-
1
-
-
77949537758
-
Testing for mean and correlation changes in microarray experiments: an application for pathway analysis
-
Alvo M, Liu Z, Williams A, Yauk C. 2010. Testing for mean and correlation changes in microarray experiments: an application for pathway analysis. BMC Bioinform 11: 60.
-
(2010)
BMC Bioinform
, vol.11
, pp. 60
-
-
Alvo, M.1
Liu, Z.2
Williams, A.3
Yauk, C.4
-
2
-
-
0001677717
-
Controlling the false discovery rate: A practival and powerful approach to multiple testing
-
Benjamini Y, Hochberg Y. 1995. Controlling the false discovery rate: A practival and powerful approach to multiple testing. J Royal Stat Soc Series B (Methodological) 57: 289-300.
-
(1995)
J Royal Stat Soc Series B (Methodological)
, vol.57
, pp. 289-300
-
-
Benjamini, Y.1
Hochberg, Y.2
-
3
-
-
84861463226
-
Hepatic and pulmonary toxicogenomic profiles in mice intratracheally instilled with carbon black nanoparticles reveal inflammation, acute phase response and alterations in lipid homeostasis
-
Bourdon J, Halappanavar S, Saber A, Jacobsen N, Williams A, Wallin H, Vogel U, Yauk C. 2012a. Hepatic and pulmonary toxicogenomic profiles in mice intratracheally instilled with carbon black nanoparticles reveal inflammation, acute phase response and alterations in lipid homeostasis. Toxicol Sci 127: 414-484.
-
(2012)
Toxicol Sci
, vol.127
, pp. 414-484
-
-
Bourdon, J.1
Halappanavar, S.2
Saber, A.3
Jacobsen, N.4
Williams, A.5
Wallin, H.6
Vogel, U.7
Yauk, C.8
-
4
-
-
84856505316
-
Carbon black nanoparticle instillation induces sustained inflammation and genotoxicity in mouse lung and liver
-
Bourdon J, Saber A, Jacobsen N, Jensen K, Madsen A, Lamson J, Wallin H, Moller P, Loft S, Yauk C, et al., 2012b. Carbon black nanoparticle instillation induces sustained inflammation and genotoxicity in mouse lung and liver. Particle Fibre Toxicol 9: 5.
-
(2012)
Particle Fibre Toxicol
, vol.9
, pp. 5
-
-
Bourdon, J.1
Saber, A.2
Jacobsen, N.3
Jensen, K.4
Madsen, A.5
Lamson, J.6
Wallin, H.7
Moller, P.8
Loft, S.9
Yauk, C.10
-
6
-
-
79955575393
-
Down-regulation of BRCA1 expression by miR-146a and miR-146b-5p in triple negative sporadic breast cancers
-
Garcia A, Buisson M, Bertrand P, Rimokh R, Rouleau E, Lopez B, Lidereau R, Mikaelian I, Mazoyer S. 2011. Down-regulation of BRCA1 expression by miR-146a and miR-146b-5p in triple negative sporadic breast cancers. EMBO Mol Med 3: 279-290.
-
(2011)
EMBO Mol Med
, vol.3
, pp. 279-290
-
-
Garcia, A.1
Buisson, M.2
Bertrand, P.3
Rimokh, R.4
Rouleau, E.5
Lopez, B.6
Lidereau, R.7
Mikaelian, I.8
Mazoyer, S.9
-
7
-
-
77955644289
-
Mammalian microRNAs predominantly act to decrease target mRNA levels
-
Guo H, Ingolia NT, Weissman JS, Bartel DP. 2010. Mammalian microRNAs predominantly act to decrease target mRNA levels. Nature 466: 835-841.
-
(2010)
Nature
, vol.466
, pp. 835-841
-
-
Guo, H.1
Ingolia, N.T.2
Weissman, J.S.3
Bartel, D.P.4
-
8
-
-
79959904775
-
Pulmonary response to surface-coated nanotitanium dioxide particles includes induction of acute phase response genes, inflammatory cascades, and changes in microRNAs: A toxicogenomics study
-
Halappanavar S, Jackson P, Williams A, Jensen K, Hougaard K, Vogel U, Yauk C, Wallin H. 2011. Pulmonary response to surface-coated nanotitanium dioxide particles includes induction of acute phase response genes, inflammatory cascades, and changes in microRNAs: A toxicogenomics study. Environ Mol Mutagene 52: 425-439.
