메뉴 건너뛰기




Volumn 64, Issue 3, 2012, Pages 381-392

Phycoerythrin evolution and diversification of spectral phenotype in marine Synechococcus and related picocyanobacteria

Author keywords

Adaptive evolution; Approximately unbiased test; Cyanobacteria; Horizontal gene transfer; Phycoerythrin; Phylogenetics

Indexed keywords

BACTERIAL DNA; DRUG DERIVATIVE; PHYCOBILIN; PHYCOERYTHRIN; PHYCOUROBILIN; RNA 16S; UROBILIN;

EID: 84863105834     PISSN: 10557903     EISSN: 10959513     Source Type: Journal    
DOI: 10.1016/j.ympev.2012.04.013     Document Type: Article
Times cited : (39)

References (75)
  • 1
    • 18744382506 scopus 로고    scopus 로고
    • ProtTest: selection of best-fit models of protein evolution
    • Abascal F., Zardoya R., Posada D. ProtTest: selection of best-fit models of protein evolution. Bioinformatics 2005, 21:2104-2105.
    • (2005) Bioinformatics , vol.21 , pp. 2104-2105
    • Abascal, F.1    Zardoya, R.2    Posada, D.3
  • 2
    • 33750969711 scopus 로고    scopus 로고
    • Culture isolation and culture-independent clone libraries reveal new marine Synechococcus ecotypes with distinctive light and N physiologies
    • Ahlgren N.A., Rocap G. Culture isolation and culture-independent clone libraries reveal new marine Synechococcus ecotypes with distinctive light and N physiologies. Appl. Environ. Microbiol. 2006, 72:7193-7204.
    • (2006) Appl. Environ. Microbiol. , vol.72 , pp. 7193-7204
    • Ahlgren, N.A.1    Rocap, G.2
  • 5
    • 0029975159 scopus 로고    scopus 로고
    • A genetic manipulation system for oceanic cyanobacteria of the genus Synechococcus
    • Brahamsha B. A genetic manipulation system for oceanic cyanobacteria of the genus Synechococcus. Appl. Environ. Microbiol. 1996, 62:1747-1751.
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 1747-1751
    • Brahamsha, B.1
  • 6
    • 4243133585 scopus 로고    scopus 로고
    • Phylogenetic diversity of Synechococcus in the Chesapeake Bay revealed by Ribulose-1,5-bisphosphate carboxylase-oxygenase (RuBisCO) large subunit gene (rbcL) sequences
    • Chen F., Wang K., Kan J., Bachoon D.S., Lu J., Lau S., Campbell L. Phylogenetic diversity of Synechococcus in the Chesapeake Bay revealed by Ribulose-1,5-bisphosphate carboxylase-oxygenase (RuBisCO) large subunit gene (rbcL) sequences. Aquat. Microb. Ecol. 2004, 36:153-164.
    • (2004) Aquat. Microb. Ecol. , vol.36 , pp. 153-164
    • Chen, F.1    Wang, K.2    Kan, J.3    Bachoon, D.S.4    Lu, J.5    Lau, S.6    Campbell, L.7
  • 7
    • 84860138574 scopus 로고    scopus 로고
    • Colored dissolved organic matter in the coastal ocean: an optical tool for coastal zone environmental assessment and management
    • Coble P., Hu C., Gould R.W., Chang G., Wood A.M. Colored dissolved organic matter in the coastal ocean: an optical tool for coastal zone environmental assessment and management. Oceanography 2004, 17:50-59.
    • (2004) Oceanography , vol.17 , pp. 50-59
    • Coble, P.1    Hu, C.2    Gould, R.W.3    Chang, G.4    Wood, A.M.5
  • 8
    • 0036407157 scopus 로고    scopus 로고
    • What are bacterial species?
    • Cohan F.M. What are bacterial species?. Annu. Rev. Microbiol. 2002, 56:457-487.
