Profiling the main cell wall polysaccharides of tobacco leaves using high-throughput and fractionation techniques

Carbohydrate Polymers

Volumn 88, Issue 3, 2012, Pages 939-949

  Nguema Ona, Eric ^a   Moore, John P ^a   Fagerström, Alexandra ^b   Fangel, Jonatan U ^b   Willats, William G T ^b   Hugo, Annatjie ^a   Vivier, Melané A ^a  

^a STELLENBOSCH UNIVERSITY   (South Africa)

^b UNIVERSITY OF COPENHAGEN   (Denmark)

Author keywords

Arabinoxyloglucan; Cell wall polysaccharides; Endopolygalacturonase (EPG); Pectin rich; Profiling; Tobacco leaves; Xyloglucan specific endoglucanase (XEG)

Indexed keywords

ARABINOXYLOGLUCAN; CELL WALL POLYSACCHARIDES; ENDOGLUCANASES; ENDOPOLYGALACTURONASE (EPG); PECTIN-RICH; PROFILING; TOBACCO LEAVES;

CELLS; CYTOLOGY; DIAGNOSIS; POLYMERS; POLYSACCHARIDES;

TOBACCO;

LYCOPERSICON ESCULENTUM; NICOTIANA; NICOTIANA TABACUM; PAENIBACILLUS; PAENIBACILLUS SP.; SOLANACEAE; SOLANUM TUBEROSUM; TRICHODERMA;

EID: 84863419361     PISSN: 01448617     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.carbpol.2012.01.044     Document Type: Article

References (40)

