메뉴 건너뛰기




Volumn 40, Issue 12, 2012, Pages 5201-5214

MicroRNA and transcription factor co-regulatory network analysis reveals miR-19 inhibits CYLD in T-cell acute lymphoblastic leukemia

Author keywords

[No Author keywords available]

Indexed keywords

IMMUNOGLOBULIN ENHANCER BINDING PROTEIN; MICRORNA; MICRORNA 17; MICRORNA 19; MICRORNA 20A; MICRORNA 92A1; RNA; TRANSCRIPTION FACTOR HOXA9; TRANSCRIPTION FACTOR RUNX1; UNCLASSIFIED DRUG;

EID: 84863227351     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gks175     Document Type: Article
Times cited : (118)

References (69)
  • 2
    • 77949369691 scopus 로고    scopus 로고
    • ABL1 rearrangements in T-cell acute lymphoblastic leukemia
    • Hagemeijer,A. and Graux,C. (2010) ABL1 rearrangements in T-cell acute lymphoblastic leukemia. Genes Chromosomes Cancer, 49, 299-308.
    • (2010) Genes Chromosomes Cancer , vol.49 , pp. 299-308
    • Hagemeijer, A.1    Graux, C.2
  • 5
    • 34547766674 scopus 로고    scopus 로고
    • Novel insights into the development of T-cell acute lymphoblastic leukemia
    • DOI 10.1007/s11899-007-0024-0
    • Staal,F.J., van Dongen,J.J. and Langerak,A.W. (2007) Novel insights into the development of T-cell acute lymphoblastic leukemia. Curr. Hematol. Malig. Rep., 2, 176-182. (Pubitemid 47235568)
    • (2007) Current Hematologic Malignancy Reports , vol.2 , Issue.3 , pp. 176-182
    • Staal, F.J.T.1    Van Dongen, J.J.M.2    Langerak, A.W.3
  • 6
    • 66149113692 scopus 로고    scopus 로고
    • Molecular genetics of acute lymphoblastic leukemia
    • Teitell,M.A. and Pandolfi,P.P. (2009) Molecular genetics of acute lymphoblastic leukemia. Annu. Rev. Pathol., 4, 175-198.
    • (2009) Annu. Rev. Pathol. , vol.4 , pp. 175-198
    • Teitell, M.A.1    Pandolfi, P.P.2
  • 7
    • 52749085175 scopus 로고    scopus 로고
    • Molecular-genetic insights in paediatric T-cell acute lymphoblastic leukaemia
    • Van Vlierberghe,P., Pieters,R., Beverloo,H.B. and Meijerink,J.P. (2008) Molecular-genetic insights in paediatric T-cell acute lymphoblastic leukaemia. Br. J. Haematol., 143, 153-168.
    • (2008) Br. J. Haematol. , vol.143 , pp. 153-168
    • Van Vlierberghe, P.1    Pieters, R.2    Beverloo, H.B.3    Meijerink, J.P.4
  • 8
    • 4644309196 scopus 로고    scopus 로고
    • The functions of animal microRNAs
    • Ambros,V. (2004) The functions of animal microRNAs. Nature, 431, 350-355.
    • (2004) Nature , vol.431 , pp. 350-355
    • Ambros, V.1
  • 9
    • 33750370444 scopus 로고    scopus 로고
    • MicroRNA signatures in human cancers
    • DOI 10.1038/nrc1997, PII NRC1997
    • Calin,G.A. and Croce,C.M. (2006) MicroRNA signatures in human cancers. Nat. Rev. Cancer, 6, 857-866. (Pubitemid 44629897)
    • (2006) Nature Reviews Cancer , vol.6 , Issue.11 , pp. 857-866
    • Calin, G.A.1    Croce, C.M.2
  • 13
  • 17
    • 59249099105 scopus 로고    scopus 로고
    • Activation of miR-17-92 by NK-like homeodomain proteins suppresses apoptosis via reduction of E2F1 in T-cell acute lymphoblastic leukemia
    • Nagel,S., Venturini,L., Przybylski,G.K., Grabarczyk,P., Schmidt,C.A., Meyer,C., Drexler,H.G., Macleod,R.A. and Scherr,M. (2009) Activation of miR-17-92 by NK-like homeodomain proteins suppresses apoptosis via reduction of E2F1 in T-cell acute lymphoblastic leukemia. Leuk Lymph., 50, 101-108.
