-
1
-
-
1842411320
-
Crystal structure of the nucleosome core particle at 2.8 A resolution
-
PMID:9305837
-
Luger K, Mäder AW, Richmond RK, Sargent DF, Richmond TJ. Crystal structure of the nucleosome core particle at 2.8 A resolution. Nature 1997; 389:251-260. PMID:9305837; http://dx.doi.org/10.1038/38444.
-
(1997)
Nature
, vol.389
, pp. 251-260
-
-
Luger, K.1
Mäder, A.W.2
Richmond, R.K.3
Sargent, D.F.4
Richmond, T.J.5
-
2
-
-
0028236523
-
Transcription: In tune with the histones
-
PMID:8156588
-
Wolffe AP. Transcription: in tune with the histones. Cell 1994; 77:13-16. PMID:8156588; http://dx.doi.org/10.1016/0092-8674(94)90229-1.
-
(1994)
Cell
, vol.77
, pp. 13-16
-
-
Wolffe, A.P.1
-
3
-
-
0035839136
-
Translating the histone code
-
PMID:11498575
-
Jenuwein T, Allis CD. Translating the histone code. Science 2001; 293:1074-1080. PMID:11498575; http://dx.doi.org/10.1126/science.1063127.
-
(2001)
Science
, vol.293
, pp. 1074-1080
-
-
Jenuwein, T.1
Allis, C.D.2
-
4
-
-
23944462969
-
Genome-wide map of nucleosome acetylation and methylation in yeast
-
PMID:16122420
-
Pokholok DK, Harbison CT, Levine S, Cole M, Hannett NM, Lee TI, et al. Genome-wide map of nucleosome acetylation and methylation in yeast. Cell 2005; 122:517-527. PMID:16122420; http://dx.doi.org/10.1016/j.cell.2005.06.026.
-
(2005)
Cell
, vol.122
, pp. 517-527
-
-
Pokholok, D.K.1
Harbison, C.T.2
Levine, S.3
Cole, M.4
Hannett, N.M.5
Lee, T.I.6
-
5
-
-
0036850325
-
Cellular memory and the histone code
-
PMID:12419240
-
Turner BM. Cellular memory and the histone code. Cell 2002; 111:285-291. PMID:12419240; http://dx.doi.org/10.1016/S0092-8674(02)01080-2.
-
(2002)
Cell
, vol.111
, pp. 285-291
-
-
Turner, B.M.1
-
6
-
-
0042090770
-
Cooperative interactions between epigenetic modifications and their function in the regulation of chromosome architecture
-
PMID:12879449
-
Weissmann F, Lyko F. Cooperative interactions between epigenetic modifications and their function in the regulation of chromosome architecture. Bioessays 2003; 25:792-797. PMID:12879449; http://dx.doi.org/10.1002/bies.10314.
-
(2003)
Bioessays
, vol.25
, pp. 792-797
-
-
Weissmann, F.1
Lyko, F.2
-
7
-
-
27644589675
-
The diverse functions of histone lysine methylation
-
PMID:16261189
-
Martin C, Zhang Y. The diverse functions of histone lysine methylation. Nat Rev Mol Cell Biol 2005; 6:838-849. PMID:16261189; http://dx.doi.org/10.1038/nrm1761.
-
(2005)
Nat Rev Mol Cell Biol
, vol.6
, pp. 838-849
-
-
Martin, C.1
Zhang, Y.2
-
8
-
-
34249299791
-
The complex language of chromatin regulation during transcription
-
PMID:17522673
-
Berger SL. The complex language of chromatin regulation during transcription. Nature 2007; 447:407-412. PMID:17522673; http://dx.doi.org/10.1038/nature05915.
-
(2007)
Nature
, vol.447
, pp. 407-412
-
-
Berger, S.L.1
-
9
-
-
34249026300
-
High-resolution profiling of histone methylations in the human genome
-
PMID:17512414
-
Barski A, Cuddapah S, Cui K, Roh TY, Schones DE, Wang Z, et al. High-resolution profiling of histone methylations in the human genome. Cell 2007; 129:823-837. PMID:17512414; http://dx.doi.org/10.1016/j.cell.2007.05.009.
-
(2007)
Cell
, vol.129
, pp. 823-837
-
-
Barski, A.1
Cuddapah, S.2
Cui, K.3
Roh, T.Y.4
Schones, D.E.5
Wang, Z.6
-
10
-
-
33847070442
-
The role of chromatin during transcription
-
PMID:17320508
-
Li B, Carey M, Workman JL. The role of chromatin during transcription. Cell 2007; 128:707-719. PMID:17320508; http://dx.doi.org/10.1016/j.cell.2007.01.015.
-
(2007)
Cell
, vol.128
, pp. 707-719
-
-
Li, B.1
Carey, M.2
Workman, J.L.3
-
11
-
-
39749145198
-
Dynamic regulation of nucleosome positioning in the human genome
-
PMID:18329373
-
Schones DE, Cui K, Cuddapah S, Roh TY, Barski A, Wang Z, et al. Dynamic regulation of nucleosome positioning in the human genome. Cell 2008; 132:887-898. PMID:18329373; http://dx.doi.org/10.1016/j.cell.2008.02.022.
-
(2008)
Cell
, vol.132
, pp. 887-898
-
-
Schones, D.E.1
Cui, K.2
Cuddapah, S.3
Roh, T.Y.4
Barski, A.5
Wang, Z.6
-
12
-
-
68749108259
-
LSD1 is a subunit of the NuRD complex and targets the metastasis programs in breast cancer
-
PMID:19703393
-
Wang Y, Zhang H, Chen Y, Sun Y, Yang F, Yu W, et al. LSD1 is a subunit of the NuRD complex and targets the metastasis programs in breast cancer. Cell 2009; 138:660-672. PMID:19703393; http://dx.doi.org/10.1016/j.cell.2009.05.050.