-
(2011)
Environ Mol Mutagene
, vol.52
, pp. 425-439
-
-
Halappanavar, S.1
Jackson, P.2
Williams, A.3
Jensen, K.4
Hougaard, K.5
Vogel, U.6
Yauk, C.7
Wallin, H.8
-
9
-
-
84863785207
-
-
IARC. IARC monographs. 93.
-
IARC. 1996. IARC monographs. 93.
-
(1996)
-
-
-
10
-
-
81255132017
-
Pulmonary exposure to carbon black by inhalation or instillation in pregnant mice: Effects on liver DNA strand breaks in dams and offspring
-
Jackson P, Hougaard K, Boisen A, Jacobsen N, Jensen K, Moller P, Brunborg G, Gutzkow B, Andersen O, Loft S, et al., 2011a. Pulmonary exposure to carbon black by inhalation or instillation in pregnant mice: Effects on liver DNA strand breaks in dams and offspring. Nanotoxicology 745: 78-83.
-
(2011)
Nanotoxicology
, vol.745
, pp. 78-83
-
-
Jackson, P.1
Hougaard, K.2
Boisen, A.3
Jacobsen, N.4
Jensen, K.5
Moller, P.6
Brunborg, G.7
Gutzkow, B.8
Andersen, O.9
Loft, S.10
-
11
-
-
84860443650
-
Exposure of pregnant mice to carbon black by intratracheal instillation: Toxicogenomic effect in dams and offspring
-
DOI: 10.1016/j.mrgentox.2011.09.018.
-
Jackson P, Hougaard K, Vogel U, Wu D, Casavant L, Williams A, Wade M, Yauk C, Wallin H, Halappanavar S. 2011b. Exposure of pregnant mice to carbon black by intratracheal instillation: Toxicogenomic effect in dams and offspring. Mutat Res Gene Toxicol Environ Mutagenesis DOI: 10.1016/j.mrgentox.2011.09.018.
-
(2011)
Mutat Res Gene Toxicol Environ Mutagenesis
-
-
Jackson, P.1
Hougaard, K.2
Vogel, U.3
Wu, D.4
Casavant, L.5
Williams, A.6
Wade, M.7
Yauk, C.8
Wallin, H.9
Halappanavar, S.10
-
12
-
-
61349143153
-
Lung inflammation and genotoxicity following pulmonary exposure to nanoparticles in ApoE-/- mice
-
Jacobsen N, Moller P, Jensen K, Vogel U, Ladefoged O, Loft S, Wallin H. 2009. Lung inflammation and genotoxicity following pulmonary exposure to nanoparticles in ApoE-/- mice. Particle Fibre Toxicol 6: 2.
-
(2009)
Particle Fibre Toxicol
, vol.6
, pp. 2
-
-
Jacobsen, N.1
Moller, P.2
Jensen, K.3
Vogel, U.4
Ladefoged, O.5
Loft, S.6
Wallin, H.7
-
13
-
-
48249096280
-
Genotoxicity, cytotoxicity and reactive oxygen species induced by single-walled carbon nanotubes and C60 fullerenes in the FE1-MutaTMMouse lung epithelial cells
-
Jacobsen N, Pojana G, White P, Moller P, Cohn C, Korsholm K, Vogel U, Marcomini A, Loft S, Wallin H. 2008. Genotoxicity, cytotoxicity and reactive oxygen species induced by single-walled carbon nanotubes and C60 fullerenes in the FE1-MutaTMMouse lung epithelial cells. Environ Mol Mutagene 49: 476-487.
-
(2008)
Environ Mol Mutagene
, vol.49
, pp. 476-487
-
-
Jacobsen, N.1
Pojana, G.2
White, P.3
Moller, P.4
Cohn, C.5
Korsholm, K.6
Vogel, U.7
Marcomini, A.8
Loft, S.9
Wallin, H.10
-
14
-
-
34547619387
-
Increased mutant frequency by carbon black, but not quartz, in the LacZ and cII transgenes of MutaMouse lung epithelial cells
-
Jacobsen N, Saber A, White P, Pojana G, Vogel U, Loft S, Gingerich J, Soper L, Douglas G, Wallin H. 2007. Increased mutant frequency by carbon black, but not quartz, in the LacZ and cII transgenes of MutaMouse lung epithelial cells. Environ Mol Mutagene 48: 451-461.
