메뉴 건너뛰기




Volumn 8, Issue 6, 2012, Pages

Phylogenomic analysis reveals dynamic evolutionary history of the Drosophila heterochromatin protein 1 (HP1) gene family

Author keywords

[No Author keywords available]

Indexed keywords

HETEROCHROMATIN PROTEIN 1; DROSOPHILA PROTEIN; HETEROCHROMATIN PROTEIN 1, DROSOPHILA; NONHISTONE PROTEIN;

EID: 84864048356     PISSN: 15537390     EISSN: 15537404     Source Type: Journal    
DOI: 10.1371/journal.pgen.1002729     Document Type: Article
Times cited : (43)

References (67)
  • 1
    • 0038349948 scopus 로고    scopus 로고
    • Sequencing and comparison of yeast species to identify genes and regulatory elements
    • Kellis M, Patterson N, Endrizzi M, Birren B, Lander ES, (2003) Sequencing and comparison of yeast species to identify genes and regulatory elements. Nature 423: 241-254.
    • (2003) Nature , vol.423 , pp. 241-254
    • Kellis, M.1    Patterson, N.2    Endrizzi, M.3    Birren, B.4    Lander, E.S.5
  • 2
    • 47149117454 scopus 로고    scopus 로고
    • Evolution of genes and genomes on the Drosophila phylogeny
    • Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, et al. (2007) Evolution of genes and genomes on the Drosophila phylogeny. Nature 450: 203-218.
    • (2007) Nature , vol.450 , pp. 203-218
    • Clark, A.G.1    Eisen, M.B.2    Smith, D.R.3    Bergman, C.M.4    Oliver, B.5
  • 3
    • 34250813192 scopus 로고    scopus 로고
    • The Release 5.1 annotation of Drosophila melanogaster heterochromatin
    • Smith CD, Shu S, Mungall CJ, Karpen GH, (2007) The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Science 316: 1586-1591.
    • (2007) Science , vol.316 , pp. 1586-1591
    • Smith, C.D.1    Shu, S.2    Mungall, C.J.3    Karpen, G.H.4
  • 4
    • 0016871311 scopus 로고
    • Complexity of germline and somatic DNA in Ascaris
    • Moritz KB, Roth GE, (1976) Complexity of germline and somatic DNA in Ascaris. Nature 259: 55-57.
    • (1976) Nature , vol.259 , pp. 55-57
    • Moritz, K.B.1    Roth, G.E.2
  • 5
    • 69249219052 scopus 로고    scopus 로고
    • A surrogate approach to study the evolution of noncoding DNA elements that organize eukaryotic genomes
    • Vermaak D, Bayes JJ, Malik HS, (2009) A surrogate approach to study the evolution of noncoding DNA elements that organize eukaryotic genomes. J Hered 100: 624-636.
    • (2009) J Hered , vol.100 , pp. 624-636
    • Vermaak, D.1    Bayes, J.J.2    Malik, H.S.3
  • 6
    • 0033811254 scopus 로고    scopus 로고
    • Conservation of heterochromatin protein 1 function
    • Wang G, Ma A, Chow CM, Horsley D, Brown NR, et al. (2000) Conservation of heterochromatin protein 1 function. Mol Cell Biol 20: 6970-6983.
    • (2000) Mol Cell Biol , vol.20 , pp. 6970-6983
    • Wang, G.1    Ma, A.2    Chow, C.M.3    Horsley, D.4    Brown, N.R.5
  • 7
    • 25144468434 scopus 로고    scopus 로고
    • The mechanism of telomere protection: a comparison between Drosophila and humans
    • Cenci G, Ciapponi L, Gatti M, (2005) The mechanism of telomere protection: a comparison between Drosophila and humans. Chromosoma 114: 135-145.
    • (2005) Chromosoma , vol.114 , pp. 135-145
    • Cenci, G.1    Ciapponi, L.2    Gatti, M.3
  • 8
    • 43049174592 scopus 로고    scopus 로고
    • Telomere capping in Drosophila: dealing with chromosome ends that most resemble DNA breaks
    • Rong YS, (2008) Telomere capping in Drosophila: dealing with chromosome ends that most resemble DNA breaks. Chromosoma 117: 235-242.