-
(2009)
Cell
, vol.138
, pp. 660-672
-
-
Wang, Y.1
Zhang, H.2
Chen, Y.3
Sun, Y.4
Yang, F.5
Yu, W.6
-
13
-
-
77957333749
-
Histone modification therapy of cancer
-
PMID:20920755
-
Biancotto C, Frigè G, Minucci S. Histone modification therapy of cancer. Adv Genet 2010; 70:341-86. PMID:20920755; http://dx.doi.org/10.1016/B978-0-12-380866-0.60013-7.
-
(2010)
Adv Genet
, vol.70
, pp. 341-386
-
-
Biancotto, C.1
Frigè, G.2
Minucci, S.3
-
14
-
-
78651246115
-
Chromatin landscape: Methylation beyond transcription
-
Black JC, Whetstine JR. Chromatin landscape: Methylation beyond transcription. Epigenetics 6.
-
Epigenetics
, pp. 6
-
-
Black, J.C.1
Whetstine, J.R.2
-
15
-
-
67649305191
-
Epigenetics in cancer: Targeting chromatin modifications
-
PMID:19509247
-
Ellis L, Atadja PW, Johnstone RW. Epigenetics in cancer: targeting chromatin modifications. Mol Cancer Ther 2009; 8:1409-1420. PMID:19509247; http://dx.doi.org/10.1158/1535-7163.MCT-08-0860.
-
(2009)
Mol Cancer Ther
, vol.8
, pp. 1409-1420
-
-
Ellis, L.1
Atadja, P.W.2
Johnstone, R.W.3
-
16
-
-
52049126730
-
Heparanase is overexpressed in lung cancer and correlates inversely with patient survival
-
PMID:18618498
-
Cohen E, Doweck I, Naroditsky I, Ben-Izhak O, Kremer R, Best LA, et al. Heparanase is overexpressed in lung cancer and correlates inversely with patient survival. Cancer 2008; 113:1004-1011. PMID:18618498; http://dx.doi.org/10.1002/cncr.23680.
-
(2008)
Cancer
, vol.113
, pp. 1004-1011
-
-
Cohen, E.1
Doweck, I.2
Naroditsky, I.3
Ben-Izhak, O.4
Kremer, R.5
Best, L.A.6
-
17
-
-
0035091164
-
Heparanase: A key enzyme involved in cell invasion
-
PMID:11250066
-
Parish CR, Freeman C, Hulett MD. Heparanase: a key enzyme involved in cell invasion. Biochim Biophys Acta 2001; 1471:99-108. PMID:11250066.
-
(2001)
Biochim Biophys Acta
, vol.1471
, pp. 99-108
-
-
Parish, C.R.1
Freeman, C.2
Hulett, M.D.3
-
18
-
-
0034904048
-
Molecular properties and involvement of heparanase in cancer metastasis and angiogenesis
-
PMID:11489924
-
Vlodavsky I, Friedmann Y. Molecular properties and involvement of heparanase in cancer metastasis and angiogenesis. J Clin Invest 2001; 108:341-347. PMID:11489924.
-
(2001)
J Clin Invest
, vol.108
, pp. 341-347
-
-
Vlodavsky, I.1
Friedmann, Y.2
-
19
-
-
33748048179
-
The role of heparan sulphate in inflammation
-
PMID:16917509
-
Parish CR. The role of heparan sulphate in inflammation. Nat Rev Immunol 2006; 6:633-643. PMID:16917509; http://dx.doi.org/10.1038/nri1918.
-
(2006)
Nat Rev Immunol
, vol.6
, pp. 633-643
-
-
Parish, C.R.1
-
20
-
-
4344598247
-
Heparanase gene silencing, tumor invasiveness, angiogenesis and metastasis
-
PMID:15316057
-
Edovitsky E, Elkin M, Zcharia E, Peretz T, Vlodavsky I. Heparanase gene silencing, tumor invasiveness, angiogenesis and metastasis. J Natl Cancer Inst 2004; 96:1219-1230. PMID:15316057; http://dx.doi.org/10.1093/jnci/djh230.
-
(2004)
J Natl Cancer Inst
, vol.96
, pp. 1219-1230
-
-
Edovitsky, E.1
Elkin, M.2
Zcharia, E.3
Peretz, T.4
Vlodavsky, I.5
-
21
-
-
34547886915
-
Heparanase induces Akt phosphorylation via a lipid raft receptor
-
PMID:17689495
-
Ben-Zaken O, Gingis-Velitski S, Vlodavsky I, Ilan N. Heparanase induces Akt phosphorylation via a lipid raft receptor. Biochem Biophys Res Commun 2007; 361:829-834. PMID:17689495; http://dx.doi.org/10.1016/j.bbrc.2007.06.188.
-
(2007)
Biochem Biophys Res Commun
, vol.361
, pp. 829-834
-
-
Ben-Zaken, O.1
Gingis-Velitski, S.2
Vlodavsky, I.3
Ilan, N.4
-
22
-
-
62449097111
-
Structure-function approach identifies a COOH-terminal domain that mediates heparanase signaling
-
PMID:19244131
-
Fux L, Feibish N, Cohen-Kaplan V, Gingis-Velitski S, Feld S, Geffen C, et al. Structure-function approach identifies a COOH-terminal domain that mediates heparanase signaling. Cancer Res 2009; 69:1758-1767. PMID:19244131; http://dx.doi.org/10.1158/0008-5472.CAN-08-1837.
-
(2009)
Cancer Res
, vol.69
, pp. 1758-1767
-
-
Fux, L.1
Feibish, N.2
Cohen-Kaplan, V.3
Gingis-Velitski, S.4
Feld, S.5
Geffen, C.6
-
23
-
-
2542494203
-
Heparanase induces endothelial cell migration via protein kinase B/Akt activation
-
PMID:15044433
-
Gingis-Velitski S, Zetser A, Flugelman MY, Vlodavsky I, Ilan N. Heparanase induces endothelial cell migration via protein kinase B/Akt activation. J Biol Chem 2004; 279:23536-23541. PMID:15044433; http://dx.doi.org/10.1074/jbc.M400554200.