-
(2007)
Environ Mol Mutagene
, vol.48
, pp. 451-461
-
-
Jacobsen, N.1
Saber, A.2
White, P.3
Pojana, G.4
Vogel, U.5
Loft, S.6
Gingerich, J.7
Soper, L.8
Douglas, G.9
Wallin, H.10
-
15
-
-
74949132184
-
Disruption of microRNA expression in human airway cells by diesel exhaust particles is linked to tumorigenesis-associated pathways
-
Jarim M, Fry R, Jaspers I, Dailey L, Diaz-Sanchez D. 2009. Disruption of microRNA expression in human airway cells by diesel exhaust particles is linked to tumorigenesis-associated pathways. Environ Health Perspect 117: 1745-1751.
-
(2009)
Environ Health Perspect
, vol.117
, pp. 1745-1751
-
-
Jarim, M.1
Fry, R.2
Jaspers, I.3
Dailey, L.4
Diaz-Sanchez, D.5
-
16
-
-
77955925161
-
MicroRNAs and their implications in toxicological research
-
Lema C, Cunningham M. 2010. MicroRNAs and their implications in toxicological research. Toxicol Lett 198: 100-105.
-
(2010)
Toxicol Lett
, vol.198
, pp. 100-105
-
-
Lema, C.1
Cunningham, M.2
-
17
-
-
11844278458
-
Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets
-
Lewis B, Burge C, Bartel D. 2005. Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets. Cell 120: 15-20.
-
(2005)
Cell
, vol.120
, pp. 15-20
-
-
Lewis, B.1
Burge, C.2
Bartel, D.3
-
18
-
-
80053128746
-
Assessment of nanomaterial cytotoxicity with SOLiD sequencing-based microRNA expression profiling
-
Li S, Wang H, Qi Y, Tu J, Bai Y, Tian T, Huang N, Wang Y, Xiong F, Lu Z, et al., 2011a. Assessment of nanomaterial cytotoxicity with SOLiD sequencing-based microRNA expression profiling. Biomaterials 32: 9021-9030.
-
(2011)
Biomaterials
, vol.32
, pp. 9021-9030
-
-
Li, S.1
Wang, H.2
Qi, Y.3
Tu, J.4
Bai, Y.5
Tian, T.6
Huang, N.7
Wang, Y.8
Xiong, F.9
Lu, Z.10
-
19
-
-
79952757232
-
MicroRNAs as participants in cytotoxicity of CdTe quantum dots in NIH/3T3 cells
-
Li S, Wang Y, Wang H, Bai Y, Liang G, Wang Y, Huang N, Xiao Z. 2011b. MicroRNAs as participants in cytotoxicity of CdTe quantum dots in NIH/3T3 cells. Biomaterials 32: 3807-3814.
-
(2011)
Biomaterials
, vol.32
, pp. 3807-3814
-
-
Li, S.1
Wang, Y.2
Wang, H.3
Bai, Y.4
Liang, G.5
Wang, Y.6
Huang, N.7
Xiao, Z.8
-
20
-
-
65249106172
-
MicroRNA-21 is up-regulated in allergic airway inflammation and regulates IL-12p35 expression
-
Lu T, Munitz A, Rothenberg M. 2009. MicroRNA-21 is up-regulated in allergic airway inflammation and regulates IL-12p35 expression. J Immunol 182: 4994-5002.
-
(2009)
J Immunol
, vol.182
, pp. 4994-5002
-
-
Lu, T.1
Munitz, A.2
Rothenberg, M.3
-
21
-
-
68649092030
-
MicroRNA: Implication for Alzheimer Disease and other human CNS disorders
-
Maes O, Chertkow H, Wang E, Schipper H. 2009. MicroRNA: Implication for Alzheimer Disease and other human CNS disorders. Curr Genomics 10: 154-168.