    • (2009) Leuk Lymph. , vol.50 , pp. 101-108
    • Nagel, S.1    Venturini, L.2    Przybylski, G.K.3    Grabarczyk, P.4    Schmidt, C.A.5    Meyer, C.6    Drexler, H.G.7    Macleod, R.A.8    Scherr, M.9
  • 18
    • 79955756373 scopus 로고    scopus 로고
    • Repression of tumor suppressor miR-451 is essential for NOTCH1-induced oncogenesis in T-ALL
    • Li,X., Sanda,T., Look,A.T., Novina,C.D. and von Boehmer,H. (2011) Repression of tumor suppressor miR-451 is essential for NOTCH1-induced oncogenesis in T-ALL. J. Exp. Med., 208, 663-675.
    • (2011) J. Exp. Med. , vol.208 , pp. 663-675
    • Li, X.1    Sanda, T.2    Look, A.T.3    Novina, C.D.4    Von Boehmer, H.5
  • 19
    • 34249819336 scopus 로고    scopus 로고
    • MicroRNA-Mediated Feedback and Feedforward Loops Are Recurrent Network Motifs in Mammals
    • DOI 10.1016/j.molcel.2007.05.018, PII S109727650700319X
    • Tsang,J., Zhu,J. and van Oudenaarden,A. (2007) MicroRNA-mediated feedback and feedforward loops are recurrent network motifs in mammals. Mol. Cell, 26, 753-767. (Pubitemid 46856248)
    • (2007) Molecular Cell , vol.26 , Issue.5 , pp. 753-767
    • Tsang, J.1    Zhu, J.2    Van Oudenaarden, A.3
  • 20
    • 34547555796 scopus 로고    scopus 로고
    • Global and local architecture of the mammalian microRNA-transcription factor regulatory network
    • Shalgi,R., Lieber,D., Oren,M. and Pilpel,Y. (2007) Global and local architecture of the mammalian microRNA-transcription factor regulatory network. PLoS Comput. Biol., 3, e131.
    • (2007) PLoS Comput. Biol. , vol.3
    • Shalgi, R.1    Lieber, D.2    Oren, M.3    Pilpel, Y.4
  • 21
    • 70349334678 scopus 로고    scopus 로고
    • Genome-wide survey of microRNA-transcription factor feed-forward regulatory circuits in human
    • Re,A., Corá,D., Taverna,D. and Caselle,M. (2009) Genome-wide survey of microRNA-transcription factor feed-forward regulatory circuits in human. Mol. Biosyst., 5, 854-867.
    • (2009) Mol. Biosyst. , vol.5 , pp. 854-867
    • Re, A.1    Corá, D.2    Taverna, D.3    Caselle, M.4
  • 23
    • 49749086530 scopus 로고    scopus 로고
    • A cyclin D1/microRNA 17/20 regulatory feedback loop in control of breast cancer cell proliferation
    • Yu,Z., Wang,C., Wang,M., Li,Z., Casimiro,M.C., Liu,M., Wu,K., Whittle,J., Ju,X., Hyslop,T. et al. (2008) A cyclin D1/microRNA 17/20 regulatory feedback loop in control of breast cancer cell proliferation. J. Cell. Biol., 182, 509-517.
    • (2008) J. Cell. Biol. , vol.182 , pp. 509-517
    • Yu, Z.1    Wang, C.2    Wang, M.3    Li, Z.4    Casimiro, M.C.5    Liu, M.6    Wu, K.7    Whittle, J.8    Ju, X.9    Hyslop, T.10
  • 25
    • 77956520986 scopus 로고    scopus 로고
    • CircuitsDB: A database of mixed microRNA/transcription factor feed-forward regulatory circuits in human and mouse
    • Friard,O., Re,A., Taverna,D., De Bortoli,M. and Cora,D. (2010) CircuitsDB: a database of mixed microRNA/transcription factor feed-forward regulatory circuits in human and mouse. BMC Bioinform., 11, 435.