-
(2004)
J Biol Chem
, vol.279
, pp. 23536-23541
-
-
Gingis-Velitski, S.1
Zetser, A.2
Flugelman, M.Y.3
Vlodavsky, I.4
Ilan, N.5
-
24
-
-
32944479184
-
Heparanase induces vascular endothelial growth factor expression: Correlation with p38 phosphorylation levels and Src activation
-
PMID:16452201
-
Zetser A, Bashenko Y, Edovitsky E, Levy-Adam F, Vlodavsky I, Ilan N. Heparanase induces vascular endothelial growth factor expression: correlation with p38 phosphorylation levels and Src activation. Cancer Res 2006; 66:1455-1463. PMID:16452201; http://dx.doi.org/10.1158/0008-5472.CAN-05-1811.
-
(2006)
Cancer Res
, vol.66
, pp. 1455-1463
-
-
Zetser, A.1
Bashenko, Y.2
Edovitsky, E.3
Levy-Adam, F.4
Vlodavsky, I.5
Ilan, N.6
-
25
-
-
77951628417
-
A novel human heparanase splice variant, T5, endowed with protumorigenic characteristics
-
PMID:20007507
-
Barash U, Cohen-Kaplan V, Arvatz G, Gingis-Velitski S, Levy-Adam F, Nativ O, et al. A novel human heparanase splice variant, T5, endowed with protumorigenic characteristics. FASEB J 2010; 24:1239-1248. PMID:20007507; http://dx.doi.org/10.1096/fj.09-147074.
-
(2010)
FASEB J
, vol.24
, pp. 1239-1248
-
-
Barash, U.1
Cohen-Kaplan, V.2
Arvatz, G.3
Gingis-Velitski, S.4
Levy-Adam, F.5
Nativ, O.6
-
26
-
-
57749114628
-
Heparanase augments epidermal growth factor receptor phosphorylation: Correlation with head and neck tumor progression
-
PMID:19074873
-
Cohen-Kaplan V, Doweck I, Naroditsky I, Vlodavsky I, Ilan N. Heparanase augments epidermal growth factor receptor phosphorylation: correlation with head and neck tumor progression. Cancer Res 2008; 68:10077-10085. PMID:19074873; http://dx.doi.org/10.1158/0008-5472.CAN-08-2910.
-
(2008)
Cancer Res
, vol.68
, pp. 10077-10085
-
-
Cohen-Kaplan, V.1
Doweck, I.2
Naroditsky, I.3
Vlodavsky, I.4
Ilan, N.5
-
27
-
-
63349092054
-
Heparanase regulates levels of syndecan-1 in the nucleus
-
PMID:19305494
-
Chen L, Sanderson RD. Heparanase regulates levels of syndecan-1 in the nucleus. PLoS One 2009; 4:4947. PMID:19305494; http://dx.doi.org/10.1371/journal.pone.0004947.
-
(2009)
PLoS One
, vol.4
, pp. 4947
-
-
Chen, L.1
Sanderson, R.D.2
-
28
-
-
33744458461
-
Heparanase regulates esophageal keratinocyte differentiation through nuclear translocation and heparan sulfate cleavage
-
PMID:16759289
-
Kobayashi M, Naomoto Y, Nobuhisa T, Okawa T, Takaoka M, Shirakawa Y, et al. Heparanase regulates esophageal keratinocyte differentiation through nuclear translocation and heparan sulfate cleavage. Differentiation 2006; 74:235-243. PMID:16759289; http://dx.doi.org/10.1111/j.1432-0436.2006.00072.x.
-
(2006)
Differentiation
, vol.74
, pp. 235-243
-
-
Kobayashi, M.1
Naomoto, Y.2
Nobuhisa, T.3
Okawa, T.4
Takaoka, M.5
Shirakawa, Y.6
-
29
-
-
20244381142
-
Emergence of nuclear heparanase induces differentiation of human mammary cancer cells
-
PMID:15845375
-
Nobuhisa T, Naomoto Y, Takaoka M, Tabuchi Y, Ookawa K, Kitamoto D, et al. Emergence of nuclear heparanase induces differentiation of human mammary cancer cells. Biochem Biophys Res Commun 2005; 331:175-180. PMID:15845375; http://dx.doi.org/10.1016/j.bbrc.2005.03.129.
-
(2005)
Biochem Biophys Res Commun
, vol.331
, pp. 175-180
-
-
Nobuhisa, T.1
Naomoto, Y.2
Takaoka, M.3
Tabuchi, Y.4
Ookawa, K.5
Kitamoto, D.6
-
30
-
-
2942598494
-
Human heparanase nuclear localization and enzymatic activity
-
PMID:15034597
-
Schubert SY, Ilan N, Shushy M, Ben-Izhak O, Vlodavsky I, Goldshmidt O. Human heparanase nuclear localization and enzymatic activity. Lab Invest 2004; 84:535-544. PMID:15034597; http://dx.doi.org/10.1038/labinvest.3700084.
-
(2004)
Lab Invest
, vol.84
, pp. 535-544
-
-
Schubert, S.Y.1
Ilan, N.2
Shushy, M.3
Ben-Izhak, O.4
Vlodavsky, I.5
Goldshmidt, O.6
-
31
-
-
33845582727
-
Heparanase localization and expression by head and neck cancer: Correlation with tumor progression and patient survival
-
PMID:17217623
-
Doweck I, Kaplan-Cohen V, Naroditsky I, Sabo E, Ilan N, Vlodavsky I. Heparanase localization and expression by head and neck cancer: correlation with tumor progression and patient survival. Neoplasia 2006; 8:1055-1061. PMID:17217623; http://dx.doi.org/10.1593/neo.06577.