    • (2002) Annu. Rev. Microbiol. , vol.56 , pp. 457-487
    • Cohan, F.M.1
  • 9
    • 0037202384 scopus 로고    scopus 로고
    • An algorithm for detecting directional and non-directional positive selection in protein coding DNA sequences
    • Creevey C.J., McInerney J.O. An algorithm for detecting directional and non-directional positive selection in protein coding DNA sequences. Gene 2002, 300:43-51.
    • (2002) Gene , vol.300 , pp. 43-51
    • Creevey, C.J.1    McInerney, J.O.2
  • 10
    • 0141626870 scopus 로고    scopus 로고
    • CRANN: detecting adaptive evolution in protein-coding DNA sequences
    • Creevey C.J., McInerney J.O. CRANN: detecting adaptive evolution in protein-coding DNA sequences. Bioinformatics 2003, 19:1726.
    • (2003) Bioinformatics , vol.19 , pp. 1726
    • Creevey, C.J.1    McInerney, J.O.2
  • 11
    • 0141856627 scopus 로고    scopus 로고
    • Dispersal and phylogenetic diversity of nonmarine picocyanobacteria, inferred from 16S rRNA gene and cpcBA-intergenic spacer sequence analyses
    • Crosbie N.D., Pöckl M., Weisse T. Dispersal and phylogenetic diversity of nonmarine picocyanobacteria, inferred from 16S rRNA gene and cpcBA-intergenic spacer sequence analyses. Appl. Environ. Microbiol. 2003, 69:5716-5721.
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 5716-5721
    • Crosbie, N.D.1    Pöckl, M.2    Weisse, T.3
  • 12
    • 0026478536 scopus 로고
    • A one-step microbial DNA extraction method using " Chelex 100" suitable for gene amplification
    • de Lamballerie X., Zandotti C., Vignoli C., Bollet C., de Micco P. A one-step microbial DNA extraction method using " Chelex 100" suitable for gene amplification. Res. Microbiol. 1992, 143:785-790.
    • (1992) Res. Microbiol. , vol.143 , pp. 785-790
    • de Lamballerie, X.1    Zandotti, C.2    Vignoli, C.3    Bollet, C.4    de Micco, P.5
  • 14
    • 0037259888 scopus 로고    scopus 로고
    • Ecosystem-dependent adaptive radiations of picocyanobacteria inferred from 16S rRNA and ITS-1 sequence analysis
    • Ernst A., Becker S., Wollenzien U.I.A., Postius C. Ecosystem-dependent adaptive radiations of picocyanobacteria inferred from 16S rRNA and ITS-1 sequence analysis. Microbiology 2003, 149:217-228.
    • (2003) Microbiology , vol.149 , pp. 217-228
    • Ernst, A.1    Becker, S.2    Wollenzien, U.I.A.3    Postius, C.4
  • 16
    • 33845594673 scopus 로고    scopus 로고
    • Comparative molecular evolution of newly discovered picocyanobacterial strains reveals a phylogeneticaly informative variable region of β-phycoerythrin
    • Everroad R.C., Wood A.M. Comparative molecular evolution of newly discovered picocyanobacterial strains reveals a phylogeneticaly informative variable region of β-phycoerythrin. J. Phycol. 2006, 42:1300-1311.
    • (2006) J. Phycol. , vol.42 , pp. 1300-1311
    • Everroad, R.C.1    Wood, A.M.2
  • 17
    • 33646231049 scopus 로고    scopus 로고
    • Biochemical bases of type IV chromatic adaptation in marine Synechococcus spp
    • Everroad C., Six C., Partensky F., Thomas J.C., Holtzendorff J., Wood A.M. Biochemical bases of type IV chromatic adaptation in marine Synechococcus spp. J. Bact. 2006, 188:3345-3356.