    • (2010) BMC Bioinform. , vol.11 , pp. 435
    • Friard, O.1    Re, A.2    Taverna, D.3    De Bortoli, M.4    Cora, D.5
  • 26
    • 75549092303 scopus 로고    scopus 로고
    • TransmiR: A transcription factor-microRNA regulation database
    • Wang,J., Lu,M., Qiu,C. and Cui,Q. (2010) TransmiR: a transcription factor-microRNA regulation database. Nucleic Acids Res., 38, D119-D12
    • (2010) Nucleic Acids Res. , vol.38
    • Wang, J.1    Lu, M.2    Qiu, C.3    Cui, Q.4
  • 27
    • 77949426688 scopus 로고    scopus 로고
    • A novel microRNA and transcription factor mediated regulatory network in schizophrenia
    • Guo,A.Y., Sun,J., Jia,P. and Zhao,Z. (2010) A novel microRNA and transcription factor mediated regulatory network in schizophrenia. BMC Syst. Biol., 4, 10.
    • (2010) BMC Syst. Biol. , vol.4 , pp. 10
    • Guo, A.Y.1    Sun, J.2    Jia, P.3    Zhao, Z.4
  • 29
    • 34347376692 scopus 로고    scopus 로고
    • Characterization of microRNA expression profiles in normal human tissues
    • Liang,Y., Ridzon,D., Wong,L. and Chen,C. (2007) Characterization of microRNA expression profiles in normal human tissues. BMC Genom., 8, 166.
    • (2007) BMC Genom. , vol.8 , pp. 166
    • Liang, Y.1    Ridzon, D.2    Wong, L.3    Chen, C.4
  • 31
    • 31044444975 scopus 로고    scopus 로고
    • TarBase: A comprehensive database of experimentally supported animal microRNA targets
    • DOI 10.1261/rna.2239606
    • Sethupathy,P., Corda,B. and Hatzigeorgiou,A.G. (2006) TarBase: a comprehensive database of experimentally supported animal microRNA targets. RNA, 12, 192-197. (Pubitemid 43121923)
    • (2006) RNA , vol.12 , Issue.2 , pp. 192-197
    • Sethupathy, P.1    Corda, B.2    Hatzigeorgiou, A.G.3
  • 33
    • 38549124383 scopus 로고    scopus 로고
    • The microRNA.org resource: Targets and expression
    • DOI 10.1093/nar/gkm995
    • Betel,D., Wilson,M., Gabow,A., Marks,D.S. and Sander,C. (2008) The microRNA.org resource: targets and expression. Nucleic Acids Res., 36, D149-D153. (Pubitemid 351149712)
    • (2008) Nucleic Acids Research , vol.36 , Issue.SUPPL. 1
    • Betel, D.1    Wilson, M.2    Gabow, A.3    Marks, D.S.4    Sander, C.5
  • 34
    • 11844278458 scopus 로고    scopus 로고
    • Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets
    • DOI 10.1016/j.cell.2004.12.035, PII S0092867404012607
    • Lewis,B.P., Burge,C.B. and Bartel,D.P. (2005) Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets. Cell, 120, 15-20. (Pubitemid 40094598)
    • (2005) Cell , vol.120 , Issue.1 , pp. 15-20
    • Lewis, B.P.1    Burge, C.B.2    Bartel, D.P.3
  • 37
    • 61449172037 scopus 로고    scopus 로고
    • Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
    • Huang da,W., Sherman,B.T. and Lempicki,R.A. (2009) Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat. Protoc., 4, 44-57.