-
(2006)
Neoplasia
, vol.8
, pp. 1055-1061
-
-
Doweck, I.1
Kaplan-Cohen, V.2
Naroditsky, I.3
Sabo, E.4
Ilan, N.5
Vlodavsky, I.6
-
32
-
-
13744255420
-
Heparanase expression correlates with malignant potential in human colon cancer
-
PMID:15625607
-
Nobuhisa T, Naomoto Y, Ohkawa T, Takaoka M, Ono R, Murata T, et al. Heparanase expression correlates with malignant potential in human colon cancer. J Cancer Res Clin Oncol 2005.131:229-237. PMID:15625607; http://dx.doi.org/10.1007/s00432-004-0644-x.
-
(2005)
J Cancer Res Clin Oncol
, vol.131
, pp. 229-237
-
-
Nobuhisa, T.1
Naomoto, Y.2
Ohkawa, T.3
Takaoka, M.4
Ono, R.5
Murata, T.6
-
33
-
-
34147094691
-
Translocation of heparanase into nucleus results in cell differentiation
-
PMID:17284253
-
Nobuhisa T, Naomoto Y, Okawa T, Takaoka M, Gunduz M, Motoki T, et al. Translocation of heparanase into nucleus results in cell differentiation. Cancer Sci 2007; 98:535-540. PMID:17284253; http://dx.doi.org/10.1111/j.1349-7006.2007.00420.x.
-
(2007)
Cancer Sci
, vol.98
, pp. 535-540
-
-
Nobuhisa, T.1
Naomoto, Y.2
Okawa, T.3
Takaoka, M.4
Gunduz, M.5
Motoki, T.6
-
34
-
-
4944263842
-
Localization of heparanase in esophageal cancer cells: Respective roles in prognosis and differentiation
-
PMID:15286661
-
Ohkawa T, Naomoto Y, Takaoka M, Nobuhisa T, Noma K, Motoki T, et al. Localization of heparanase in esophageal cancer cells: respective roles in prognosis and differentiation. Lab Invest 2004; 84:1289-304. PMID:15286661; http://dx.doi.org/10.1038/labinvest.3700159.
-
(2004)
Lab Invest
, vol.84
, pp. 1289-1304
-
-
Ohkawa, T.1
Naomoto, Y.2
Takaoka, M.3
Nobuhisa, T.4
Noma, K.5
Motoki, T.6
-
35
-
-
63049103410
-
Dynamic histone variant exchange accompanies gene induction in T cells
-
PMID:19158270
-
Sutcliffe EL, Parish IA, He YQ, Juelich T, Tierney ML, Rangasamy D, et al. Dynamic histone variant exchange accompanies gene induction in T cells. Mol Cell Biol 2009; 29:1972-1986. PMID:19158270; http://dx.doi.org/10.1128/MCB.01590-08.
-
(2009)
Mol Cell Biol
, vol.29
, pp. 1972-1986
-
-
Sutcliffe, E.L.1
Parish, I.A.2
He, Y.Q.3
Juelich, T.4
Tierney, M.L.5
Rangasamy, D.6
-
36
-
-
34249728340
-
Heparanase influences expression and shedding of syndecan-1, and its expression by the bone marrow environment is a bad prognostic factor in multiple myeloma
-
PMID:17339423
-
Mahtouk K, Hose D, Raynaud P, Hundemer M, Jourdan M, Jourdan E, et al. Heparanase influences expression and shedding of syndecan-1, and its expression by the bone marrow environment is a bad prognostic factor in multiple myeloma. Blood 2007; 109:4914-4923. PMID:17339423; http://dx.doi.org/10.1182/blood-2006-08-043232.
-
(2007)
Blood
, vol.109
, pp. 4914-4923
-
-
Mahtouk, K.1
Hose, D.2
Raynaud, P.3
Hundemer, M.4
Jourdan, M.5
Jourdan, E.6
-
37
-
-
43349099904
-
Determinants of a transcriptionally competent environment at the GM-CSF promoter
-
PMID:18344520
-
Brettingham-Moore KH, Sprod OR, Chen X, Oakford P, Shannon MF, Holloway AF. Determinants of a transcriptionally competent environment at the GM-CSF promoter. Nucleic Acids Res 2008; 36:2639-2653. PMID:18344520; http://dx.doi.org/10.1093/nar/gkn117.
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 2639-2653
-
-
Brettingham-Moore, K.H.1
Sprod, O.R.2
Chen, X.3
Oakford, P.4
Shannon, M.F.5
Holloway, A.F.6
-
38
-
-
16244411972
-
Histone dynamics on the interleukin-2 gene in response to T-cell activation
-
PMID:15798206
-
Chen X, Wang J, Woltring D, Gerondakis S, Shannon MF. Histone dynamics on the interleukin-2 gene in response to T-cell activation. Mol Cell Biol 2005; 25:3209-3219. PMID:15798206; http://dx.doi.org/10.1128/MCB.25.8.3209-19.2005.
-
(2005)
Mol Cell Biol
, vol.25
, pp. 3209-3219
-
-
Chen, X.1
Wang, J.2
Woltring, D.3
Gerondakis, S.4
Shannon, M.F.5
-
39
-
-
0038094502
-
Histones are first hyperacetylated and then lose contact with the activated PHO5 promoter
-
PMID:12820972
-
Reinke H, Hörz W. Histones are first hyperacetylated and then lose contact with the activated PHO5 promoter. Mol Cell 2003; 11:1599-1607. PMID:12820972; http://dx.doi.org/10.1016/S1097-2765(03)00186-2.
-
(2003)
Mol Cell
, vol.11
, pp. 1599-1607
-
-
Reinke, H.1
Hörz, W.2
-
40
-
-
0031106575
-
Transcription factors vs. nucleosomes: Regulation of the PHO5 promoter in yeast
-
PMID:9066259
-
Svaren J, Hörz W. Transcription factors vs. nucleosomes: regulation of the PHO5 promoter in yeast. Trends Biochem Sci 1997; 22:93-97. PMID:9066259; http://dx.doi.org/10.1016/S0968-0004(97)01001-3.
