, Goto T, Takasaki T, Morita C, Nakaya T, Ikuta K, Kurane I, Sano K, Nakai M (1999) J Virol 73(1):760-766
101. Cho N-J, Jackman JA, Liu M, Frank CW (2011) Langmuir 27(7):3739-3748
102. Joanne P, Nicolas P, El Amri C (2009) Protein Pept Lett 16(7):743-750
103. Shai Y (2000) Biosci Rep 20(6):535-555
104. Jenssen H, Hamill P, Hancock RE (2006) Clin Microbiol Rev 19(3):491-511
105. Jaeckel E, Cornberg M, Wedemeyer H, Santantonio T, Mayer J, Zankel M, Pastore G, Dietrich M, Trautwein C, Manns MP (2001) N Engl J Med 345(20):1452-1457
106. Li GR, He LY, Liu XY, Liu AP, Huang YB, Qiu C, Zhang XY, Xu JQ, Yang W, Chen YX (2011) Chem Biol Drug Des 78(5): 835-843
107. Lin Q, Fang D, Hou X, Le Y, Fang J, Wen F, Gong W, Chen K, Wang JM, Su SB (2011) J Immunol 186(4):2087-2094
108. Palomares-Jerez MF, Guillen J, Villalain J (2010) Biochim Biophys Acta 1798(6):1212-1224
109. Wolf MC, Freiberg AN, Zhang T, Akyol-Ataman Z, Grock A, Hong PW, Li J, Watson NF, Fang AQ, Aguilar HC, Porotto M, Honko AN, Damoiseaux R, Miller JP, Woodson SE, Chantasirivisal S, Fontanes V, Negrete OA, Krogstad P, Dasgupta A, Moscona A, Hensley LE, Whelan SP, Faull KF, Holbrook MR, Jung ME, Lee B (2010) Proc Natl Acad Sci USA 107(7): 3157-3162
110. Holthuis JC, Levine TP (2005) Natl Rev Mol Cell Biol 6(3): 209-220
111. McNeil PL, Steinhardt RA (2003) Annu Rev Cell Dev Biol 19:697-731
112. McNeil PL, Terasaki M (2001) Nat Cell Biol 3(5):E124-E129
113. Meldolesi J (2003) J Cell Mol Med 7(3):197-203
114. St Vincent MR, Colpitts CC, Ustinov AV, Muqadas M, Joyce MA, Barsby NL, Epand RF, Epand RM, Khramyshev SA, Valueva OA, Korshun VA, Tyrrell DL, Schang LM (2010) Proc Natl Acad Sci USA 107(40):17339-17344
115. Boriskin YS, Pecheur EI, Polyak SJ (2006) Virol J 3:56
116. Shi L, Xiong H, He J, Deng H, Li Q, Zhong Q, Hou W, Cheng L, Xiao H, Yang Z (2007) Arch Virol 152(8):1447-1455
117. Teissier E, Zandomeneghi G, Loquet A, Lavillette D, Lavergne JP, Montserret R, Cosset FL, Bockmann A, Meier BH, Penin F, Pecheur EI (2011) PLoS One 6(1):e15874
118. Villalain J (2010) J Phys Chem B 114(25):8544-8554
119. Gao M, Nettles RE, Belema M, Snyder LB, Nguyen VN, Fridell RA, Serrano-Wu MH, Langley DR, Sun JH, O'Boyle DR 2nd, Lemm JA, Wang C, Knipe JO, Chien C, Colonno RJ, Grasela DM, Meanwell NA, Hamann LG (2010) Nature 465(7294): 96-100
120. Fridell RA, Qiu D, Valera L, Wang C, Rose RE, Gao M (2011) J Virol 85(14):7312-7320
121. Fridell RA, Qiu D, Wang C, Valera L, Gao M (2010) Antimicrob Agents Chemother 54(9):3641-3650