    • (2009) Nat. Protoc. , vol.4 , pp. 44-57
    • Huang Da, W.1    Sherman, B.T.2    Lempicki, R.A.3
  • 38
    • 0035710746 scopus 로고    scopus 로고
    • -DeltaDeltaCT method
    • DOI 10.1006/meth.2001.1262
    • Livak,K.J. and Schmittgen,T.D. (2001) Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) method. Methods, 25, 402-408. (Pubitemid 34164012)
    • (2001) Methods , vol.25 , Issue.4 , pp. 402-408
    • Livak, K.J.1    Schmittgen, T.D.2
  • 40
    • 34250879111 scopus 로고    scopus 로고
    • Oncogenic potential of the miR-106-363 cluster and its implication in human T-cell leukemia
    • DOI 10.1158/0008-5472.CAN-06-4478
    • Landais,S., Landry,S., Legault,P. and Rassart,E. (2007) Oncogenic potential of the miR-106-363 cluster and its implication in human T-cell leukemia. Cancer Res., 67, 5699-5707. (Pubitemid 46985002)
    • (2007) Cancer Research , vol.67 , Issue.12 , pp. 5699-5707
    • Landais, S.1    Landry, S.2    Legault, P.3    Rassart, E.4
  • 42
    • 20444479428 scopus 로고    scopus 로고
    • c-Myc-regulated microRNAs modulate E2F1 expression
    • DOI 10.1038/nature03677
    • O'Donnell,K.A., Wentzel,E.A., Zeller,K.I., Dang,C.V. and Mendell,J.T. (2005) c-Myc-regulated microRNAs modulate E2F1 expression. Nature, 435, 839-843. (Pubitemid 40839736)
    • (2005) Nature , vol.435 , Issue.7043 , pp. 839-843
    • O'Donnell, K.A.1    Wentzel, E.A.2    Zeller, K.I.3    Dang, C.V.4    Mendell, J.T.5
  • 43
    • 77449150629 scopus 로고    scopus 로고
    • CYLD: A tumor suppressor deubiquitinase regulating NF-kappaB activation and diverse biological processes
    • Sun,S.C. (2010) CYLD: a tumor suppressor deubiquitinase regulating NF-kappaB activation and diverse biological processes. Cell Death Differ., 17, 25-34.
    • (2010) Cell Death Differ. , vol.17 , pp. 25-34
    • Sun, S.C.1
  • 44
    • 0035992911 scopus 로고    scopus 로고
    • Nuclear factor Kappa B regulation of proinflammatory cytokines in human gestational tissues in vitro
    • Lappas,M., Permezel,M., Georgiou,H.M. and Rice,G.E. (2002) Nuclear factor kappa B regulation of proinflammatory cytokines in human gestational tissues in vitro. Biol. Reprod., 67, 668-673. (Pubitemid 34803959)
    • (2002) Biology of Reproduction , vol.67 , Issue.2 , pp. 668-673
    • Lappas, M.1    Permezel, M.2    Georgiou, H.M.3    Rice, G.E.4
  • 46
    • 43549123531 scopus 로고    scopus 로고
    • The role of the PTEN/AKT pathway in NOTCH1-induced leukemia
    • Palomero,T., Dominguez,M. and Ferrando,A.A. (2008) The role of the PTEN/AKT Pathway in NOTCH1-induced leukemia. Cell Cycle, 7, 965-970. (Pubitemid 351679827)
    • (2008) Cell Cycle , vol.7 , Issue.8 , pp. 965-970
    • Palomero, T.1    Dominguez, M.2    Ferrando, A.A.3
  • 47
    • 34247476739 scopus 로고    scopus 로고
    • The Notch1/c-Myc pathway in T cell leukemia
    • Sharma,V.M., Draheim,K.M. and Kelliher,M.A. (2007) The Notch1/c-Myc pathway in T cell leukemia. Cell Cycle, 6, 927-930. (Pubitemid 46658747)
    • (2007) Cell Cycle , vol.6 , Issue.8 , pp. 927-930
    • Sharma, V.M.1    Draheim, K.M.2    Kelliher, M.A.3
  • 48
    • 40549104452 scopus 로고    scopus 로고
    • The calcineurin/NFAT signaling pathway: A novel therapeutic target in leukemia and solid tumors