-
(2009)
Curr Genomics
, vol.10
, pp. 154-168
-
-
Maes, O.1
Chertkow, H.2
Wang, E.3
Schipper, H.4
-
22
-
-
80054917299
-
Nanostructural materials increase mineralization in bone cells and affect gene expression through miRNA regulation
-
Mahmood M, Li Z, Casciano D, Khodakovskaya M, Chen T, Karmakar A, Dervishi E, Xu Y, Mustafa T, Watanabe F, et al., 2011. Nanostructural materials increase mineralization in bone cells and affect gene expression through miRNA regulation. J Cell Mol Med 15: 2297-2306.
-
(2011)
J Cell Mol Med
, vol.15
, pp. 2297-2306
-
-
Mahmood, M.1
Li, Z.2
Casciano, D.3
Khodakovskaya, M.4
Chen, T.5
Karmakar, A.6
Dervishi, E.7
Xu, Y.8
Mustafa, T.9
Watanabe, F.10
-
23
-
-
79954512423
-
Differential expression of microRNAs in tumors from chronically inflammed mice or genetic (APC Min/+) models of colon cancer
-
Necela B, Carr J, Asmann Y, Thompson E. 2011. Differential expression of microRNAs in tumors from chronically inflammed mice or genetic (APC Min/+) models of colon cancer. PLoS ONE 6: 4.
-
(2011)
PLoS ONE
, vol.6
, pp. 4
-
-
Necela, B.1
Carr, J.2
Asmann, Y.3
Thompson, E.4
-
24
-
-
80051549593
-
The induction of epigenetic regulation of PROS1 gene in lung fibroblasts by gold nanoparticles and implications for potential lung injury
-
Ng C-T, Dheen T, Yip W-C, Ong C-N, Bay B-H, Yung L-Y. 2011. The induction of epigenetic regulation of PROS1 gene in lung fibroblasts by gold nanoparticles and implications for potential lung injury. Biomaterials 32: 7609-7615.
-
(2011)
Biomaterials
, vol.32
, pp. 7609-7615
-
-
Ng, C.-T.1
Dheen, T.2
Yip, W.-C.3
Ong, C.-N.4
Bay, B.-H.5
Yung, L.-Y.6
-
26
-
-
67650754354
-
DIANA-mirPath: Integrating human and mouse microRNAs in pathways
-
Papadopoulos GL, Alexiou P, Maragkakis M, Reczko M, Hatzigeorgiou AG. 2009b. DIANA-mirPath: Integrating human and mouse microRNAs in pathways. Bioinformatics 25: 1991-1993.
-
(2009)
Bioinformatics
, vol.25
, pp. 1991-1993
-
-
Papadopoulos, G.L.1
Alexiou, P.2
Maragkakis, M.3
Reczko, M.4
Hatzigeorgiou, A.G.5
-
27
-
-
54249136806
-
MicroRNA-21 targets a network of key tumor-suppressive pathways in glioblastoma cells
-
Papagiannakopoulos T, Shapiro A, Kosik K. 2008. MicroRNA-21 targets a network of key tumor-suppressive pathways in glioblastoma cells. Cancer Res 68: 8164-8172.
-
(2008)
Cancer Res
, vol.68
, pp. 8164-8172
-
-
Papagiannakopoulos, T.1
Shapiro, A.2
Kosik, K.3
-
28
-
-
84858446579
-
MicroRNAs and their targets: Recognition, regulation and an emerging reciprocal relationship
-
Pasquinelli AE. 2012. MicroRNAs and their targets: Recognition, regulation and an emerging reciprocal relationship. Nat Rev 13: 271-282.
-
(2012)
Nat Rev
, vol.13
, pp. 271-282
-
-
Pasquinelli, A.E.1
-
29
-
-
60849111385
-
Impact of normalization on miRNA microarray expression profiling
-
Pradervand S, Weber J, Thomas J, Bueno M, Wirapati P, Lefort K, Dotto GP, Harshman K. 2012. Impact of normalization on miRNA microarray expression profiling. RNA 15: 493-501.