    • (2008) Chromosoma , vol.117 , pp. 235-242
    • Rong, Y.S.1
  • 9
    • 69249225196 scopus 로고    scopus 로고
    • The Drosophila HP1 homolog Rhino is required for transposon silencing and piRNA production by dual-strand clusters
    • Klattenhoff C, Xi H, Li C, Lee S, Xu J, et al. (2009) The Drosophila HP1 homolog Rhino is required for transposon silencing and piRNA production by dual-strand clusters. Cell 138: 1137-1149.
    • (2009) Cell , vol.138 , pp. 1137-1149
    • Klattenhoff, C.1    Xi, H.2    Li, C.3    Lee, S.4    Xu, J.5
  • 10
    • 70450223175 scopus 로고    scopus 로고
    • Altered heterochromatin binding by a hybrid sterility protein in Drosophila sibling species
    • Bayes JJ, Malik HS, (2009) Altered heterochromatin binding by a hybrid sterility protein in Drosophila sibling species. Science 326: 1538-1541.
    • (2009) Science , vol.326 , pp. 1538-1541
    • Bayes, J.J.1    Malik, H.S.2
  • 11
    • 33751577950 scopus 로고    scopus 로고
    • Two Dobzhansky-Muller genes interact to cause hybrid lethality in Drosophila
    • Brideau NJ, Flores HA, Wang J, Maheshwari S, Wang X, et al. (2006) Two Dobzhansky-Muller genes interact to cause hybrid lethality in Drosophila. Science 314: 1292-1295.
    • (2006) Science , vol.314 , pp. 1292-1295
    • Brideau, N.J.1    Flores, H.A.2    Wang, J.3    Maheshwari, S.4    Wang, X.5
  • 12
    • 0028947197 scopus 로고
    • Heterochromatin protein 1 is required for correct chromosome segregation in Drosophila embryos
    • Kellum R, Alberts BM, (1995) Heterochromatin protein 1 is required for correct chromosome segregation in Drosophila embryos. J Cell Sci 108 (Pt 4): 1419-1431.
    • (1995) J Cell Sci , vol.108 , Issue.Pt 4 , pp. 1419-1431
    • Kellum, R.1    Alberts, B.M.2
  • 13
    • 0035678559 scopus 로고    scopus 로고
    • Drosophila rhino encodes a female-specific chromo-domain protein that affects chromosome structure and egg polarity
    • Volpe AM, Horowitz H, Grafer CM, Jackson SM, Berg CA, (2001) Drosophila rhino encodes a female-specific chromo-domain protein that affects chromosome structure and egg polarity. Genetics 159: 1117-1134.
    • (2001) Genetics , vol.159 , pp. 1117-1134
    • Volpe, A.M.1    Horowitz, H.2    Grafer, C.M.3    Jackson, S.M.4    Berg, C.A.5
  • 14
    • 33745441569 scopus 로고    scopus 로고
    • Positive selection drives the evolution of rhino, a member of the heterochromatin protein 1 family in Drosophila
    • doi:10.1371/journal.pgen.0010009
    • Vermaak D, Henikoff S, Malik HS, (2005) Positive selection drives the evolution of rhino, a member of the heterochromatin protein 1 family in Drosophila. PLoS Genet doi:10.1371/journal.pgen.0010009.
    • (2005) PLoS Genet
    • Vermaak, D.1    Henikoff, S.2    Malik, H.S.3
  • 16
    • 0035102746 scopus 로고    scopus 로고
    • The hinge and chromo shadow domain impart distinct targeting of HP1-like proteins
    • Smothers JF, Henikoff S, (2001) The hinge and chromo shadow domain impart distinct targeting of HP1-like proteins. Mol Cell Biol 21: 2555-2569.
