Cloning and characterization of two xyloglucanases from Paenibacillus sp. strain KM21

Applied and Environmental Microbiology

Volumn 71, Issue 12, 2005, Pages 7670-7678

  Yaoi, Katsuro ^a   Nakai, Tomonori ^b   Kameda, Yoshiro ^c   Hiyoshi, Ayako ^a   Mitsuishi, Yasushi ^a  

^a NATIONAL INSTITUTE OF ADVANCED INDUSTRIAL SCIENCE AND TECHNOLOGY AIST   (Japan)

^b UNIVERSITY OF HYOGO   (Japan)

^c Hokkaido Sugar Co Ltd   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA; BINDING ENERGY; CARBOHYDRATES; ESCHERICHIA COLI; GENES; PROTEINS;

GLYCOSIDIC BONDS; GRAIN-POSITIVE BACTERIUM; OLIGOSACCHARIDES; XYLOGLUCANASES;

ENZYMES;

BACTERIAL ENZYME; CELLULASE; DNA FRAGMENT; GLUCAN; GLUCAN GLUCOSIDASE; GLYCOSIDASE; OLIGOSACCHARIDE; POLYSACCHARIDE; RECOMBINANT ENZYME; UNCLASSIFIED DRUG; XYLOGLUCAN; XYLOGLUCANASE;

MOLECULAR ANALYSIS;

AMINO TERMINAL SEQUENCE; ARTICLE; ENZYME ANALYSIS; ENZYME SPECIFICITY; ENZYME SUBSTRATE; GEL FILTRATION CHROMATOGRAPHY; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; MATRIX ASSISTED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; PAENIBACILLACEAE; POLYMERASE CHAIN REACTION; VISCOMETER;

AMINO ACID SEQUENCE; BACILLACEAE; BACTERIA; CLONING, MOLECULAR; DNA PRIMERS; ELECTROPHORESIS, POLYACRYLAMIDE GEL; GLYCOSIDE HYDROLASES; MOLECULAR SEQUENCE DATA; PEPTIDE FRAGMENTS; POLYMERASE CHAIN REACTION; RECOMBINANT PROTEINS;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; HORDEUM VULGARE SUBSP. VULGARE; PAENIBACILLACEAE; PAENIBACILLUS SP.; TAMARINDUS INDICA;

EID: 29144512462     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.71.12.7670-7678.2005     Document Type: Article

References (33)