-
(1997)
Trends Biochem Sci
, vol.22
, pp. 93-97
-
-
Svaren, J.1
Hörz, W.2
-
41
-
-
34250745886
-
Nucleosome stability mediated by histone variants H3.3 and H2A.Z
-
PMID:17575053
-
Jin C, Felsenfeld G. Nucleosome stability mediated by histone variants H3.3 and H2A.Z. Genes Dev 2007; 21:1519-1529. PMID:17575053; http://dx.doi.org/10.1101/gad.1547707.
-
(2007)
Genes Dev
, vol.21
, pp. 1519-1529
-
-
Jin, C.1
Felsenfeld, G.2
-
42
-
-
0038492426
-
MLL repression domain interacts with histone deacetylases, the polycomb group proteins HPC2 and BMI-1, and the corepressor C-terminal-binding protein
-
PMID:12829790
-
Xia ZB, Anderson M, Diaz MO, Zeleznik-Le NJ. MLL repression domain interacts with histone deacetylases, the polycomb group proteins HPC2 and BMI-1, and the corepressor C-terminal-binding protein. Proc Natl Acad Sci USA 2003; 100:8342-8347. PMID:12829790; http://dx.doi.org/10.1073/pnas.1436338100.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 8342-8347
-
-
Xia, Z.B.1
Anderson, M.2
Diaz, M.O.3
Zeleznik-Le, N.J.4
-
43
-
-
33750435187
-
Regulatory functions of nuclear hexokinase1 complex in glucose signaling
-
PMID:17081979
-
Cho YH, Yoo SD, Sheen J. Regulatory functions of nuclear hexokinase1 complex in glucose signaling. Cell 2006; 127:579-589. PMID:17081979; http://dx.doi.org/10.1016/j.cell.2006.09.028.
-
(2006)
Cell
, vol.127
, pp. 579-589
-
-
Cho, Y.H.1
Yoo, S.D.2
Sheen, J.3
-
44
-
-
33750433556
-
The C terminus of the L-type voltage-gated calcium channel Ca(V)1.2 encodes a transcription factor
-
PMID:17081980
-
Gomez-Ospina N, Tsuruta F, Barreto-Chang O, Hu L, Dolmetsch R. The C terminus of the L-type voltage-gated calcium channel Ca(V)1.2 encodes a transcription factor. Cell 2006; 127:591-606. PMID:17081980; http://dx.doi.org/10.1016/j.cell.2006.10.017.
-
(2006)
Cell
, vol.127
, pp. 591-606
-
-
Gomez-Ospina, N.1
Tsuruta, F.2
Barreto-Chang, O.3
Hu, L.4
Dolmetsch, R.5
The, C.6
-
45
-
-
33746648069
-
Cell signaling. Protein kinases seek close encounters with active genes
-
PMID:16873633
-
Edmunds JW, Mahadevan LC. Cell signaling. Protein kinases seek close encounters with active genes. Science 2006; 313:449-451. PMID:16873633; http://dx.doi.org/10.1126/science.1131158.
-
(2006)
Science
, vol.313
, pp. 449-451
-
-
Edmunds, J.W.1
Mahadevan, L.C.2
-
46
-
-
51649088697
-
Chromatin-bound mitogen-activated protein kinases transmit dynamic signals in transcription complexes in beta-cells
-
PMID:18755896
-
Lawrence MC, McGlynn K, Shao C, Duan L, Naziruddin B, Levy MF, et al. Chromatin-bound mitogen-activated protein kinases transmit dynamic signals in transcription complexes in beta-cells. Proc Natl Acad Sci USA 2008; 105:13315-13320. PMID:18755896; http://dx.doi.org/10.1073/pnas.0806465105.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 13315-13320
-
-
Lawrence, M.C.1
McGlynn, K.2
Shao, C.3
Duan, L.4
Naziruddin, B.5
Levy, M.F.6
-
47
-
-
33746611519
-
Activated signal transduction kinases frequently occupy target genes
-
PMID:16873666
-
Pokholok DK, Zeitlinger J, Hannett NM, Reynolds DB, Young RA. Activated signal transduction kinases frequently occupy target genes. Science 2006; 313:533-536. PMID:16873666; http://dx.doi.org/10.1126/science.1127677.
-
(2006)
Science
, vol.313
, pp. 533-536
-
-
Pokholok, D.K.1
Zeitlinger, J.2
Hannett, N.M.3
Reynolds, D.B.4
Young, R.A.5
-
48
-
-
65249103282
-
Newly generated heparanase knock-out mice unravel co-regulation of heparanase and matrix metalloproteinases
-
PMID:19360105
-
Zcharia E, Jia J, Zhang X, Baraz L, Lindahl U, Peretz T, et al. Newly generated heparanase knock-out mice unravel co-regulation of heparanase and matrix metalloproteinases. PLoS One 2009; 4:5181. PMID:19360105; http://dx.doi.org/10.1371/journal.pone.0005181.
-
(2009)
PLoS One
, vol.4
, pp. 5181
-
-
Zcharia, E.1
Jia, J.2
Zhang, X.3
Baraz, L.4
Lindahl, U.5
Peretz, T.6
-
49
-
-
33750351874
-
Genome-wide location analysis of the stress-activated MAP kinase Hog1 in yeast
-
PMID:16884916
-
Pascual-Ahuir A, Struhl K, Proft M. Genome-wide location analysis of the stress-activated MAP kinase Hog1 in yeast. Methods 2006; 40:272-278. PMID:16884916; http://dx.doi.org/10.1016/j.ymeth.2006.06.007.
-
(2006)
Methods
, vol.40
, pp. 272-278
-
-
Pascual-Ahuir, A.1
Struhl, K.2
Proft, M.3
-
50
-
-
0036143654
-
P38-Dependent marking of inflammatory genes for increased NFkappaB recruitment
-
PMID:11743587
-
Saccani S, Pantano S, Natoli G. p38-Dependent marking of inflammatory genes for increased NFkappaB recruitment. Nat Immunol 2002; 3:69-75. PMID:11743587; http://dx.doi.org/10.1038/ni748.