    • (2006) J. Bact. , vol.188 , pp. 3345-3356
    • Everroad, C.1    Six, C.2    Partensky, F.3    Thomas, J.C.4    Holtzendorff, J.5    Wood, A.M.6
  • 19
    • 0037545904 scopus 로고    scopus 로고
    • Clade-specific 16S ribosomal DNA oligonucleotides reveal the predominance of a single marine Synechococcus clade throughout a stratified water column in the Red Sea
    • Fuller N.J., Marie D., Partensky F., Vaulot D., Post A.F., Scanlan D.J. Clade-specific 16S ribosomal DNA oligonucleotides reveal the predominance of a single marine Synechococcus clade throughout a stratified water column in the Red Sea. Appl. Environ. Microbiol. 2003, 69:2430-2443.
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 2430-2443
    • Fuller, N.J.1    Marie, D.2    Partensky, F.3    Vaulot, D.4    Post, A.F.5    Scanlan, D.J.6
  • 21
    • 0030807655 scopus 로고    scopus 로고
    • BIONJ: an improved version of the NJ algorithm based on a simple model of sequence data
    • Gascuel O. BIONJ: an improved version of the NJ algorithm based on a simple model of sequence data. Mol. Biol. Evol. 1997, 14:685-695.
    • (1997) Mol. Biol. Evol. , vol.14 , pp. 685-695
    • Gascuel, O.1
  • 22
    • 0024961673 scopus 로고
    • Light guides. Directional energy transfer in a photosynthetic antenna
    • Glazer A.N. Light guides. Directional energy transfer in a photosynthetic antenna. J. Biol. Chem. 1989, 264:1-4.
    • (1989) J. Biol. Chem. , vol.264 , pp. 1-4
    • Glazer, A.N.1
  • 23
    • 0000707968 scopus 로고
    • The effects of light quality and intensity on photosynthesis and growth of marine eukaryotic and prokaryotic phytoplankton clones
    • Glover H.E., Keller M.D., Spinrad R.W. The effects of light quality and intensity on photosynthesis and growth of marine eukaryotic and prokaryotic phytoplankton clones. J. Exp. Mar. Biol. Ecol. 1987, 105:137-159.
    • (1987) J. Exp. Mar. Biol. Ecol. , vol.105 , pp. 137-159
    • Glover, H.E.1    Keller, M.D.2    Spinrad, R.W.3
  • 24
  • 25
    • 73049174685 scopus 로고
    • Studies of marine planktonic diatoms. I. Cyclotella nana Hustedt and Detonula confervacea (Cleve) Gran
    • Guillard R.R.L., Ryther J.H. Studies of marine planktonic diatoms. I. Cyclotella nana Hustedt and Detonula confervacea (Cleve) Gran. Can. J. Microbiol. 1962, 8:229-239.
    • (1962) Can. J. Microbiol. , vol.8 , pp. 229-239
    • Guillard, R.R.L.1    Ryther, J.H.2
  • 26
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
    • Guindon S., Gascuel O. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst. Biol. 2003, 52:696-704.
    • (2003) Syst. Biol. , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 27
    • 77950806408 scopus 로고    scopus 로고
    • New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0
    • Guindon S., Dufayard J.F., Lefort V., Anisimova M., Hordijk W., Gascuel O. New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Syst. Biol. 2010, 59:307-321.
    • (2010) Syst. Biol. , vol.59 , pp. 307-321
    • Guindon, S.1    Dufayard, J.F.2    Lefort, V.3    Anisimova, M.4    Hordijk, W.5    Gascuel, O.6
  • 28
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: a user-friendly biological sequence alignment editor and analysis program for windows 95/98/NT
    • Hall T.A. BioEdit: a user-friendly biological sequence alignment editor and analysis program for windows 95/98/NT. Nucleic Acids Symp. Ser. 1999, 41:95-98.
    • (1999) Nucleic Acids Symp. Ser. , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 29
    • 38149101581 scopus 로고    scopus 로고
    • Diversity and phylogeny of Baltic Sea picocyanobacteria inferred from their ITS and phycobiliprotein operons
    • Haverkamp T., Acinas S.G., Doeleman M., Stomp M., Huisman J., Stal L.J. Diversity and phylogeny of Baltic Sea picocyanobacteria inferred from their ITS and phycobiliprotein operons. Environ. Microbiol. 2008, 10:174-188.
