-
1
-
-
0024988099
-
4-Dimensional heteronuclear triple-resonance NMR-spectroscopy of interleukin-1-beta in solution
-
Kay LE, Clore GM, Bax A, Gronenborn AM (1990) 4-Dimensional heteronuclear triple-resonance NMR-spectroscopy of interleukin-1-beta in solution. Science 249:411-414.
-
(1990)
Science
, vol.249
, pp. 411-414
-
-
Kay, L.E.1
Clore, G.M.2
Bax, A.3
Gronenborn, A.M.4
-
2
-
-
0033582287
-
Chemical ligation of folded recombinant proteins: Segmental isotopic labeling of domains for NMR studies
-
Xu R, Ayers B, Cowburn D, Muir TW (1999) Chemical ligation of folded recombinant proteins: segmental isotopic labeling of domains for NMR studies. Proc Natl Acad Sci USA 96:388-393.
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 388-393
-
-
Xu, R.1
Ayers, B.2
Cowburn, D.3
Muir, T.W.4
-
3
-
-
0030735988
-
Solution NMR spectroscopy beyond 25 kDa
-
Kay LE, Gardner KH (1997) Solution NMR spectroscopy beyond 25 kDa. Curr Opin Struct Biol 7:722-731.
-
(1997)
Curr Opin Struct Biol
, vol.7
, pp. 722-731
-
-
Kay, L.E.1
Gardner, K.H.2
-
4
-
-
0032898682
-
A robust and cost-effective method for the production of Val, Leu, Ile (delta 1) methyl-protonated N-15-, C-13-, H-2-labeled proteins
-
Goto NK, Gardner KH, Mueller GA, Willis RC, Kay LE (1999) A robust and cost-effective method for the production of Val, Leu, Ile (delta 1) methyl-protonated N-15-, C-13-, H-2-labeled proteins. J Biomol NMR 13:369-374.
-
(1999)
J Biomol NMR
, vol.13
, pp. 369-374
-
-
Goto, N.K.1
Gardner, K.H.2
Mueller, G.A.3
Willis, R.C.4
Kay, L.E.5
-
5
-
-
33644774471
-
Optimal isotope labelling for NMR protein structure determinations
-
Kainosho M, et al. (2006) Optimal isotope labelling for NMR protein structure determinations. Nature 440:52-57.
-
(2006)
Nature
, vol.440
, pp. 52-57
-
-
Kainosho, M.1
-
6
-
-
79960607694
-
Solid-state NMR of proteins sedimented by ultracentrifugation
-
Bertini I, et al. (2011) Solid-state NMR of proteins sedimented by ultracentrifugation. Proc Natl Acad Sci USA 108:10396-10399.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 10396-10399
-
-
Bertini, I.1
-
7
-
-
0030612833
-
Attenuated T-2 relaxation by mutual cancellation of dipole-dipole coupling and chemical shift anisotropy indicates an avenue to NMR structures of very large biological macromolecules in solution
-
Pervushin K, Riek R, Wider G, Wuthrich K (1997) Attenuated T-2 relaxation by mutual cancellation of dipole-dipole coupling and chemical shift anisotropy indicates an avenue to NMR structures of very large biological macromolecules in solution. Proc Natl Acad Sci USA 94:12366-12371.
-
(1997)
Proc Natl Acad Sci USA
, vol.94
, pp. 12366-12371
-
-
Pervushin, K.1
Riek, R.2
Wider, G.3
Wuthrich, K.4
-
9
-
-
33846928691
-
Quantitative dynamics and binding studies of the 20 S proteasome by NMR
-
Sprangers R, Kay LE (2007) Quantitative dynamics and binding studies of the 20 S proteasome by NMR. Nature 445:618-622.
