MicroRNA profiling in duodenal ulcer disease caused by Helicobacter pylori infection in a Western population

Clinical Microbiology and Infection

Volumn 18, Issue 8, 2012, Pages

  Lario, S ^a,b   Ramirez Lazaro M J ^a,b   Aransay, A M ^c   Lozano, J J ^b   Montserrat, A ^a,b   Casalots, A ^d   Junquera, F ^a,b   Alvarez J ^c   Segura, F ^d   Campo, R ^a,b   Calvet, X ^a,b  

^a PARC TAULÍ HOSPITAL UNIVERSITARI   (Spain)

^b INSTITUTO DE SALUD CARLOS III   (Spain)

^c CIC BIOGUNE   (Spain)

^d HOSPITAL DE SABADELL   (Spain)

Author keywords

Chronic active gastritis; Duodenal ulcer disease; Helicobacter pylori; MicroRNA

Indexed keywords

CAGA PROTEIN; INTERLEUKIN 12P35; INTERLEUKIN 12P40; INTERLEUKIN 23P19; INTERLEUKIN 8; MESSENGER RNA; MICRORNA; MICRORNA 137; MICRORNA 146A; MICRORNA 146B; MICRORNA 155; MICRORNA 190; MICRORNA 204; MICRORNA 519A; MICRORNA 566; MICRORNA 5P; MICRORNA 650; MICRORNA 766; MICRORNA 9; MICRORNA 96; MYELOID DIFFERENTIATION FACTOR 88; STAT6 PROTEIN; SUPPRESSOR OF CYTOKINE SIGNALING 2; TRANSCRIPTION FACTOR GATA 6; UNCLASSIFIED DRUG; VACUOLATING TOXIN;

ADULT; ANTIGEN EXPRESSION; ARTICLE; CLINICAL ARTICLE; CONTROLLED STUDY; DIAGNOSTIC ACCURACY; DOWN REGULATION; DUODENUM ULCER; DYSPEPSIA; FEMALE; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; HELICOBACTER INFECTION; HELICOBACTER PYLORI; HUMAN; HUMAN TISSUE; MALE; MICROARRAY ANALYSIS; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN EXPRESSION; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; STOMACH ANTRUM; STOMACH MUCOSA; UPREGULATION;

HELICOBACTER PYLORI;

EID: 84864033993     PISSN: 1198743X     EISSN: 14690691     Source Type: Journal    
DOI: 10.1111/j.1469-0691.2012.03849.x     Document Type: Article

References (35)