    • (2008) Environ. Microbiol. , vol.10 , pp. 174-188
    • Haverkamp, T.1    Acinas, S.G.2    Doeleman, M.3    Stomp, M.4    Huisman, J.5    Stal, L.J.6
  • 30
    • 63349098310 scopus 로고    scopus 로고
    • Colorful microdiversity of Synechococcus strains (picocyanobacteria) isolated from the Baltic Sea
    • Haverkamp T.H.A., Schouten D., Doeleman M., Wollenzien U., Huisman J., Stal L.J. Colorful microdiversity of Synechococcus strains (picocyanobacteria) isolated from the Baltic Sea. ISME J. 2009, 3:397-408.
    • (2009) ISME J. , vol.3 , pp. 397-408
    • Haverkamp, T.H.A.1    Schouten, D.2    Doeleman, M.3    Wollenzien, U.4    Huisman, J.5    Stal, L.J.6
  • 31
    • 0008703836 scopus 로고    scopus 로고
    • Form-genus XIII. Synechococcus
    • Boone, D.R., Castenholz, R.W. (Eds.), Bergey's Manual of Systematic Bacteriology, second ed., Springer-Verlag, New York
    • Herdman, M., Castenholz, R.W., Waterbury, J.B., Rippka, R., 2001. Form-genus XIII. Synechococcus. In: Boone, D.R., Castenholz, R.W. (Eds.), Bergey's Manual of Systematic Bacteriology, second ed., vol. 1. Springer-Verlag, New York, pp. 508-512.
    • (2001) , vol.1 , pp. 508-512
    • Herdman, M.1    Castenholz, R.W.2    Waterbury, J.B.3    Rippka, R.4
  • 32
    • 0024234855 scopus 로고
    • CLUSTAL: a package for performing multiple sequence alignment on a microcomputer
    • Higgins D.G., Sharp P.M. CLUSTAL: a package for performing multiple sequence alignment on a microcomputer. Gene 1988, 73:237-244.
    • (1988) Gene , vol.73 , pp. 237-244
    • Higgins, D.G.1    Sharp, P.M.2
  • 33
    • 0024598146 scopus 로고
    • Fast and sensitive multiple sequence alignments on a microcomputer
    • Higgins D.G., Sharp P.M. Fast and sensitive multiple sequence alignments on a microcomputer. Bioinformatics 1989, 5:151-153.
    • (1989) Bioinformatics , vol.5 , pp. 151-153
    • Higgins, D.G.1    Sharp, P.M.2
  • 34
    • 0034849408 scopus 로고    scopus 로고
    • MRBAYES: Bayesian inference of phylogenetic trees
    • Huelsenbeck J.P., Ronquist F. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 2001, 17:754-755.
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 35
    • 78650005387 scopus 로고    scopus 로고
    • A novel phylogenetic clade of picocyanobacteria from the Mazurian lakes (Poland) reflects the early ontogeny of glacial lakes
    • Jasser I., Królicka A., Karnkowska-Ishikawa A. A novel phylogenetic clade of picocyanobacteria from the Mazurian lakes (Poland) reflects the early ontogeny of glacial lakes. FEMS Microbiol. Ecol. 2011, 75:89-98.
    • (2011) FEMS Microbiol. Ecol. , vol.75 , pp. 89-98
    • Jasser, I.1    Królicka, A.2    Karnkowska-Ishikawa, A.3
  • 36
    • 33645095466 scopus 로고    scopus 로고
    • Growth rates of Synechococcus types with different phycoerythrin composition estimated by dual-laser flow cytometry in relationship to the light environment in the Uwa Sea
    • Katano T., Nakano S.I. Growth rates of Synechococcus types with different phycoerythrin composition estimated by dual-laser flow cytometry in relationship to the light environment in the Uwa Sea. J. Sea Res. 2006, 55:182-190.