-
(2007)
Nature
, vol.445
, pp. 618-622
-
-
Sprangers, R.1
Kay, L.E.2
-
10
-
-
33745863903
-
Disorder-order folding transitions underlie catalysis in the helicase motor of SecA
-
Keramisanou D, et al. (2006) Disorder-order folding transitions underlie catalysis in the helicase motor of SecA. Nat Struct Mol Biol 13:594-602.
-
(2006)
Nat Struct Mol Biol
, vol.13
, pp. 594-602
-
-
Keramisanou, D.1
-
11
-
-
0036308102
-
Protein NMR structure determination with automated NOE assignment using the new software CANDID and the torsion angle dynamics algorithm DYANA
-
Herrmann T, Guntert P, Wuthrich K (2002) Protein NMR structure determination with automated NOE assignment using the new software CANDID and the torsion angle dynamics algorithm DYANA. J Mol Biol 319:209-227.
-
(2002)
J Mol Biol
, vol.319
, pp. 209-227
-
-
Herrmann, T.1
Guntert, P.2
Wuthrich, K.3
-
12
-
-
80051691505
-
Exclusively NOESY-based automated NMR assignment and structure determination of proteins
-
Ikeya T, et al. (2011) Exclusively NOESY-based automated NMR assignment and structure determination of proteins. J Biomol NMR 50:137-146.
-
(2011)
J Biomol NMR
, vol.50
, pp. 137-146
-
-
Ikeya, T.1
-
13
-
-
31944451135
-
A topology-constrained distance network algorithm for protein structure determination from NOESY data
-
Huang YJ, Tejero R, Powers R, Montelione GT (2006) A topology-constrained distance network algorithm for protein structure determination from NOESY data. Proteins 62:587-603.
-
(2006)
Proteins
, vol.62
, pp. 587-603
-
-
Huang, Y.J.1
Tejero, R.2
Powers, R.3
Montelione, G.T.4
-
14
-
-
84863011912
-
Blind testing of routine, fully automated determination of protein structures from NMR data
-
Rosato A, et al. (2012) Blind testing of routine, fully automated determination of protein structures from NMR data. Structure 20:227-236.
-
(2012)
Structure
, vol.20
, pp. 227-236
-
-
Rosato, A.1
-
15
-
-
42449146665
-
Consistent blind protein structure generation from NMR chemical shift data
-
Shen Y, et al. (2008) Consistent blind protein structure generation from NMR chemical shift data. Proc Natl Acad Sci USA 105:4685-4690.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 4685-4690
-
-
Shen, Y.1
-
17
-
-
77149179401
-
NMR structure determination for larger proteins using backbone-only data
-
Raman S, et al. (2010) NMR structure determination for larger proteins using backbone-only data. Science 327:1014-1018.
-
(2010)
Science
, vol.327
, pp. 1014-1018
-
-
Raman, S.1
-
18
-
-
79954990720
-
Determination of the structures of symmetric protein oligomers from NMR chemical shifts and residual dipolar couplings
-
Sgourakis NG, et al. (2011) Determination of the structures of symmetric protein oligomers from NMR chemical shifts and residual dipolar couplings. J Am Chem Soc 133:6288-6298.
-
(2011)
J Am Chem Soc
, vol.133
, pp. 6288-6298
-
-
Sgourakis, N.G.1
-
19
-
-
0037076277
-
CLOUDS, a protocol for deriving a molecular proton density via NMR
-
Grishaev A, Llinas M (2002) CLOUDS, a protocol for deriving a molecular proton density via NMR. Proc Natl Acad Sci USA 99:6707-6712.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 6707-6712
-
-
Grishaev, A.1
Llinas, M.2
-
20
-
-
0346103679
-
Rapid protein fold determination using unassigned NMR data
-
Meiler J, Baker D (2003) Rapid protein fold determination using unassigned NMR data. Proc Natl Acad Sci USA 100:15404-15409.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 15404-15409
-
-
Meiler, J.1
Baker, D.2
-
21
-
-
18844433630
-
Assessing precision and accuracy of protein structures derived from NMR data
-
Snyder DA, Bhattacharya A, Huang YJ, Montelione GT (2005) Assessing precision and accuracy of protein structures derived from NMR data. Proteins 59:655-661.