-
(2012)
RNA
, vol.15
, pp. 493-501
-
-
Pradervand, S.1
Weber, J.2
Thomas, J.3
Bueno, M.4
Wirapati, P.5
Lefort, K.6
Dotto, G.P.7
Harshman, K.8
-
31
-
-
79551625082
-
MicroRNAs in resolution of acute inflammation: identification of novel resolvin D1-miRNA circuits
-
Recchiuti A, Krishnamoorthy S, Fredman G, Chiang N, Serhan C. 2011. MicroRNAs in resolution of acute inflammation: identification of novel resolvin D1-miRNA circuits. J Federation Am Soc Exp Biol 25: 544-560.
-
(2011)
J Federation Am Soc Exp Biol
, vol.25
, pp. 544-560
-
-
Recchiuti, A.1
Krishnamoorthy, S.2
Fredman, G.3
Chiang, N.4
Serhan, C.5
-
32
-
-
84857788235
-
Inflammatory and genotoxic effects of nanoparticles designed for inclusion in paints and laquers
-
DOI: 10.3109/17435390.17432011.17587900.
-
Saber A, Jensen K, Jacobsen N, Birkedal R, Mikkelsen L, Moller P, Loft S, Wallin H, Vogel U. 2011. Inflammatory and genotoxic effects of nanoparticles designed for inclusion in paints and laquers. Nanotoxicology DOI: 10.3109/17435390.17432011.17587900.
-
(2011)
Nanotoxicology
-
-
Saber, A.1
Jensen, K.2
Jacobsen, N.3
Birkedal, R.4
Mikkelsen, L.5
Moller, P.6
Loft, S.7
Wallin, H.8
Vogel, U.9
-
33
-
-
33747608638
-
NF-kB-dependant induction of microRNA miR-146, an inhibitor targeted to signaling proteins of innate immune responses
-
Taganov K, Boldin M, Chang K-J, Baltimore D. 2006. NF-kB-dependant induction of microRNA miR-146, an inhibitor targeted to signaling proteins of innate immune responses. Proc Natl Acad Sci 103: 12481-12486.
-
(2006)
Proc Natl Acad Sci
, vol.103
, pp. 12481-12486
-
-
Taganov, K.1
Boldin, M.2
Chang, K.-J.3
Baltimore, D.4
-
34
-
-
36749026906
-
Switching from repression to activation: MicroRNAs can up-regulate translation
-
Vasudevan S, Tong Y, Steitz JA. 2007. Switching from repression to activation: MicroRNAs can up-regulate translation. Science 318: 1931-1934.
-
(2007)
Science
, vol.318
, pp. 1931-1934
-
-
Vasudevan, S.1
Tong, Y.2
Steitz, J.A.3
-
35
-
-
0242291496
-
MAANOVA: A software package for the analysis of spotted cDNA microarray experiments
-
Wu H, Kerr M, Cui X, Churchill G. 2003. MAANOVA: A software package for the analysis of spotted cDNA microarray experiments. Anal Gene Expression Data 313-431.
-
(2003)
Anal Gene Expression Data
, pp. 313-431
-
-
Wu, H.1
Kerr, M.2
Cui, X.3
Churchill, G.4
-
36
-
-
67349107523
-
MicroRNA-146b inhibits glioma cell migration and invasion by targeting MMPs
-
Xia H, Qi Y, Ng S, Chen X, Li D, Chen S, Ge R, Jiang S, Li G, Chen Y, et al., 2009. MicroRNA-146b inhibits glioma cell migration and invasion by targeting MMPs. Brain Res 1269: 158-165.
-
(2009)
Brain Res
, vol.1269
, pp. 158-165
-
-
Xia, H.1
Qi, Y.2
Ng, S.3
Chen, X.4
Li, D.5
Chen, S.6
Ge, R.7
Jiang, S.8
Li, G.9
Chen, Y.10
-
37
-
-
77956622979
-
MicroRNA-21 is involved in ionizing radiation-promoted liver carcinogenesis
-
Zhu Y, Yu X, Fu H, Wang H, Wang P, Zheng X, Wang Y. 2010. MicroRNA-21 is involved in ionizing radiation-promoted liver carcinogenesis. Int J Clin Exp Med 3: 211-222.
-
(2010)
Int J Clin Exp Med
, vol.3
, pp. 211-222
-
-
Zhu, Y.1
Yu, X.2
Fu, H.3
Wang, H.4
Wang, P.5
Zheng, X.6
Wang, Y.7
|