    • (2001) Mol Cell Biol , vol.21 , pp. 2555-2569
    • Smothers, J.F.1    Henikoff, S.2
  • 17
    • 0031976258 scopus 로고    scopus 로고
    • Phylogenomics: improving functional predictions for uncharacterized genes by evolutionary analysis
    • Eisen JA, (1998) Phylogenomics: improving functional predictions for uncharacterized genes by evolutionary analysis. Genome Res 8: 163-167.
    • (1998) Genome Res , vol.8 , pp. 163-167
    • Eisen, J.A.1
  • 18
    • 0022818549 scopus 로고
    • Identification of a nonhistone chromosomal protein associated with heterochromatin in Drosophila melanogaster and its gene
    • James TC, Elgin SC, (1986) Identification of a nonhistone chromosomal protein associated with heterochromatin in Drosophila melanogaster and its gene. Mol Cell Biol 6: 3862-3872.
    • (1986) Mol Cell Biol , vol.6 , pp. 3862-3872
    • James, T.C.1    Elgin, S.C.2
  • 19
    • 0024445456 scopus 로고
    • Distribution patterns of HP1, a heterochromatin-associated nonhistone chromosomal protein of Drosophila
    • James TC, Eissenberg JC, Craig C, Dietrich V, Hobson A, et al. (1989) Distribution patterns of HP1, a heterochromatin-associated nonhistone chromosomal protein of Drosophila. Eur J Cell Biol 50: 170-180.
    • (1989) Eur J Cell Biol , vol.50 , pp. 170-180
    • James, T.C.1    Eissenberg, J.C.2    Craig, C.3    Dietrich, V.4    Hobson, A.5
  • 20
    • 0026098009 scopus 로고
    • The Polycomb protein shares a homologous domain with a heterochromatin-associated protein of Drosophila
    • Paro R, Hogness DS, (1991) The Polycomb protein shares a homologous domain with a heterochromatin-associated protein of Drosophila. Proc Natl Acad Sci U S A 88: 263-267.
    • (1991) Proc Natl Acad Sci U S A , vol.88 , pp. 263-267
    • Paro, R.1    Hogness, D.S.2
  • 21
    • 0028812044 scopus 로고
    • The chromo shadow domain, a second chromo domain in heterochromatin-binding protein 1, HP1
    • Aasland R, Stewart AF, (1995) The chromo shadow domain, a second chromo domain in heterochromatin-binding protein 1, HP1. Nucleic Acids Res 23: 3168-3173.
    • (1995) Nucleic Acids Res , vol.23 , pp. 3168-3173
    • Aasland, R.1    Stewart, A.F.2
  • 22
    • 0035282458 scopus 로고    scopus 로고
    • Selective recognition of methylated lysine 9 on histone H3 by the HP1 chromo domain
    • Bannister AJ, Zegerman P, Partridge JF, Miska EA, Thomas JO, et al. (2001) Selective recognition of methylated lysine 9 on histone H3 by the HP1 chromo domain. Nature 410: 120-124.
    • (2001) Nature , vol.410 , pp. 120-124
    • Bannister, A.J.1    Zegerman, P.2    Partridge, J.F.3    Miska, E.A.4    Thomas, J.O.5
  • 23
    • 0033965983 scopus 로고    scopus 로고
    • The HP1 chromo shadow domain binds a consensus peptide pentamer
    • Smothers JF, Henikoff S, (2000) The HP1 chromo shadow domain binds a consensus peptide pentamer. Curr Biol 10: 27-30.
    • (2000) Curr Biol , vol.10 , pp. 27-30
    • Smothers, J.F.1    Henikoff, S.2
  • 24
    • 0038613861 scopus 로고    scopus 로고
    • HP1 binding to native chromatin in vitro is determined by the hinge region and not by the chromodomain
    • Meehan RR, Kao CF, Pennings S, (2003) HP1 binding to native chromatin in vitro is determined by the hinge region and not by the chromodomain. EMBO J 22: 3164-3174.