-
(2005)
Proteins
, vol.59
, pp. 655-661
-
-
Snyder, D.A.1
Bhattacharya, A.2
Huang, Y.J.3
Montelione, G.T.4
-
22
-
-
85013746467
-
-
Elsevier Academic Press, London
-
Cavanagh J, Fairbrother WJ, Palmer AG, Rance M, Skelton NJ (2007) Protein NMR Spectroscopy (Elsevier Academic Press, London), pp 553-678.
-
(2007)
Protein NMR Spectroscopy
, pp. 553-678
-
-
Cavanagh, J.1
Fairbrother, W.J.2
Palmer, A.G.3
Rance, M.4
Skelton, N.J.5
-
23
-
-
22144489530
-
Inferential structure determination
-
Rieping W, Habeck M, Nilges M (2005) Inferential structure determination. Science 309:303-306.
-
(2005)
Science
, vol.309
, pp. 303-306
-
-
Rieping, W.1
Habeck, M.2
Nilges, M.3
-
24
-
-
0025367860
-
Time-averaged nuclear Overhauser effect distance restraints applied to tendamistat
-
Torda AE, Scheek RM, van Gunsteren WF (1990) Time-averaged nuclear Overhauser effect distance restraints applied to tendamistat. J Mol Biol 214:223-235.
-
(1990)
J Mol Biol
, vol.214
, pp. 223-235
-
-
Torda, A.E.1
Scheek, R.M.2
Van Gunsteren, W.F.3
-
25
-
-
33846532929
-
The MUMO (minimal under-restraining minimal over-restraining) method for the determination of native state ensembles of proteins
-
Richter B, Gsponer J, Varnai P, Salvatella X, Vendruscolo M (2007) The MUMO (minimal under-restraining minimal over-restraining) method for the determination of native state ensembles of proteins. J Biomol NMR 37:117-135.
-
(2007)
J Biomol NMR
, vol.37
, pp. 117-135
-
-
Richter, B.1
Gsponer, J.2
Varnai, P.3
Salvatella, X.4
Vendruscolo, M.5
-
26
-
-
0029022355
-
Conformational variability of solution nuclear magnetic resonance structures
-
Bonvin AM, Brunger AT (1995) Conformational variability of solution nuclear magnetic resonance structures. J Mol Biol 250:80-93.
-
(1995)
J Mol Biol
, vol.250
, pp. 80-93
-
-
Bonvin, A.M.1
Brunger, A.T.2
-
27
-
-
79960078022
-
Incorporation of evolutionary information into Rosetta comparative modeling
-
Thompson J, Baker D (2011) Incorporation of evolutionary information into Rosetta comparative modeling. Proteins 79:2380-2388.
-
(2011)
Proteins
, vol.79
, pp. 2380-2388
-
-
Thompson, J.1
Baker, D.2
-
28
-
-
0027136282
-
Comparative protein modelling by satisfaction of spatial restraints
-
Sali A, Blundell TL (1993) Comparative protein modelling by satisfaction of spatial restraints. J Mol Biol 234:779-815.
-
(1993)
J Mol Biol
, vol.234
, pp. 779-815
-
-
Sali, A.1
Blundell, T.L.2
-
29
-
-
33748441391
-
A general method for the unbiased improvement of solution NMR structures by the use of related X-ray data, the AUREMOL-ISIC algorithm
-
Brunner K, Gronwald W, Trenner JM, Neidig KP, Kalbitzer HR (2006) A general method for the unbiased improvement of solution NMR structures by the use of related X-ray data, the AUREMOL-ISIC algorithm. BMC Struct Biol 6:14.