    • (2006) J. Sea Res. , vol.55 , pp. 182-190
    • Katano, T.1    Nakano, S.I.2
  • 37
    • 0028163796 scopus 로고
    • Primary production of prochlorophytes, cyanobacteria, and eucaryotic ultraphytoplankton: measurements from flow cytometric sorting
    • Li W.K.W. Primary production of prochlorophytes, cyanobacteria, and eucaryotic ultraphytoplankton: measurements from flow cytometric sorting. Limnol. Oceanogr. 1994, 39:169-175.
    • (1994) Limnol. Oceanogr. , vol.39 , pp. 169-175
    • Li, W.K.W.1
  • 38
    • 0001525525 scopus 로고
    • Vertical distribution of North Atlantic ultraphytoplankton: analysis by flow cytometry and epifluorescence microscopy
    • Li W.K.W., Wood A.M. Vertical distribution of North Atlantic ultraphytoplankton: analysis by flow cytometry and epifluorescence microscopy. Deep-Sea Res. A 1988, 35:1615-1638.
    • (1988) Deep-Sea Res. A , vol.35 , pp. 1615-1638
    • Li, W.K.W.1    Wood, A.M.2
  • 39
    • 0032464280 scopus 로고    scopus 로고
    • Cyanobacterial phycobilisomes
    • MacColl R. Cyanobacterial phycobilisomes. J. Struct. Biol. 1998, 24:311-334.
    • (1998) J. Struct. Biol. , vol.24 , pp. 311-334
    • MacColl, R.1
  • 41
    • 0033775190 scopus 로고    scopus 로고
    • Evolution of thermotolerance in hot spring cyanobacteria of the genus Synechococcus
    • Miller S.R., Castenholz R.W. Evolution of thermotolerance in hot spring cyanobacteria of the genus Synechococcus. Appl. Environ. Microbiol. 2000, 66:4222-4229.
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 4222-4229
    • Miller, S.R.1    Castenholz, R.W.2
  • 42
    • 0022507362 scopus 로고
    • Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions
    • Nei M., Gojobori T. Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Mol. Biol. Evol. 1986, 3:418-426.
    • (1986) Mol. Biol. Evol. , vol.3 , pp. 418-426
    • Nei, M.1    Gojobori, T.2
  • 43
    • 0028369221 scopus 로고
    • Organization and transcription of the class I phycoerythrin genes of the marine cyanobacterium Synechococcus sp. WH7803
    • Newman J., Mann N.H., Carr N.G. Organization and transcription of the class I phycoerythrin genes of the marine cyanobacterium Synechococcus sp. WH7803. Plant Mol. Biol. 1994, 24:679-683.
    • (1994) Plant Mol. Biol. , vol.24 , pp. 679-683
    • Newman, J.1    Mann, N.H.2    Carr, N.G.3
  • 45
    • 33646028334 scopus 로고
    • Analysis of Synechococcus pigment types in the sea using single and dual beam flow cytometry
    • Olson R.J., Chisholm S.W., Zettler E.R., Armbrust E.V. Analysis of Synechococcus pigment types in the sea using single and dual beam flow cytometry. Deep-Sea Res. A 1988, 35:425-440.
    • (1988) Deep-Sea Res. A , vol.35 , pp. 425-440
    • Olson, R.J.1    Chisholm, S.W.2    Zettler, E.R.3    Armbrust, E.V.4
  • 46
    • 0025638233 scopus 로고
    • Pigment, size and distribution of Synechococcus in the North Atlantic and Pacific oceans
    • Olson R.J., Chisholm S.W., Zettler E.R., Armbrust E.V. Pigment, size and distribution of Synechococcus in the North Atlantic and Pacific oceans. Limnol. Oceanogr. 1990, 35:45-58.