    • (2003) EMBO J , vol.22 , pp. 3164-3174
    • Meehan, R.R.1    Kao, C.F.2    Pennings, S.3
  • 25
    • 0036775704 scopus 로고    scopus 로고
    • Coordinated methyl and RNA binding is required for heterochromatin localization of mammalian HP1alpha
    • Muchardt C, Guilleme M, Seeler JS, Trouche D, Dejean A, et al. (2002) Coordinated methyl and RNA binding is required for heterochromatin localization of mammalian HP1alpha. EMBO Rep 3: 975-981.
    • (2002) EMBO Rep , vol.3 , pp. 975-981
    • Muchardt, C.1    Guilleme, M.2    Seeler, J.S.3    Trouche, D.4    Dejean, A.5
  • 27
    • 73349091841 scopus 로고    scopus 로고
    • Multiple roles for heterochromatin protein 1 genes in Drosophila
    • Vermaak D, Malik HS, (2009) Multiple roles for heterochromatin protein 1 genes in Drosophila. Annu Rev Genet 43: 467-492.
    • (2009) Annu Rev Genet , vol.43 , pp. 467-492
    • Vermaak, D.1    Malik, H.S.2
  • 28
    • 85047700164 scopus 로고    scopus 로고
    • The rapid evolution of reproductive proteins
    • Swanson WJ, Vacquier VD, (2002) The rapid evolution of reproductive proteins. Nat Rev Genet 3: 137-144.
    • (2002) Nat Rev Genet , vol.3 , pp. 137-144
    • Swanson, W.J.1    Vacquier, V.D.2
  • 30
    • 78650385315 scopus 로고    scopus 로고
    • New genes in Drosophila quickly become essential
    • Chen S, Zhang YE, Long M, (2010) New genes in Drosophila quickly become essential. Science 330: 1682-1685.
    • (2010) Science , vol.330 , pp. 1682-1685
    • Chen, S.1    Zhang, Y.E.2    Long, M.3
  • 32
    • 0024116811 scopus 로고
    • "Silent" sites in Drosophila genes are not neutral: evidence of selection among synonymous codons
    • Shields DC, Sharp PM, Higgins DG, Wright F, (1988) "Silent" sites in Drosophila genes are not neutral: evidence of selection among synonymous codons. Mol Biol Evol 5: 704-716.
    • (1988) Mol Biol Evol , vol.5 , pp. 704-716
    • Shields, D.C.1    Sharp, P.M.2    Higgins, D.G.3    Wright, F.4
  • 35
    • 33646897065 scopus 로고    scopus 로고
    • Oxymoron no more: the expanding world of heterochromatic genes
    • Yasuhara JC, Wakimoto BT, (2006) Oxymoron no more: the expanding world of heterochromatic genes. Trends Genet 22: 330-338.
    • (2006) Trends Genet , vol.22 , pp. 330-338
    • Yasuhara, J.C.1    Wakimoto, B.T.2
  • 36
    • 37249016357 scopus 로고    scopus 로고
    • Analysis of Drosophila species genome size and satellite DNA content reveals significant differences among strains as well as between species
    • Bosco G, Campbell P, Leiva-Neto JT, Markow TA, (2007) Analysis of Drosophila species genome size and satellite DNA content reveals significant differences among strains as well as between species. Genetics 177: 1277-1290.
    • (2007) Genetics , vol.177 , pp. 1277-1290
    • Bosco, G.1    Campbell, P.2    Leiva-Neto, J.T.3    Markow, T.A.4
  • 37
    • 52049125422 scopus 로고    scopus 로고
    • Polytene chromosomal maps of 11 Drosophila species: the order of genomic scaffolds inferred from genetic and physical maps
    • Schaeffer SW, Bhutkar A, McAllister BF, Matsuda M, Matzkin LM, et al. (2008) Polytene chromosomal maps of 11 Drosophila species: the order of genomic scaffolds inferred from genetic and physical maps. Genetics 179: 1601-1655.