-
(2006)
BMC Struct Biol
, vol.6
, pp. 14
-
-
Brunner, K.1
Gronwald, W.2
Trenner, J.M.3
Neidig, K.P.4
Kalbitzer, H.R.5
-
30
-
-
24944493938
-
Toward high-resolution de novo structure prediction for small proteins
-
Bradley P, Misura KM, Baker D (2005) Toward high-resolution de novo structure prediction for small proteins. Science 309:1868-1871.
-
(2005)
Science
, vol.309
, pp. 1868-1871
-
-
Bradley, P.1
Misura, K.M.2
Baker, D.3
-
31
-
-
0032396395
-
Homology modeling of an RNP domain from a human RNA-binding protein: Homology-constrained energy optimization provides a criterion for distinguishing potential sequence alignments
-
Sahasrabudhe PV, Tejero R, Kitao S, Furuichi Y, Montelione GT (1998) Homology modeling of an RNP domain from a human RNA-binding protein: Homology-constrained energy optimization provides a criterion for distinguishing potential sequence alignments. Proteins 33:558-566.
-
(1998)
Proteins
, vol.33
, pp. 558-566
-
-
Sahasrabudhe, P.V.1
Tejero, R.2
Kitao, S.3
Furuichi, Y.4
Montelione, G.T.5
-
32
-
-
34447508216
-
Phaser crystallographic software
-
McCoy AJ, et al. (2007) Phaser crystallographic software. J Appl Crystallogr 40:658-674.
-
(2007)
J Appl Crystallogr
, vol.40
, pp. 658-674
-
-
McCoy, A.J.1
-
33
-
-
35448929112
-
A large data set comparison of protein structures determined by crystallography and NMR: Statistical test for structural differences and the effect of crystal packing
-
Andrec M, et al. (2007) A large data set comparison of protein structures determined by crystallography and NMR: statistical test for structural differences and the effect of crystal packing. Proteins 69:449-465.
-
(2007)
Proteins
, vol.69
, pp. 449-465
-
-
Andrec, M.1
-
34
-
-
13644252170
-
Protein NMR recall, precision, and F-measure scores (RPF scores): Structure quality assessment measures based on information retrieval statistics
-
Huang YJ, Powers R, Montelione GT (2005) Protein NMR recall, precision, and F-measure scores (RPF scores): structure quality assessment measures based on information retrieval statistics. J Am Chem Soc 127:1665-1674.
-
(2005)
J Am Chem Soc
, vol.127
, pp. 1665-1674
-
-
Huang, Y.J.1
Powers, R.2
Montelione, G.T.3
-
35
-
-
48849113878
-
Comparative protein structure modeling using MODELLER
-
Chap 2:Unit 2 9; 10.1002/0471140864.ps0209s50
-
Eswar N, et al. (2007) Comparative protein structure modeling using MODELLER. Curr Protoc Protein Sci, Chap 2:Unit 2 9; 10.1002/0471140864. ps0209s50.
-
(2007)
Curr Protoc Protein Sci
-
-
Eswar, N.1
-
36
-
-
19444387760
-
The 1.9 A structure of a proteasome-11S activator complex and implications for proteasome-PAN/PA700 interactions
-
Forster A, Masters EI, Whitby FG, Robinson H, Hill CP (2005) The 1.9 A structure of a proteasome-11S activator complex and implications for proteasome-PAN/PA700 interactions. Mol Cell 18:589-599.
-
(2005)
Mol Cell
, vol.18
, pp. 589-599
-
-
Forster, A.1
Masters, E.I.2
Whitby, F.G.3
Robinson, H.4
Hill, C.P.5
-
37
-
-
17644392830
-
TM-align: A protein structure alignment algorithm based on the TM-score
-
Zhang Y, Skolnick J (2005) TM-align: a protein structure alignment algorithm based on the TM-score. Nucleic Acids Res 33:2302-2309.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 2302-2309
-
-
Zhang, Y.1
Skolnick, J.2
|