1. Augur, C., L. Yu, K. Sakai, T. Ogawa, P. Sinay, A. G. Darvill, and P. Albersheim. 1992. Further studies of the ability of xyloglucan oligosaccharides to inhibit auxin-stimulated growth. Plant Physiol. 99:180-185.
2. Blanco, A., P. Díaz, J. Martínez, T. Vidal, A. L. Torres, and F. I. J. Pastor. 1998. Cloning of a new endoglucanase gene from Bacillus sp. BP-23 and characterisation of the enzyme. Performance in paper manufacture from cereal straw. Appl. Microbiol. Biotechnol. 50:48-54.
3. Reference deleted.
4. Fry, S. C. 1989. The structure and functions of xyloglucan. J. Exp. Biol. 40:1-11.
5. Fry, S. C., W. S. York, P. Albersheim, A. Darvill, T. Hayashi, J. P. Joseleau, Y. Kato, E. P. Lorences, G. A. Maclachlan, M. McNeil, A. J. Mort, J. S. G. Reid, H. U. Seitz, R. R. Selvendran, A. G. J. Voragen, and A. R. White. 1993. An unambiguous nomenclature for xyloglucan-derived oligosaccharides. Physiol. Plant. 89:1-3.
6. Grishutin, S. G., A. V. Gusakov, A. V. Markov, B. B. Ustinov, M. V. Semenova, and A. P. Sinitsyn. 2004. Specific xyloglucanases as a new class of polysaccharide-degrading enzymes. Biochim. Biophys. Acts 1674:268-281.
7. Hasper, A. A., E. Dekkers, M. van Mil, P. J. I. van de Vondervoort, and L. H. de Graaff. 2002. EglC, a new endoglucanase from Aspergillus niger with major activity towards xyloglucan. Appl. Environ. Microbiol. 68:1556-1560.
8. Hayashi, T. 1989. Xyloglucans in the primary-cell wall. Annu. Rev. Plant Physiol. Plant Mol. Biol. 40:139-168.
9. Hayashi, T., K. Ogawa, and Y. Mitsuishi. 1994. Characterization of the adsorption of xyloglucan to cellulose. Plant Cell Physiol. 35:1199-1205.
10. Irwin, D. C., M. Cheng, B. Xiang, J. K. C. Rose, and D. B. Wilson. 2003. Cloning, expression and characterization of a family-74 xyloglucanase from Thermobifida fusca. Eur. J. Biochem. 270:3083-3091.
11. Ito, S., Y. Mitsuishi, T. Okuno, and Y. Kato. 2004. Changes in the structure of xyloglucan of apple fruit during development. J. Jpn. Soc. Hort. Sci. 73:51-56.
12. Kato, Y., S. Ito, and Y. Mitsuishi. 2004. Further structural study of the barley and bamboo shoot xyloglucans by xyloglucanase. J. Appl. Glycosci. 51:327-333.
13. Kato, Y., T. Konishi, Y. Hidano, and Y. Mitsuishi. 2004. Structural analysis of the eggplant xyloglucan by xyloglucanase. J. Appl. Glycosci. 51:93-99.
14. Kato, Y., J. Matsushita, T. Kubodera, and K. Matsuda. 1985. A novel enzyme producing isoprimeverose from oligoxyloglucans of Aspergillus oryzae. J. Biochem. (Tokyo) 97:801-810.
15. Konishi, T., Y. Mitsuishi, and Y. Kato. 1998. Analysis of the oligosaccharide units of xyloglucans by digestion with isoprimeverose-producing oligoxyloglucan hydrolase followed by anion-exchange chromatography. Biosci. Biotechnol. Biochem. 62:2421-2424.
16. Mastromarino, P., R. Petruzziello, S. Macchia, S. Rieti, R. Nicoletti, and N. Orsi. 1997. Antiviral activity of natural and semisynthetic polysaccharides on the early steps of rubella virus infection. J. Antimicrob. Chemother. 39:339-345.
17. McDougall, G. J., and S. C. Fry. 1998. Inhibition of auxin-stimulated growth of pea stem segments by a specific nonasaccharide of xyloglucan. Planta 175:412-415.
18. McDougall, G. J., and S. C. Fry. 1990. xyloglucan oligosaccharides promote growth and activate cellulase-evidence for a role of cellulase in cell expansion. Plant Physiol. 93:1042-1048.
19. Nelson, N. 1944. A photometric adaptation of the Somogyi method for the determination of glucose. J. Biol. Chem. 153:375-380.
20. Somogyi. M. 1945. Anew reagent for determination of sugars. J. Biol. Chem. 160:61-68.
21. Somogyi, M. 1952. Notes on sugar determination. J. Biol. Chem. 195:19-23.
22. Sone, Y., C. Makino, and A. Misaki. 1992. Inhibitory effect of oligosaccharides derived from plant xyloglucan on intestinal glucose-absorption in rat. J. Nutr. Sci. Vitaminol. 38:391-395.
23. Strickland, F. M., A. Darvill, P. Albersheim, S. Eberhard, M. Panly, and R. P, Pelley. 1999. Inhibition of UV-induced immune suppression and interleukin-10 production by plant oligosaccharides and polysaccharides. Photochem. Photobiol. 69:141-147.
24. Strickland, F. M., J. M. Kuchel, and G. M. Halliday. 2004. Natural products as aids for protecting the skin's immune system against UV damage. Cutis 74:24-28.
25. Takeda, T., Y. Furuta, T. Awano, K. Mizuno. Y. Mitsuishi, and T. Hayashi. 2002. Suppression and acceleration of cell elongation by integration of xyloglucans in pea stem segments. Proc. Natl. Acad. Sci. USA 99:9055-9060.
26. Vincken, J. P., W. S. York, G. Beldman, and A. G. J. Voragen. 1997. Two general branching patterns of xyloglucan, XXXG and XXGG. Plant Physiol. 114:9-13.
27. Yamatoya, K., M. Shirakawa, K. Kuwano, J. Suzuki, and T. Mitamura. 1996. Effects of hydrolyzed xyloglucan on lipid metabolism in rats. Food Hydrocoll. 10:369-372.
28. Yaoi, K., H. Kondo, N. Nor, M. Suzuki, S. Tsuda, and Y. Mitsuishi. 2004. Tandem repeat of a seven-bladed β-propeller domain in oligoxyloglucan reducing-end-specific cellobiohydrolase. Structure 12:1209-1217.
29. Yaoi, K., and Y. Mitsuishi. 2004. Purification, characterization. cDNA cloning, and expression of a xyloglucan endoglucanase from Geotrichum sp. M128. FEBS Lett. 560:45-50.
30. Yaoi, K., and Y. Mitsuishi. 2002. Purification, characterization, cloning, and expression of a novel xyloglucan-specific glycosidase, oligoxyloglucan reducing end-specific cellobiohydrolase. J. Biol. Chem. 277:4X276-4X281.
31. York, W. S., A. G. Darvill, and P. Albersheim. 1984. Inhibition of 2,4-dichlorophenoxyacetic acid-stimulated elongation of pea stem segments by a xyloglucan oligosaccharide. Plant Physiol. 75:295-297.
32. York, W. S., and R. Hawkins. 2000. Preparation of oligomeric β-glycosides from cellulose and hemicellulosic polysaccharides via the glycosyl transferase activity of a Trichoderma reesei cellulase. Glycobiology 10:193-201.
33. 1H-NMR spectroscopy and fast-atom-bombardment mass spectrometry. Carbohydr. Res. 200:9-31.