    • (2008) Genetics , vol.179 , pp. 1601-1655
    • Schaeffer, S.W.1    Bhutkar, A.2    McAllister, B.F.3    Matsuda, M.4    Matzkin, L.M.5
  • 38
    • 77953752966 scopus 로고    scopus 로고
    • Translocation of Y-linked genes to the dot chromosome in Drosophila pseudoobscura
    • Larracuente AM, Noor MA, Clark AG, (2010) Translocation of Y-linked genes to the dot chromosome in Drosophila pseudoobscura. Mol Biol Evol 27: 1612-1620.
    • (2010) Mol Biol Evol , vol.27 , pp. 1612-1620
    • Larracuente, A.M.1    Noor, M.A.2    Clark, A.G.3
  • 40
    • 11844260659 scopus 로고    scopus 로고
    • Y chromosome of D. pseudoobscura is not homologous to the ancestral Drosophila Y
    • Carvalho AB, Clark AG, (2005) Y chromosome of D. pseudoobscura is not homologous to the ancestral Drosophila Y. Science 307: 108-110.
    • (2005) Science , vol.307 , pp. 108-110
    • Carvalho, A.B.1    Clark, A.G.2
  • 41
    • 65549105694 scopus 로고    scopus 로고
    • Specialized piRNA pathways act in germline and somatic tissues of the Drosophila ovary
    • Malone CD, Brennecke J, Dus M, Stark A, McCombie WR, et al. (2009) Specialized piRNA pathways act in germline and somatic tissues of the Drosophila ovary. Cell 137: 522-535.
    • (2009) Cell , vol.137 , pp. 522-535
    • Malone, C.D.1    Brennecke, J.2    Dus, M.3    Stark, A.4    McCombie, W.R.5
  • 43
    • 0035282573 scopus 로고    scopus 로고
    • Methylation of histone H3 lysine 9 creates a binding site for HP1 proteins
    • Lachner M, O'Carroll D, Rea S, Mechtler K, Jenuwein T, (2001) Methylation of histone H3 lysine 9 creates a binding site for HP1 proteins. Nature 410: 116-120.
    • (2001) Nature , vol.410 , pp. 116-120
    • Lachner, M.1    O'Carroll, D.2    Rea, S.3    Mechtler, K.4    Jenuwein, T.5
  • 44
    • 77957776228 scopus 로고    scopus 로고
    • Systematic protein location mapping reveals five principal chromatin types in Drosophila cells
    • Filion GJ, van Bemmel JG, Braunschweig U, Talhout W, Kind J, et al. (2010) Systematic protein location mapping reveals five principal chromatin types in Drosophila cells. Cell 143: 212-224.
    • (2010) Cell , vol.143 , pp. 212-224
    • Filion, G.J.1    van Bemmel, J.G.2    Braunschweig, U.3    Talhout, W.4    Kind, J.5
  • 45
    • 79952198381 scopus 로고    scopus 로고
    • Analyses of nuclearly encoded mitochondrial genes suggest gene duplication as a mechanism for resolving intralocus sexually antagonistic conflict in Drosophila
    • Gallach M, Chandrasekaran C, Betran E, (2010) Analyses of nuclearly encoded mitochondrial genes suggest gene duplication as a mechanism for resolving intralocus sexually antagonistic conflict in Drosophila. Genome Biol Evol 2: 835-850.
    • (2010) Genome Biol Evol , vol.2 , pp. 835-850
    • Gallach, M.1    Chandrasekaran, C.2    Betran, E.3
  • 46
    • 0037076341 scopus 로고    scopus 로고
    • Segregation distortion induced by wild-type RanGAP in Drosophila
    • Kusano A, Staber C, Ganetzky B, (2002) Segregation distortion induced by wild-type RanGAP in Drosophila. Proc Natl Acad Sci U S A 99: 6866-6870.
    • (2002) Proc Natl Acad Sci U S A , vol.99 , pp. 6866-6870
    • Kusano, A.1    Staber, C.2    Ganetzky, B.3
  • 47
    • 84864046245 scopus 로고    scopus 로고
    • Birth, death and replacement of karyopherins in Drosophila
    • Phadnis N, Hsieh E, Malik HS, (2011) Birth, death and replacement of karyopherins in Drosophila. Mol Biol Evol.