    • Medyouf,H. and Ghysdael,J. (2008) The calcineurin/NFAT signaling pathway: a novel therapeutic target in leukemia and solid tumors. Cell Cycle, 7, 297-303. (Pubitemid 351366491)
    • (2008) Cell Cycle , vol.7 , Issue.3 , pp. 297-303
    • Medyouf, H.1    Ghysdael, J.2
  • 49
    • 40949152993 scopus 로고    scopus 로고
    • EL - A novel mechanism of chemoresistance in T-cell acute lymphoblastic leukemia
    • DOI 10.1093/carcin/bgm294
    • Leung,K.T., Li,K.K., Sun,S.S., Chan,P.K., Ooi,V.E. and Chiu,L.C. (2008) Activation of the JNK pathway promotes phosphorylation and degradation of BimEL - a novel mechanism of chemoresistance in T-cell acute lymphoblastic leukemia. Carcinogenesis, 29, 544-551. (Pubitemid 351404870)
    • (2008) Carcinogenesis , vol.29 , Issue.3 , pp. 544-551
    • Leung, K.T.1    Li, K.K.-H.2    Sun, S.S.-M.3    Chan, P.K.S.4    Ooi, V.E.-C.5    Chiu, L.C.-M.6
  • 50
    • 77951757309 scopus 로고    scopus 로고
    • The miR-17-92 microRNA polycistron regulates MLL leukemia stem cell potential by modulating p21 expression
    • Wong,P., Iwasaki,M., Somervaille,T.C., Ficara,F., Carico,C., Arnold,C., Chen,C.Z. and Cleary,M.L. (2010) The miR-17-92 microRNA polycistron regulates MLL leukemia stem cell potential by modulating p21 expression. Cancer Res., 70, 3833-3842.
    • (2010) Cancer Res. , vol.70 , pp. 3833-3842
    • Wong, P.1    Iwasaki, M.2    Somervaille, T.C.3    Ficara, F.4    Carico, C.5    Arnold, C.6    Chen, C.Z.7    Cleary, M.L.8
  • 56
    • 66149141021 scopus 로고    scopus 로고
    • PTEN and the PI3-kinase pathway in cancer
    • Chalhoub,N. and Baker,S.J. (2009) PTEN and the PI3-kinase pathway in cancer. Annu. Rev. Pathol., 4, 127-150.
    • (2009) Annu. Rev. Pathol. , vol.4 , pp. 127-150
    • Chalhoub, N.1    Baker, S.J.2
  • 57
    • 58149382112 scopus 로고    scopus 로고
    • Genetic modelling of the PTEN/AKT pathway in cancer research
    • Renner,O., Blanco-Aparicio,C. and Carnero,A. (2008) Genetic modelling of the PTEN/AKT pathway in cancer research. Clin. Transl. Oncol., 10, 618-627.
    • (2008) Clin. Transl. Oncol. , vol.10 , pp. 618-627
    • Renner, O.1    Blanco-Aparicio, C.2    Carnero, A.3
  • 61
    • 33644839920 scopus 로고    scopus 로고
    • Role of Bim and other Bcl-2 family members in autoimmune and degenerative diseases
    • Hughes,P., Bouillet,P. and Strasser,A. (2006) Role of Bim and other Bcl-2 family members in autoimmune and degenerative diseases. Curr. Dir. Autoimmun., 9, 74-94.
    • (2006) Curr. Dir. Autoimmun. , vol.9 , pp. 74-94
    • Hughes, P.1    Bouillet, P.2    Strasser, A.3
  • 62
    • 75149169481 scopus 로고    scopus 로고
    • Interleukin-7 regulates Bim proapoptotic activity in peripheral T-cell survival
    • Li,W.Q., Guszczynski,T., Hixon,J.A. and Durum,S.K. (2010) Interleukin-7 regulates Bim proapoptotic activity in peripheral T-cell survival. Mol. Cell. Biol., 30, 590-600.
    • (2010) Mol. Cell. Biol. , vol.30 , pp. 590-600
    • Li, W.Q.1    Guszczynski, T.2    Hixon, J.A.3    Durum, S.K.4
  • 63
    • 79951944939 scopus 로고    scopus 로고
    • BIM is a prognostic biomarker for early prednisolone response in pediatric acute lymphoblastic leukemia
    • Jiang,N., Koh,G.S., Lim,J.Y., Kham,S.K., Ariffin,H., Chew,F.T. and Yeoh,A.E. (2011) BIM is a prognostic biomarker for early prednisolone response in pediatric acute lymphoblastic leukemia. Exp. Hematol., 39, 321-329, 329 e1-e3.