1. P. Albersheim, A. Darvill, K. Roberts, R. Sederoff, and A. Staehelin Plant cell walls: From chemistry to biology 2011 Garland Science USA pp. 365-407
2. L.V. Bindschedler, J. Tuerck, M. Maunders, K. Ruel, M. Petit-Conil, and S. Danoun Modification of hemicellulose content by antisense down-regulation of UDP-glucuronate decarboxylase in tobacco and its consequences for cellulose extractability Phytochemistry 68 2007 2635 2648 (Pubitemid 47628766)
3. A.B. Blakeney, P.J. Harris, R.J. Henry, and B.A. Stone A simple and rapid preparation of alditol acetates for monosaccharide analysis Carbohydrate Research 113 1983 291 299
4. K.H. Caffall, S. Pattathil, S.E. Phillips, M.G. Hahn, and D. Mohnen Arabidopsis thaliana T-DNA mutants implicate GAUT genes in the biosynthesis of pectin and xylan in cell walls and seed testa Molecular Plant 2 2009 1000 1014
5. C. Capodicasa, D. Vairo, O. Zabotina, L. McCartney, C. Caprari, and B. Mattei Targeted modification of homogalacturonan by transgenic expression of a fungal polygalacturonase alters plant growth Plant Physiology 135 2004 1294 1304 (Pubitemid 39009378)
6. N.C. Carpita, and E.M. Shea Linkage structure of carbohydrate by gas chromatography-mass spectrometry (GC-MS) of partially methylated alditol acetates C.J. Biermann, G.D. McGinnis, Analysis of carbohydrates by gas-liquid chromatography and mass spectrometry 1989 CRC Press Florida, Boca Ranton 157 216
7. I. Ciucanu, and F. Kerek A simple and rapid method for the permethylation of carbohydrates Carbohydrate Research 131 1984 209 217
8. S. Eda, F. Watanabe, and K. Kato 4-O-methyl glucuronoxylan from the midrib of Nicotiana tabacum Agricultural and Biological Chemistry 41 1977 429 434 (Pubitemid 8098213)
9. S. Eda, and K. Kato An arabinoxyloglucan isolated from the midrib of the leaves of Nicotiana tabacum Agricultural and Biological Chemistry 42 1978 351 357 (Pubitemid 8335350)
10. S. Eda, and K. Kato Pectin isolated from the midrib of leaves of Nicotiana tabacum Agricultural and Biological Chemistry 44 1980 2793 2801
11. S. Eda, K. Kato, A. Ishizu, and J. Nakano An acidic polysaccharide isolated from the midrib of leaves of Nicotiana tabacum Agricultural and Biological Chemistry 46 1982 1783 1790
12. S. Eda, K. Miyabe, Y. Akiyama, A. Ohnishi, and K. Kato A pectic polysaccharide from cell walls of tobacco (Nicotiana tabacum) mesophyll Carbohydrate Research 158 1986 205 216
13. P.K. Foreman, D. Brown, L. Dankmeyer, R. Dean, S. Diener, and N.S. Dunn-Colemann Transcriptional regulation of biomass-degrading enzymes in the filamentous fungus Trichoderma reseei Journal of Biological Chemistry 278 2003 31988 31997 (Pubitemid 37048387)
14. S.C. Fry The growing plant cell wall. Chemical and metabolic analysis 1988 Longman Scientific and Technical Essex, England
15. S.C. Fry Cell wall composition polysaccharide and covalent crosslinking Annual Plant Reviews on Plant Polysaccharides: Biosynthesis and Bio-engineering 41 2011 1 42
16. S.G. Grishutin, A.V. Gusakov, A.V. Markov, B.B. Ustinov, M.V. Semenova, and A.P. Sinitsyn Specific xyloglucanases as a new class of polysaccharide- degrading enzymes Biochimica et Biophysica Acta 1674 2004 268 281 (Pubitemid 39469286)
17. J. Harholt, J.K. Jensen, S.O. Sorensen, C. Orfila, M. Pauly, and H.V. Scheller Arabinan deficient 1 is a putative arabinosyltransferase involved in biosynthesis of pectic arabinan in Arabidopsis Plant Physiology 140 2006 49 58 (Pubitemid 43956301)
18. C. Hervé, S.E. Marcus, and J.P. Knox Monoclonal antibodies, carbohydrate-binding modules, and the detection of polysaccharides in plant cell walls Z. Popper, The plant cell wall: Methods and protocols 2011 Humana Press Berlin, Springer 103 113
19. N.M. Iraki, R.A. Bressan, and N.C. Carpita Extracellular polysaccharides and proteins of tobacco cell cultures and changes in composition associated with growth-limiting adaptation to water and saline stress Plant Physiology 91 1989 54 61
20. M. Kacurakova, P. Capek, V. Sasinkova, N. Wellner, and A. Ebringerova FT-IR study of plant cell wall model compound: Pectic polysaccharides and hemicelluloses Carbohydrate Polymers 43 2000 195 203
21. J.P. Knox The use of antibodies to study the architecture and developmental regulation of plant cell walls International Review of Cytology 171 1997 79 120 (Pubitemid 27135709)
22. O. Lerouxel, T.S. Choo, M. Séveno, B. Usadel, L. Faye, and P. Lerouge Rapid structural phenotyping of plant cell wall mutants by enzymatic oligosaccharide fingerprinting Plant Physiology 130 2002 1754 1763 (Pubitemid 36035173)
23. E. Lupotto, and M.R. Stile Molecular farming in plants: An update Biotechnology and Sustainable Agriculture 2006 and Beyond 18 2007 389 396
24. G. Mouille, S. Robin, M. Leconte, S. Pagant, and H. Höfte Classification and identification of Arabidopsis cell wall mutants using Fourier-transform infrared (FT-IR) microspectroscopy The Plant Journal 35 2003 393 404 (Pubitemid 36990641)
25. I. Moller, I. Sørensen, A. Bernal, C. Blaukopf, K. Lee, and J. Øbro High-throughput mapping of cell-wall polymers within and between plants using novel microarrays Plant Journal 50 2007 1118 1128 (Pubitemid 46904116)
26. M. Mori, S. Eda, and K. Kato Two xyloglucan oligosaccharides obtained by cellulose degradation of tobacco arabinoxyloglucan Agricultural and Biological Chemistry 43 1979 145 149
27. T. Murashige, and F. Skoog A revised medium for rapid growth and bioassays with tobacco tissue cultures Physiologia Plantarum 15 1962 473 497
28. E. Nguema-Ona, C. Andeme-Onzighi, S. Aboughe-Angone, M. Bardor, T. Ishii, and P. Lerouge The reb1-1 mutation of Arabidopsis. Effect on the structure and localization of galactose-containing cell wall polysaccharides Plant Physiology 140 2006 1406 1417 (Pubitemid 43956225)
29. N.H. Packer, M.A. Lawson, D.R. Jardine, and J.W. Redmond A general approach to desalting oligosaccharides released from glycoproteins Glycoconjugate Journal 15 1998 737 747 (Pubitemid 28528770)
30. S. Persson, I. Sorensen, I. Moller, W. Willats, and M. Pauly Dissection of plant cell walls by high-throughput methods Annual Plant Reviews on Plant Polysaccharides: Biosynthesis and Bio-engineering 41 2011 43 64
31. W.D. Reiter, C. Chapple, and C.R. Somerville Altered growth and cell walls in a fucose-deficient mutant of Arabidopsis Science 261 1993 1032 1035 (Pubitemid 23300860)
32. W-D. Reiter, C. Chapple, and C. Somerville Mutant of Arabidopsis thaliana with altered cell wall polysaccharide composition The Plant Journal 12 1997 335 345 (Pubitemid 27389622)
33. H.A. Schols, and A.G.J. Voragen The chemical structure of pectins G.B. Seymour, J.P. Knox, Pectins and their manipulation 2003 CRC Press 1 29
34. I. Sims, S. Munro, G. Currie, D. Craik, and A. Bacic Structural characterization of xyloglucan secreted by suspension-cultured cells of Nicotiana plumbaginifolia Carbohydrate Research 293 1996 147 172 (Pubitemid 26362728)
35. J.P. Vincken, W. York, G. Beldman, and A. Voragen Two general branching patterns of xyloglucan, XXXG and XXGG Plant Physiology 114 1997 9 13 (Pubitemid 28110889)
36. G. Wang, Y. Gao, J. Wang, L. Yang, R. Song, and X. Li Overexpression of two cambium-abundant Chinese fir (Cunninghamia lanceolata) α-expansin genes ClEXPA1 and ClEXPA2 affect growth and development in transgenic tobacco and increase the amount of cellulose in stem cell walls Plant Biotechnology Journal 9 2011 486 502
37. K. Yaoi, T. Nakai, Y. Kamed, A. Hiyoshi, and Y. Mitsuishi Cloning and characterization of two xyloglucanases from Paenibacilus sp. Strain KM21 Applied and Environmental Microbiology 71 2005 7670 7678 (Pubitemid 41803886)
38. W.S. York, A.G. Darvill, M. McNeil, T.T. Stevenson, and P. Albersheim Isolation and characterization of plant cell walls and cell wall components Methods in Enzymology 118 1985 3 40
39. W.S. York, V. Kumar Kolli, R. Orlando, P. Albersheim, and A. Darvill The structures of arabinoxyloglucans produced by solaneceous plants Carbohydrate Research 285 1996 99 128 (Pubitemid 26172220)
40. E. Zablackis, J. Huang, B. Müller, A.G. Darvill, and P. Albersheim Characterization of the cell-wall polysaccharides of Arabidopsis thaliana leaves Plant Physiology 107 1995 1129 1138