    • (1990) Limnol. Oceanogr. , vol.35 , pp. 45-58
    • Olson, R.J.1    Chisholm, S.W.2    Zettler, E.R.3    Armbrust, E.V.4
  • 47
    • 0025895747 scopus 로고
    • Phycoerythrins of marine unicellular cyanobacteria. I. Bilin types and locations and energy transfer pathways in Synechococcus spp. phycoerythrins
    • Ong L.J., Glazer A.N. Phycoerythrins of marine unicellular cyanobacteria. I. Bilin types and locations and energy transfer pathways in Synechococcus spp. phycoerythrins. J. Biol. Chem. 1991, 266:9515-9527.
    • (1991) J. Biol. Chem. , vol.266 , pp. 9515-9527
    • Ong, L.J.1    Glazer, A.N.2
  • 48
    • 0030203863 scopus 로고    scopus 로고
    • TREEVIEW: an application to display phylogenetic trees on personal computers
    • Page R.D.M. TREEVIEW: an application to display phylogenetic trees on personal computers. Comput. Appl. Biosci. 1996, 12:357-358.
    • (1996) Comput. Appl. Biosci. , vol.12 , pp. 357-358
    • Page, R.D.M.1
  • 49
    • 0035140734 scopus 로고    scopus 로고
    • Chromatic adaptation in marine Synechococcus strains
    • Palenik B. Chromatic adaptation in marine Synechococcus strains. Appl. Environ. Microbiol. 2001, 67:991-994.
    • (2001) Appl. Environ. Microbiol. , vol.67 , pp. 991-994
    • Palenik, B.1
  • 50
    • 0000449745 scopus 로고    scopus 로고
    • Differential distribution and ecology of Prochlorococcus and Synechococcus in oceanic waters: a review
    • Partensky F., Blanchot J., Vaulot D. Differential distribution and ecology of Prochlorococcus and Synechococcus in oceanic waters: a review. Bull. Inst. Oceanogr. 1999, 19:457-475.
    • (1999) Bull. Inst. Oceanogr. , vol.19 , pp. 457-475
    • Partensky, F.1    Blanchot, J.2    Vaulot, D.3
  • 51
    • 45849154165 scopus 로고    scopus 로고
    • JModelTest: phylogenetic model averaging
    • Posada D. JModelTest: phylogenetic model averaging. Mol. Biol. Evol. 2008, 25:1253-1256.
    • (2008) Mol. Biol. Evol. , vol.25 , pp. 1253-1256
    • Posada, D.1
  • 52
    • 84863086898 scopus 로고    scopus 로고
    • Form-genus IV. Cyanobium
    • Boone, D.R., Castenholz, R.W. (Eds.), Bergey's Manual of Systematic Bacteriology, second ed., Springer-Verlag, New York
    • Rippka, R., Castenholz, R.W., Herdman, M., 2001. Form-genus IV. Cyanobium. In: Boone, D.R., Castenholz, R.W. (Eds.), Bergey's Manual of Systematic Bacteriology, second ed., vol. 1. Springer-Verlag, New York, pp. 498-499.
    • (2001) , vol.1 , pp. 498-499
    • Rippka, R.1    Castenholz, R.W.2    Herdman, M.3
  • 53
    • 0034984791 scopus 로고    scopus 로고
    • Phylogenetic analyses of Synechococcus strains (cyanobacteria) using sequences of 16S rDNA and part of the phycocyanin operon reveal multiple evolutionary lines and reflect phycobilin content
    • Robertson B.R., Tezuka N., Watanabe M.M. Phylogenetic analyses of Synechococcus strains (cyanobacteria) using sequences of 16S rDNA and part of the phycocyanin operon reveal multiple evolutionary lines and reflect phycobilin content. Int. J. Syst. Evol. Microbiol. 2001, 51:861-871.
    • (2001) Int. J. Syst. Evol. Microbiol. , vol.51 , pp. 861-871
    • Robertson, B.R.1    Tezuka, N.2    Watanabe, M.M.3
  • 54
    • 0036200876 scopus 로고    scopus 로고
    • Resolution of Prochlorococcus and Synechococcus ecotypes by using 16S-23S ribosomal DNA internal transcribed spacer sequences
    • Rocap G., Distel D.L., Waterbury J.B., Chisholm S.W. Resolution of Prochlorococcus and Synechococcus ecotypes by using 16S-23S ribosomal DNA internal transcribed spacer sequences. Appl. Environ. Microbiol. 2002, 68:1180-1191.