    • (2011) Exp. Hematol. , vol.39
    • Jiang, N.1    Koh, G.S.2    Lim, J.Y.3    Kham, S.K.4    Ariffin, H.5    Chew, F.T.6    Yeoh, A.E.7
  • 64
    • 79951516547 scopus 로고    scopus 로고
    • Molecular pathogenesis and targeted therapies for NOTCH1-induced T-cell acute lymphoblastic leukemia
    • Paganin,M. and Ferrando,A. (2011) Molecular pathogenesis and targeted therapies for NOTCH1-induced T-cell acute lymphoblastic leukemia. Blood Rev., 25, 83-90.
    • (2011) Blood Rev. , vol.25 , pp. 83-90
    • Paganin, M.1    Ferrando, A.2
  • 65
    • 42449146639 scopus 로고    scopus 로고
    • Tumor suppressor CYLD: Negative regulation of NF-kappaB signaling and more
    • Courtois,G. (2008) Tumor suppressor CYLD: negative regulation of NF-kappaB signaling and more. Cell Mol. Life Sci., 65, 1123-1132.
    • (2008) Cell Mol. Life Sci. , vol.65 , pp. 1123-1132
    • Courtois, G.1
  • 66
    • 78650920066 scopus 로고    scopus 로고
    • Non-canonical NF-kappaB signaling pathway
    • Sun,S.C. (2011) Non-canonical NF-kappaB signaling pathway. Cell Res., 21, 71-85.
    • (2011) Cell Res. , vol.21 , pp. 71-85
    • Sun, S.C.1
  • 67
    • 79952165235 scopus 로고    scopus 로고
    • Glucocorticoid-mediated repression of the oncogenic microRNA cluster miR-17-92 contributes to the induction of Bim and initiation of apoptosis
    • Molitoris,J.K., McColl,K.S. and Distelhorst,C.W. (2011) Glucocorticoid-mediated repression of the oncogenic microRNA cluster miR-17-92 contributes to the induction of Bim and initiation of apoptosis. Mol. Endocrinol., 25, 409-420.
    • (2011) Mol. Endocrinol. , vol.25 , pp. 409-420
    • Molitoris, J.K.1    McColl, K.S.2    Distelhorst, C.W.3
  • 68
    • 41549098401 scopus 로고    scopus 로고
    • Antiproliferative effect of rapamycin on human T-cell leukemia cell line Jurkat by cell cycle arrest and telomerase inhibition
    • DOI 10.1111/j.1745-7254.2008.00767.x
    • Zhao,Y.M., Zhou,Q., Xu,Y., Lai,X.Y. and Huang,H. (2008) Antiproliferative effect of rapamycin on human T-cell leukemia cell line Jurkat by cell cycle arrest and telomerase inhibition. Acta Pharmacol. Sin., 29, 481-488. (Pubitemid 351465508)
    • (2008) Acta Pharmacologica Sinica , vol.29 , Issue.4 , pp. 481-488
    • Zhao, Y.-M.1    Zhou, Q.2    Xu, Y.3    Lai, X.-Y.4    Huang, H.5
  • 69
    • 23744494993 scopus 로고    scopus 로고
    • Rapamycin stimulates apoptosis of childhood acute lymphoblastic leukemia cells
    • DOI 10.1182/blood-2005-03-0929
    • Avellino,R., Romano,S., Parasole,R., Bisogni,R., Lamberti,A., Poggi,V., Venuta,S. and Romano,M.F. (2005) Rapamycin stimulates apoptosis of childhood acute lymphoblastic leukemia cells. Blood, 106, 1400-1406. (Pubitemid 41129607)
    • (2005) Blood , vol.106 , Issue.4 , pp. 1400-1406
    • Avellino, R.1    Romano, S.2    Parasole, R.3    Bisogni, R.4    Lamberti, A.5    Poggi, V.6    Venuta, S.7    Romano, M.F.8


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.