    • (2011) Mol Biol Evol
    • Phadnis, N.1    Hsieh, E.2    Malik, H.S.3
  • 48
    • 59349085770 scopus 로고    scopus 로고
    • Small RNA-directed heterochromatin formation in the context of development: what flies might learn from fission yeast
    • Huisinga KL, Elgin SC, (2009) Small RNA-directed heterochromatin formation in the context of development: what flies might learn from fission yeast. Biochim Biophys Acta 1789: 3-16.
    • (2009) Biochim Biophys Acta , vol.1789 , pp. 3-16
    • Huisinga, K.L.1    Elgin, S.C.2
  • 49
    • 0342322701 scopus 로고    scopus 로고
    • Chromosomal position effects reveal different cis-acting requirements for rDNA transcription and sex chromosome pairing in Drosophila melanogaster
    • Briscoe A Jr, Tomkiel JE, (2000) Chromosomal position effects reveal different cis-acting requirements for rDNA transcription and sex chromosome pairing in Drosophila melanogaster. Genetics 155: 1195-1211.
    • (2000) Genetics , vol.155 , pp. 1195-1211
    • Briscoe Jr., A.1    Tomkiel, J.E.2
  • 50
    • 85011941304 scopus 로고    scopus 로고
    • Transgenic tools for members of the genus Drosophila with sequenced genomes
    • Holtzman S, Miller D, Eisman R, Kuwayama H, Niimi T, et al. (2010) Transgenic tools for members of the genus Drosophila with sequenced genomes. Fly (Austin) 4: 349-362.
    • (2010) Fly (Austin) , vol.4 , pp. 349-362
    • Holtzman, S.1    Miller, D.2    Eisman, R.3    Kuwayama, H.4    Niimi, T.5
  • 53
    • 0035812294 scopus 로고    scopus 로고
    • Molecular biology of the chromo domain: an ancient chromatin module comes of age
    • Eissenberg JC, (2001) Molecular biology of the chromo domain: an ancient chromatin module comes of age. Gene 275: 19-29.
    • (2001) Gene , vol.275 , pp. 19-29
    • Eissenberg, J.C.1
  • 54
    • 33846948223 scopus 로고    scopus 로고
    • HP1 controls genomic targeting of four novel heterochromatin proteins in Drosophila
    • Greil F, de Wit E, Bussemaker HJ, van Steensel B, (2007) HP1 controls genomic targeting of four novel heterochromatin proteins in Drosophila. EMBO J 26: 741-751.
    • (2007) EMBO J , vol.26 , pp. 741-751
    • Greil, F.1    de Wit, E.2    Bussemaker, H.J.3    van Steensel, B.4
  • 55
    • 57549088840 scopus 로고    scopus 로고
    • Telomeric position effect-a third silencing mechanism in eukaryotes
    • doi:10.1371/journal.pone.0003864
    • Doheny JG, Mottus R, Grigliatti TA, (2008) Telomeric position effect-a third silencing mechanism in eukaryotes. PLoS ONE 3 doi:10.1371/journal.pone.0003864.
    • (2008) PLoS ONE , vol.3
    • Doheny, J.G.1    Mottus, R.2    Grigliatti, T.A.3
  • 56
    • 62549142220 scopus 로고    scopus 로고
    • Umbrea, a chromo shadow domain protein in Drosophila melanogaster heterochromatin, interacts with Hip, HP1 and HOAP
    • Joppich C, Scholz S, Korge G, Schwendemann A, (2009) Umbrea, a chromo shadow domain protein in Drosophila melanogaster heterochromatin, interacts with Hip, HP1 and HOAP. Chromosome Res 17: 19-36.
    • (2009) Chromosome Res , vol.17 , pp. 19-36
    • Joppich, C.1    Scholz, S.2    Korge, G.3    Schwendemann, A.4
  • 57
    • 38649110663 scopus 로고    scopus 로고
    • BEAST: Bayesian evolutionary analysis by sampling trees
    • Drummond AJ, Rambaut A, (2007) BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol Biol 7: 214.