-
(2002)
Nat Immunol
, vol.3
, pp. 69-75
-
-
Saccani, S.1
Pantano, S.2
Natoli, G.3
-
51
-
-
0035012401
-
Stress-induced map kinase Hog1 is part of transcription activation complexes
-
PMID:11336700
-
Alepuz PM, Jovanovic A, Reiser V, Ammerer G. Stress-induced map kinase Hog1 is part of transcription activation complexes. Mol Cell 2001; 7:767-777. PMID:11336700; http://dx.doi.org/10.1016/S1097-2765(01)00221-0.
-
(2001)
Mol Cell
, vol.7
, pp. 767-777
-
-
Alepuz, P.M.1
Jovanovic, A.2
Reiser, V.3
Ammerer, G.4
-
52
-
-
33751209494
-
Proteins kinases: Chromatin-associated enzymes?
-
PMID:17129776
-
Chow CW, Davis RJ. Proteins kinases: chromatin-associated enzymes? Cell 2006; 127:887-890. PMID:17129776; http://dx.doi.org/10.1016/j.cell.2006.11.015.
-
(2006)
Cell
, vol.127
, pp. 887-890
-
-
Chow, C.W.1
Davis, R.J.2
-
53
-
-
4444320809
-
MAP kinases as structural adaptors and enzymatic activators in transcription complexes
-
PMID:15286173
-
Edmunds JW, Mahadevan LC. MAP kinases as structural adaptors and enzymatic activators in transcription complexes. J Cell Sci 2004; 117:3715-723. PMID:15286173; http://dx.doi.org/10.1242/jcs.01346.
-
(2004)
J Cell Sci
, vol.117
, pp. 3715-3723
-
-
Edmunds, J.W.1
Mahadevan, L.C.2
-
54
-
-
33745959274
-
The stress-activated Hog1 kinase is a selective transcriptional elongation factor for genes responding to osmotic stress
-
PMID:16857590
-
Proft M, Mas G, de Nadal E, Vendrell A, Noriega N, Struhl K, et al. The stress-activated Hog1 kinase is a selective transcriptional elongation factor for genes responding to osmotic stress. Mol Cell 2006; 23:241-250. PMID:16857590; http://dx.doi.org/10.1016/j.molcel.2006.05.031.
-
(2006)
Mol Cell
, vol.23
, pp. 241-250
-
-
Proft, M.1
Mas, G.2
de Nadal, E.3
Vendrell, A.4
Noriega, N.5
Struhl, K.6
-
55
-
-
0036289351
-
Hog1 kinase converts the Sko1-Cyc8-Tup1 repressor complex into an activator that recruits SAGA and SWI/SNF in response to osmotic stress
-
PMID:12086627
-
Proft M, Struhl K. Hog1 kinase converts the Sko1-Cyc8-Tup1 repressor complex into an activator that recruits SAGA and SWI/SNF in response to osmotic stress. Mol Cell 2002; 9:1307-1317. PMID:12086627; http://dx.doi.org/10.1016/S1097-2765(02)00557-9.
-
(2002)
Mol Cell
, vol.9
, pp. 1307-1317
-
-
Proft, M.1
Struhl, K.2
-
56
-
-
2342465953
-
Recent highlights of RNA-polymerase-II-mediated transcription
-
PMID:15145350
-
Sims RJ, 3rd, Mandal SS, Reinberg D. Recent highlights of RNA-polymerase-II-mediated transcription. Curr Opin Cell Biol 2004; 16:263-271. PMID:15145350; http://dx.doi.org/10.1016/j.ceb.2004.04.004.
-
(2004)
Curr Opin Cell Biol
, vol.16
, pp. 263-271
-
-
Sims, R.J.1
Mandal, S.S.2
Reinberg, D.3
-
57
-
-
0033681250
-
Ordered recruitment of chromatin modifying and general transcription factors to the IFNbeta promoter
-
PMID:11106736
-
Agalioti T, Lomvardas S, Parekh B, Yie J, Maniatis T, Thanos D. Ordered recruitment of chromatin modifying and general transcription factors to the IFNbeta promoter. Cell 2000; 103:667-678. PMID:11106736; http://dx.doi.org/10.1016/S0092-8674(00)00169-0.
-
(2000)
Cell
, vol.103
, pp. 667-678
-
-
Agalioti, T.1
Lomvardas, S.2
Parekh, B.3
Yie, J.4
Maniatis, T.5
Thanos, D.6
-
58
-
-
0036216109
-
Chromatin structure and gene regulation in the immune system
-
PMID:11861609
-
Smale ST, Fisher AG. Chromatin structure and gene regulation in the immune system. Annu Rev Immunol 2002; 20:427-462. PMID:11861609; http://dx.doi.org/10.1146/annurev.immunol.20.100301.064739.
-
(2002)
Annu Rev Immunol
, vol.20
, pp. 427-462
-
-
Smale, S.T.1
Fisher, A.G.2
-
59
-
-
73349112246
-
Interplay between chromatin remodeling and epigenetic changes during lineage-specific commitment to granzyme B expression
-
PMID:19915065
-
Juelich T, Sutcliffe EL, Denton A, He Y, Doherty PC, Parish CR, et al. Interplay between chromatin remodeling and epigenetic changes during lineage-specific commitment to granzyme B expression. J Immunol 2009; 183:7063-7072. PMID:19915065; http://dx.doi.org/10.4049/jimmunol.0901522.
-
(2009)
J Immunol
, vol.183
, pp. 7063-7072
-
-
Juelich, T.1
Sutcliffe, E.L.2
Denton, A.3
He, Y.4
Doherty, P.C.5
Parish, C.R.6
-
60
-
-
0034610814
-
The language of covalent histone modifications
-
PMID:10638745
-
Strahl BD, Allis CD. The language of covalent histone modifications. Nature 2000; 403:41-45. PMID:10638745; http://dx.doi.org/10.1038/47412.