1. Linz B, Balloux F, Moodley Y et al. An african origin for the intimate association between humans and Helicobacter pylori. Nature 2007; 445: 915-918.
2. Hansson LE, Nyren O, Hsing AW et al. The risk of stomach cancer in patients with gastric or duodenal ulcer disease. N Engl J Med 1996; 335: 242-249.
3. Fox JG, Wang TC. Inflammation, atrophy, and gastric cancer. J Clin Invest 2007; 117: 60-69.
4. Eddy SR. Non-coding RNA genes and the modern RNA world. Nat Rev Genet 2001; 2: 919-929.
5. Matera AG, Terns RM, Terns MP. Non-coding RNAs: lessons from the small nuclear and small nucleolar RNAs. Nat Rev Mol Cell Biol 2007; 8: 209-220.
6. Ambros V. The functions of animal microRNAs. Nature 2004; 431: 350-355.
7. Lee RC, Feinbaum RL, Ambros V. The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14. Cell 1993; 75: 843-854.
8. Calin GA, Croce CM. MicroRNA signatures in human cancers. Nat Rev Cancer 2006; 6: 857-866.
9. Wu WK, Lee CW, Cho CH et al. MicroRNA dysregulation in gastric cancer: a new player enters the game. Oncogene 2010; 29: 5761-5771.
10. Belair C, Darfeuille F, Staedel C. Helicobacter pylori and gastric cancer: possible role of microRNAs in this intimate relationship. Clin Microbiol Infect 2009; 15: 806-812.
11. Matsushima K, Isomoto H, Inoue N et al. MicroRNA signatures in Helicobacter pylori-infected gastric mucosa. Int J Cancer 2011; 128: 361-370.
12. Xiao B, Liu Z, Li BS et al. Induction of microRNA-155 during Helicobacter pylori infection and its negative regulatory role in the inflammatory response. J Infect Dis 2009; 200: 916-925.
13. Landgraf P, Rusu M, Sheridan R et al. A mammalian microRNA expression atlas based on small RNA library sequencing. Cell 2007; 129: 1401-1414.
14. Petriv OI, Kuchenbauer F, Delaney AD et al. Comprehensive microRNA expression profiling of the hematopoietic hierarchy. Proc Natl Acad Sci USA 2010; 107: 15443-15448.
15. Ruijter JM, Ramakers C, Hoogaars WM et al. Amplification efficiency: linking baseline and bias in the analysis of quantitative PCR data. Nucleic Acids Res 2009; 37: e45.
16. Edgar R, Domrachev M, Lash AE. Gene expression omnibus: NCBI gene expression and hybridization array data repository. Nucleic Acids Res 2002; 30: 207-210.
17. Bhattacharyya S, Balakathiresan NS, Dalgard C et al. Elevated miR-155 promotes inflammation in cystic fibrosis by driving hyperexpression of interleukin-8. J Biol Chem 2011; 286: 11604-11615.
18. O'Neill LA, Sheedy FJ, McCoy CE. MicroRNAs: the fine-tuners of toll-like receptor signalling. Nat Rev Immunol 2011; 11: 163-175.
19. Perry MM, Moschos SA, Williams AE, Shepherd NJ, Larner-Svensson HM, Lindsay MA. Rapid changes in microRNA-146a expression negatively regulate the IL-1beta-induced inflammatory response in human lung alveolar epithelial cells. J Immunol 2008; 180: 5689-5698.
20. Tang B, Xiao B, Liu Z et al. Identification of MyD88 as a novel target of miR-155, involved in negative regulation of Helicobacter pylori-induced inflammation. FEBS Lett 2010; 584: 1481-1486.
21. Ceppi M, Pereira PM, Dunand-Sauthier I et al. MicroRNA-155 modulates the interleukin-1 signaling pathway in activated human monocyte-derived dendritic cells. Proc Natl Acad Sci USA 2009; 106: 2735-2740.
22. Hofman VJ, Moreilhon C, Brest PD et al. Gene expression profiling in human gastric mucosa infected with Helicobacter pylori. Mod Pathol 2007; 20: 974-989.
23. Suerbaum S, Josenhans C. Helicobacter pylori evolution and phenotypic diversification in a changing host. Nat Rev Microbiol 2007; 5: 441-452.
24. Git A, Dvinge H, Salmon-Divon M et al. Systematic comparison of microarray profiling, real-time PCR, and next-generation sequencing technologies for measuring differential microRNA expression. RNA 2010; 16: 991-1006.
25. Sabroe I, Dower SK, Whyte MK. The role of toll-like receptors in the regulation of neutrophil migration, activation, and apoptosis. Clin Infect Dis 2005; 41 (Suppl 7): S421-S426.
26. Rad R, Brenner L, Krug A et al. Toll-like receptor-dependent activation of antigen-presenting cells affects adaptive immunity to Helicobacter pylori. Gastroenterology 2007; 133: 150-163.
27. Fassi Fehri L, Koch M, Belogolova E et al. Helicobacter pylori induces miR-155 in T cells in a cAMP-Foxp3-dependent manner. PLoS ONE 2010; 5: e9500.
28. O'Connell RM, Kahn D, Gibson WS et al. MicroRNA-155 promotes autoimmune inflammation by enhancing inflammatory T cell development. Immunity 2010; 33: 607-619.
29. Lawrie CH. MicroRNA expression in lymphoma. Expert Opin Biol Ther 2007; 7: 1363-1374.
30. Taganov KD, Boldin MP, Chang KJ, Baltimore D. NF-kappaB-dependent induction of microRNA miR-146, an inhibitor targeted to signaling proteins of innate immune responses. Proc Natl Acad Sci USA 2006; 103: 12481-12486.
31. Liu Z, Xiao B, Tang B et al. Up-regulated microRNA-146a negatively modulate Helicobacter pylori-induced inflammatory response in human gastric epithelial cells. Microbes Infect 2010; 12: 854-863.
32. Zhang X, Zhu W, Zhang J et al. MicroRNA-650 targets ING4 to promote gastric cancer tumorigenicity. Biochem Biophys Res Commun 2010; 395: 275-280.
33. Feng L, Xie Y, Zhang H, Wu Y. Down-regulation of NDRG2 gene expression in human colorectal cancer involves promoter methylation and microRNA-650. Biochem Biophys Res Commun 2011; 406: 534-538.
34. Cover TL, Blaser MJ. Helicobacter pylori in health and disease. Gastroenterology 2009; 136: 1863-1873.
35. Ramirez-Lazaro MJ, Lario S, Casalots A et al. Real-time PCR improves Helicobacter pylori detection in patients with peptic ulcer bleeding. PLoS One 2011; 6: e20009.