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 1180-1191
    • Rocap, G.1    Distel, D.L.2    Waterbury, J.B.3    Chisholm, S.W.4
  • 56
    • 0036623258 scopus 로고    scopus 로고
    • An approximately unbiased test of phylogenetic tree selection
    • Shimodaira H. An approximately unbiased test of phylogenetic tree selection. Syst. Biol. 2002, 51:492-508.
    • (2002) Syst. Biol. , vol.51 , pp. 492-508
    • Shimodaira, H.1
  • 57
    • 0036139287 scopus 로고    scopus 로고
    • CONSEL: for assessing the confidence of phylogenetic tree selection
    • Shimodaira H., Hasegawa M. CONSEL: for assessing the confidence of phylogenetic tree selection. Bioinformatics 2001, 17:1246-1247.
    • (2001) Bioinformatics , vol.17 , pp. 1246-1247
    • Shimodaira, H.1    Hasegawa, M.2
  • 62
    • 0031574072 scopus 로고    scopus 로고
    • The clustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson J.D., Gibson T.J., Plewniak F., Jeanmougin F., Higgins D.G. The clustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 1997, 24:4876-4882.
    • (1997) Nucleic Acids Res. , vol.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 63
    • 0035163637 scopus 로고    scopus 로고
    • Phycobiliprotein genes of the marine photosynthetic prokaryote Prochlorococcus: evidence for rapid evolution of genetic heterogeneity
    • Ting C.S., Rocap G., King J., Chisholm S.W. Phycobiliprotein genes of the marine photosynthetic prokaryote Prochlorococcus: evidence for rapid evolution of genetic heterogeneity. Microbiology 2001, 211:3171-3182.
    • (2001) Microbiology , vol.211 , pp. 3171-3182
    • Ting, C.S.1    Rocap, G.2    King, J.3    Chisholm, S.W.4
  • 64
    • 0032710402 scopus 로고    scopus 로고
    • Swimming marine Synechococcus strains with widely different photosynthetic pigment ratios form a monophyletic group
    • Toledo G., Palenik B., Brahamsha B. Swimming marine Synechococcus strains with widely different photosynthetic pigment ratios form a monophyletic group. Appl. Environ. Microbiol. 1999, 65:5247-5251.
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 5247-5251
    • Toledo, G.1    Palenik, B.2    Brahamsha, B.3
  • 65
    • 0031889272 scopus 로고    scopus 로고
    • Rapid diversification of marine picophytoplankton with dissimilar light-harvesting structures inferred from sequences of Prochlorococcus and Synechococcus (Cyanobacteria)
    • Urbach E., Scanlan D.J., Distel D.L., Waterbury J.B., Chisholm S.W. Rapid diversification of marine picophytoplankton with dissimilar light-harvesting structures inferred from sequences of Prochlorococcus and Synechococcus (Cyanobacteria). J. Mol. Evol. 1998, 46:188-201.
    • (1998) J. Mol. Evol. , vol.46 , pp. 188-201
    • Urbach, E.1    Scanlan, D.J.2    Distel, D.L.3    Waterbury, J.B.4    Chisholm, S.W.5
  • 66
    • 0002523795 scopus 로고
    • Biological and ecological characterization of the marine unicellular cyanobacterium Synechococcus
    • Waterbury J.B., Watson S.W., Valois F.W., Franks D.G. Biological and ecological characterization of the marine unicellular cyanobacterium Synechococcus. Can. Bull. Fish Aquat. Sci. 1986, 214:71-120.
    • (1986) Can. Bull. Fish Aquat. Sci. , vol.214 , pp. 71-120
    • Waterbury, J.B.1    Watson, S.W.2    Valois, F.W.3    Franks, D.G.4
  • 67
    • 33747160474 scopus 로고    scopus 로고
    • Population genomics in natural microbial communities
    • Whitaker R.J., Banfield J.F. Population genomics in natural microbial communities. Trend. Ecol. Evol. 2006, 21:508-516.