-
(2000)
Nature
, vol.403
, pp. 41-45
-
-
Strahl, B.D.1
Allis, C.D.2
-
61
-
-
16344368814
-
Histone demethylation catalysed by LSD1 is a flavin-dependent oxidative process
-
PMID:15811342
-
Forneris F, Binda C, Vanoni MA, Mattevi A, Battaglioli E. Histone demethylation catalysed by LSD1 is a flavin-dependent oxidative process. FEBS Lett 2005; 579:2203-2207. PMID:15811342; http://dx.doi.org/10.1016/j.febslet.2005.03.015.
-
(2005)
FEBS Lett
, vol.579
, pp. 2203-2207
-
-
Forneris, F.1
Binda, C.2
Vanoni, M.A.3
Mattevi, A.4
Battaglioli, E.5
-
62
-
-
24144462170
-
LSD1 demethylates repressive histone marks to promote androgen-receptor-dependent transcription
-
PMID:16079795
-
Metzger E, Wissmann M, Yin N, Müller JM, Schneider R, Peters AH, et al. LSD1 demethylates repressive histone marks to promote androgen-receptor-dependent transcription. Nature 2005; 437:436-439. PMID:16079795.
-
(2005)
Nature
, vol.437
, pp. 436-439
-
-
Metzger, E.1
Wissmann, M.2
Yin, N.3
Müller, J.M.4
Schneider, R.5
Peters, A.H.6
-
63
-
-
11144332565
-
Histone demethylation mediated by the nuclear amine oxidase homolog LSD1
-
PMID:15620353
-
Shi Y, Lan F, Matson C, Mulligan P, Whetstine JR, Cole PA, et al. Histone demethylation mediated by the nuclear amine oxidase homolog LSD1. Cell 2004; 119:941-953; PMID:15620353; http://dx.doi.org/10.1016/j.cell.2004.12.012.
-
(2004)
Cell
, vol.119
, pp. 941-953
-
-
Shi, Y.1
Lan, F.2
Matson, C.3
Mulligan, P.4
Whetstine, J.R.5
Cole, P.A.6
-
64
-
-
77950460256
-
Phosphorylation of histone H3T6 by PKCbeta(I) controls demethylation at histone H3K4
-
PMID:20228790
-
Metzger E, Imhof A, Patel D, Kahl P, Hoffmeyer K, Friedrichs N, et al. Phosphorylation of histone H3T6 by PKCbeta(I) controls demethylation at histone H3K4. Nature 2010; 464:792-796. PMID:20228790; http://dx.doi.org/10.1038/nature08839.
-
(2010)
Nature
, vol.464
, pp. 792-796
-
-
Metzger, E.1
Imhof, A.2
Patel, D.3
Kahl, P.4
Hoffmeyer, K.5
Friedrichs, N.6
-
65
-
-
68749115479
-
New roles of flavoproteins in molecular cell biology: Histone demethylase LSD1 and chromatin
-
PMID:19624733
-
Forneris F, Battaglioli E, Mattevi A, Binda C. New roles of flavoproteins in molecular cell biology: histone demethylase LSD1 and chromatin. FEBS J 2009; 276:4304-4312. PMID:19624733; http://dx.doi.org/10.1111/j.1742-4658.2009.07142.x.
-
(2009)
FEBS J
, vol.276
, pp. 4304-4312
-
-
Forneris, F.1
Battaglioli, E.2
Mattevi, A.3
Binda, C.4
-
66
-
-
34547132094
-
Structural basis of LSD1-CoREST selectivity in histone H3 recognition
-
PMID:17537733
-
Forneris F, Binda C, Adamo A, Battaglioli E, Mattevi A. Structural basis of LSD1-CoREST selectivity in histone H3 recognition. J Biol Chem 2007; 282:20070-20074. PMID:17537733; http://dx.doi.org/10.1074/jbc.C700100200.
-
(2007)
J Biol Chem
, vol.282
, pp. 20070-20074
-
-
Forneris, F.1
Binda, C.2
Adamo, A.3
Battaglioli, E.4
Mattevi, A.5
-
67
-
-
77950678085
-
Coordinated chromatin control: Structural and functional linkage of DNA and histone methylation
-
PMID:20210320
-
Cheng X, Blumenthal RM. Coordinated chromatin control: structural and functional linkage of DNA and histone methylation. Biochemistry 2010; 49:2999-3008. PMID:20210320; http://dx.doi.org/10.1021/bi100213t.
-
(2010)
Biochemistry
, vol.49
, pp. 2999-3008
-
-
Cheng, X.1
Blumenthal, R.M.2
-
68
-
-
70449122130
-
Inhibition of the histone demethylase LSD1 blocks alpha-herpesvirus lytic replication and reactivation from latency
-
PMID:19855399
-
Liang Y, Vogel JL, Narayanan A, Peng H, Kristie TM. Inhibition of the histone demethylase LSD1 blocks alpha-herpesvirus lytic replication and reactivation from latency. Nat Med 2009; 15:1312-1317. PMID:19855399; http://dx.doi.org/10.1038/nm.2051.
-
(2009)
Nat Med
, vol.15
, pp. 1312-1317
-
-
Liang, Y.1
Vogel, J.L.2
Narayanan, A.3
Peng, H.4
Kristie, T.M.5
-
69
-
-
0036203419
-
The phosphorylation status of nuclear NFkappaB determines its association with CBP/p300 or HDAC-1
-
PMID:11931769
-
Zhong H, May MJ, Jimi E, Ghosh S. The phosphorylation status of nuclear NFkappaB determines its association with CBP/p300 or HDAC-1. Mol Cell 2002; 9:625-636. PMID:11931769; http://dx.doi.org/10.1016/S1097-2765(02)00477-X.
-
(2002)
Mol Cell
, vol.9
, pp. 625-636
-
-
Zhong, H.1
May, M.J.2
Jimi, E.3
Ghosh, S.4
-
70
-
-
52449110702
-
ZNF198 stabilizes the LSD1-CoREST-HDAC1 complex on chromatin through its MYM-type zinc fingers
-
PMID:18806873
-
Gocke CB, Yu H. ZNF198 stabilizes the LSD1-CoREST-HDAC1 complex on chromatin through its MYM-type zinc fingers. PLoS One 2008; 3:3255. PMID:18806873; http://dx.doi.org/10.1371/journal.pone.0003255.