    • (2007) BMC Evol Biol , vol.7 , pp. 214
    • Drummond, A.J.1    Rambaut, A.2
  • 58
    • 33344465800 scopus 로고    scopus 로고
    • Relaxed phylogenetics and dating with confidence
    • doi:10.1371/journal.pbio.0040088
    • Drummond AJ, Ho SY, Phillips MJ, Rambaut A, (2006) Relaxed phylogenetics and dating with confidence. PLoS Biol 4 doi:10.1371/journal.pbio.0040088.
    • (2006) PLoS Biol , vol.4
    • Drummond, A.J.1    Ho, S.Y.2    Phillips, M.J.3    Rambaut, A.4
  • 59
    • 28944450584 scopus 로고    scopus 로고
    • Choosing appropriate substitution models for the phylogenetic analysis of protein-coding sequences
    • Shapiro B, Rambaut A, Drummond AJ, (2006) Choosing appropriate substitution models for the phylogenetic analysis of protein-coding sequences. Mol Biol Evol 23: 7-9.
    • (2006) Mol Biol Evol , vol.23 , pp. 7-9
    • Shapiro, B.1    Rambaut, A.2    Drummond, A.J.3
  • 60
    • 35948940895 scopus 로고    scopus 로고
    • Population genomics: whole-genome analysis of polymorphism and divergence in Drosophila simulans
    • doi:10.1371/journal.pbio.0050310
    • Begun DJ, Holloway AK, Stevens K, Hillier LW, Poh YP, et al. (2007) Population genomics: whole-genome analysis of polymorphism and divergence in Drosophila simulans. PLoS Biol 5 doi:10.1371/journal.pbio.0050310.
    • (2007) PLoS Biol , vol.5
    • Begun, D.J.1    Holloway, A.K.2    Stevens, K.3    Hillier, L.W.4    Poh, Y.P.5
  • 62
    • 0025318864 scopus 로고
    • The 'effective number of codons' used in a gene
    • Wright F, (1990) The 'effective number of codons' used in a gene. Gene 87: 23-29.
    • (1990) Gene , vol.87 , pp. 23-29
    • Wright, F.1
  • 63
    • 65649117685 scopus 로고    scopus 로고
    • DnaSP v5: a software for comprehensive analysis of DNA polymorphism data
    • Librado P, Rozas J, (2009) DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics 25: 1451-1452.
    • (2009) Bioinformatics , vol.25 , pp. 1451-1452
    • Librado, P.1    Rozas, J.2
  • 64
    • 34547803197 scopus 로고    scopus 로고
    • PAML 4: phylogenetic analysis by maximum likelihood
    • Yang Z, (2007) PAML 4: phylogenetic analysis by maximum likelihood. Mol Biol Evol 24: 1586-1591.
    • (2007) Mol Biol Evol , vol.24 , pp. 1586-1591
    • Yang, Z.1
  • 65
    • 0026428610 scopus 로고
    • Adaptive protein evolution at the Adh locus in Drosophila
    • McDonald JH, Kreitman M, (1991) Adaptive protein evolution at the Adh locus in Drosophila. Nature 351: 652-654.
    • (1991) Nature , vol.351 , pp. 652-654
    • McDonald, J.H.1    Kreitman, M.2
  • 67
    • 33646191543 scopus 로고    scopus 로고
    • Repeated morphological evolution through cis-regulatory changes in a pleiotropic gene
    • Prud'homme B, Gompel N, Rokas A, Kassner VA, Williams TM, et al. (2006) Repeated morphological evolution through cis-regulatory changes in a pleiotropic gene. Nature 440: 1050-1053.
    • (2006) Nature , vol.440 , pp. 1050-1053
    • Prud'homme, B.1    Gompel, N.2    Rokas, A.3    Kassner, V.A.4    Williams, T.M.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.