    • (2006) Trend. Ecol. Evol. , vol.21 , pp. 508-516
    • Whitaker, R.J.1    Banfield, J.F.2
  • 68
    • 0025744867 scopus 로고
    • Phycoerythrins of marine unicellular cyanobacteria. III. Sequence of a class II phycoerythrin
    • Wilbanks S.M., de Lorimer R., Glazer A.N. Phycoerythrins of marine unicellular cyanobacteria. III. Sequence of a class II phycoerythrin. J. Biol. Chem. 1991, 266:9535-9539.
    • (1991) J. Biol. Chem. , vol.266 , pp. 9535-9539
    • Wilbanks, S.M.1    de Lorimer, R.2    Glazer, A.N.3
  • 69
    • 0036206049 scopus 로고    scopus 로고
    • Cyanophycin production in a phycoerythrin-containing marine Synechococcus strain of unusual phylogenetic affinity
    • Wingard L.L., Miller S.R., Sellker J.M.L., Stenn E., Allen M.M., Wood A.M. Cyanophycin production in a phycoerythrin-containing marine Synechococcus strain of unusual phylogenetic affinity. Appl. Environ. Microbiol. 2002, 68:1772-1777.
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 1772-1777
    • Wingard, L.L.1    Miller, S.R.2    Sellker, J.M.L.3    Stenn, E.4    Allen, M.M.5    Wood, A.M.6
  • 70
    • 0001228774 scopus 로고
    • Adaptation of photosynthetic apparatus of marine ultraphytoplankton to natural light fields
    • Wood A.M. Adaptation of photosynthetic apparatus of marine ultraphytoplankton to natural light fields. Nature 1985, 316:253-255.
    • (1985) Nature , vol.316 , pp. 253-255
    • Wood, A.M.1
  • 71
    • 84986841323 scopus 로고
    • DNA Polymorphism within the WH7803 serogroup of marine Synechococcus spp
    • Wood A.M., Townsend D. DNA Polymorphism within the WH7803 serogroup of marine Synechococcus spp. J. Phycol. 1990, 26:576-585.
    • (1990) J. Phycol. , vol.26 , pp. 576-585
    • Wood, A.M.1    Townsend, D.2
  • 72
    • 2642630756 scopus 로고    scopus 로고
    • Water column transparency and the distribution of spectrally distinct forms of phycoerythrin-containing organisms
    • Wood A.M., Phinney D.A., Yentsch C.S. Water column transparency and the distribution of spectrally distinct forms of phycoerythrin-containing organisms. Mar. Ecol. Prog. Ser. 1998, 162:25-31.
    • (1998) Mar. Ecol. Prog. Ser. , vol.162 , pp. 25-31
    • Wood, A.M.1    Phinney, D.A.2    Yentsch, C.S.3
  • 73
    • 26844547035 scopus 로고    scopus 로고
    • Measuring growth rates in microalgal cultures
    • Elsevier Academic Press, Burlington, MA, R.A. Anderson (Ed.)
    • Wood A.M., Everroad R.C., Wingard L.M. Measuring growth rates in microalgal cultures. Algal Culturing Techniques 2005, 269-285. Elsevier Academic Press, Burlington, MA. R.A. Anderson (Ed.).
    • (2005) Algal Culturing Techniques , pp. 269-285
    • Wood, A.M.1    Everroad, R.C.2    Wingard, L.M.3
  • 74
    • 33748979723 scopus 로고    scopus 로고
    • Evolutionary analysis of phycobiliproteins: implications for their structural and functional relationships
    • Zhao F., Qin S. Evolutionary analysis of phycobiliproteins: implications for their structural and functional relationships. J. Mol. Evol. 2006, 63:330-340.
    • (2006) J. Mol. Evol. , vol.63 , pp. 330-340
    • Zhao, F.1    Qin, S.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.