-
(2008)
PLoS One
, vol.3
, pp. 3255
-
-
Gocke, C.B.1
Yu, H.2
-
71
-
-
0035888026
-
Chromatin remodeling, measured by a novel real-time polymerase chain reaction assay, across the proximal promoter region of the IL-2 gene
-
PMID:11591776
-
Rao S, Procko E, Shannon MF. Chromatin remodeling, measured by a novel real-time polymerase chain reaction assay, across the proximal promoter region of the IL-2 gene. J Immunol 2001; 167:4494-4503. PMID:11591776.
-
(2001)
J Immunol
, vol.167
, pp. 4494-4503
-
-
Rao, S.1
Procko, E.2
Shannon, M.F.3
-
72
-
-
0346195644
-
C-Rel is required for chromatin remodeling across the IL-2 gene promoter
-
PMID:12646638
-
Rao S, Gerondakis S, Woltring D, Shannon MF. C-Rel is required for chromatin remodeling across the IL-2 gene promoter. J Immunol 2003; 170:3724-3731. PMID:12646638.
-
(2003)
J Immunol
, vol.170
, pp. 3724-3731
-
-
Rao, S.1
Gerondakis, S.2
Woltring, D.3
Shannon, M.F.4
-
73
-
-
68149128490
-
Epigenetic profiling at mouse imprinted gene clusters reveals novel epigenetic and genetic features at differentially methylated regions
-
PMID:19542493
-
Dindot SV, Person R, Strivens M, Garcia R, Beaudet AL. Epigenetic profiling at mouse imprinted gene clusters reveals novel epigenetic and genetic features at differentially methylated regions. Genome Res 2009; 19:1374-1383. PMID:19542493; http://dx.doi.org/10.1101/gr.089185.108.
-
(2009)
Genome Res
, vol.19
, pp. 1374-1383
-
-
Dindot, S.V.1
Person, R.2
Strivens, M.3
Garcia, R.4
Beaudet, A.L.5
-
74
-
-
34547641224
-
Genome-wide analyses reveal properties of redundant and specific promoter occupancy within the ETS gene family
-
PMID:17652178
-
Hollenhorst PC, Shah AA, Hopkins C, Graves BJ. Genome-wide analyses reveal properties of redundant and specific promoter occupancy within the ETS gene family. Genes Dev 2007; 21:1882-1894. PMID:17652178; http://dx.doi.org/10.1101/gad.1561707.
-
(2007)
Genes Dev
, vol.21
, pp. 1882-1894
-
-
Hollenhorst, P.C.1
Shah, A.A.2
Hopkins, C.3
Graves, B.J.4
-
75
-
-
34047211996
-
Comparison of sample preparation methods for ChIP-chip assays
-
PMID:17140114
-
O'Geen H, Nicolet CM, Blahnik K, Green R, Farnham PJ. Comparison of sample preparation methods for ChIP-chip assays. Biotechniques 2006; 41:577-580. PMID:17140114; http://dx.doi.org/10.2144/000112268.
-
(2006)
Biotechniques
, vol.41
, pp. 577-580
-
-
O'Geen, H.1
Nicolet, C.M.2
Blahnik, K.3
Green, R.4
Farnham, P.J.5
-
76
-
-
57349149434
-
Genome-wide studies highlight indirect links between human replication origins and gene regulation
-
PMID:18838675
-
Cadoret JC, Meisch F, Hassan-Zadeh V, Luyten I, Guillet C, Duret L, et al. Genome-wide studies highlight indirect links between human replication origins and gene regulation. Proc Natl Acad Sci USA 2008; 105:15837-15842. PMID:18838675; http://dx.doi.org/10.1073/pnas.0805208105.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 15837-15842
-
-
Cadoret, J.C.1
Meisch, F.2
Hassan-Zadeh, V.3
Luyten, I.4
Guillet, C.5
Duret, L.6
-
77
-
-
44349131472
-
Gene silencing in cancer by histone H3 lysine 27 trimethylation independent of promoter DNA methylation
-
PMID:18488029
-
Kondo Y, Shen L, Cheng AS, Ahmed S, Boumber Y, Charo C, et al. Gene silencing in cancer by histone H3 lysine 27 trimethylation independent of promoter DNA methylation. Nat Genet 2008; 40:741-7450. PMID:18488029; http://dx.doi.org/10.1038/ng.159.
-
(2008)
Nat Genet
, vol.40
, pp. 741-7450
-
-
Kondo, Y.1
Shen, L.2
Cheng, A.S.3
Ahmed, S.4
Boumber, Y.5
Charo, C.6
-
78
-
-
33646865180
-
Control of developmental regulators by Polycomb in human embryonic stem cells
-
PMID:16630818
-
Lee TI, Jenner RG, Boyer LA, Guenther MG, Levine SS, Kumar RM, et al. Control of developmental regulators by Polycomb in human embryonic stem cells. Cell 2006; 125:301-313. PMID:16630818; http://dx.doi.org/10.1016/j.cell.2006.02.043.
-
(2006)
Cell
, vol.125
, pp. 301-313
-
-
Lee, T.I.1
Jenner, R.G.2
Boyer, L.A.3
Guenther, M.G.4
Levine, S.S.5
Kumar, R.M.6
-
79
-
-
58249085824
-
Role of the murine reprogramming factors in the induction of pluripotency
-
PMID:19167336
-
Sridharan R, Tchieu J, Mason MJ, Yachechko R, Kuoy E, Horvath S, et al. Role of the murine reprogramming factors in the induction of pluripotency. Cell 2009; 136:364-377. PMID:19167336; http://dx.doi.org/10.1016/j.cell.2009.01.001.
-
(2009)
Cell
, vol.136
, pp. 364-377
-
-
Sridharan, R.1
Tchieu, J.2
Mason, M.J.3
Yachechko, R.4
Kuoy, E.5
Horvath, S.6
|