메뉴 건너뛰기




Volumn 52, Issue 6, 2012, Pages 381-385

Trehalose-enhanced isolation of neuronal sub-types from adult mouse brain

Author keywords

FACS; Nano CAGE; Parvalbumin; Pyramidal; RNA seq

Indexed keywords

TRANSCRIPTOME; TREHALOSE;

EID: 84862163088     PISSN: 07366205     EISSN: 19409818     Source Type: Journal    
DOI: 10.2144/0000113878     Document Type: Article
Times cited : (62)

References (40)
  • 1
    • 12344336772 scopus 로고    scopus 로고
    • Progress in realizing the promise of microarrays in systems neurobiology
    • Dougherty, J.D. and D.H. Geschwind. 2005. Progress in realizing the promise of microarrays in systems neurobiology. Neuron 45:183-185.
    • (2005) Neuron , vol.45 , pp. 183-185
    • Dougherty, J.D.1    Geschwind, D.H.2
  • 2
    • 79959317018 scopus 로고    scopus 로고
    • Whole transcriptome analysis: What are we still missing?
    • Saxena, A. and P. Carninci. 2011. Whole transcriptome analysis: what are we still missing? Wiley Interdiscip Rev Syst Biol Med 3:527-543.
    • (2011) Wiley Interdiscip Rev Syst Biol Med , vol.3 , pp. 527-543
    • Saxena, A.1    Carninci, P.2
  • 3
    • 0033634813 scopus 로고    scopus 로고
    • Imaging neuronal subsets in transgenic mice expressing multiple spectral variants of GFP
    • Feng, G., et al. 2000. Imaging neuronal subsets in transgenic mice expressing multiple spectral variants of GFP. Neuron 28:41-51.
    • (2000) Neuron , vol.28 , pp. 41-51
    • Feng, G.1
  • 4
    • 0037104767 scopus 로고    scopus 로고
    • In vivo labeling of parvalbumin-positive interneurons and analysis of electrical coupling in identified neurons
    • Meyer, A.H., et al. 2002. In vivo labeling of parvalbumin-positive interneurons and analysis of electrical coupling in identified neurons. J. Neurosci. 22:7055-7064.
    • (2002) J. Neurosci , vol.22 , pp. 7055-7064
    • Meyer, A.H.1
  • 5
    • 48649111174 scopus 로고    scopus 로고
    • Embryonic stem cell-derived Pitx3-enhanced green fluorescent protein midbrain dopamine neurons survive enrichment by fluorescence-activated cell sorting and function in an animal model of Parkinson's disease
    • Hedlund, E., et al. 2008. Embryonic stem cell-derived Pitx3-enhanced green fluorescent protein midbrain dopamine neurons survive enrichment by fluorescence-activated cell sorting and function in an animal model of Parkinson's disease. Stem Cells 26:1526-1536.
    • (2008) Stem Cells , vol.26 , pp. 1526-1536
    • Hedlund, E.1
  • 6
    • 73349101833 scopus 로고    scopus 로고
    • Embryonic stem cells with GFP knocked into the dopamine transporter yield purified dopamine neurons in vitro and from knock-in mice
    • Zhou, W., et al. 2009. Embryonic stem cells with GFP knocked into the dopamine transporter yield purified dopamine neurons in vitro and from knock-in mice. Stem Cells 27:2952-2961.
    • (2009) Stem Cells , vol.27 , pp. 2952-2961
    • Zhou, W.1
  • 7
    • 34548354885 scopus 로고    scopus 로고
    • Laser capture microdissection and microarray analysis of dividing neural progenitor cells from the adult rat hippocampus
    • Gurok, U., et al. 2007. Laser capture microdissection and microarray analysis of dividing neural progenitor cells from the adult rat hippocampus. Eur. J. Neurosci. 26:1079-1090.
    • (2007) Eur. J. Neurosci , vol.26 , pp. 1079-1090
    • Gurok, U.1
  • 8
    • 42649100011 scopus 로고    scopus 로고
    • Gene expression analysis of in vivo fluorescent cells
    • Khodosevich, K., et al. 2007. Gene expression analysis of in vivo fluorescent cells. PLoS One 2:e1151.
    • (2007) PLoS One , vol.2
    • Khodosevich, K.1
  • 9
    • 39149103759 scopus 로고    scopus 로고
    • A manual method for the purification of fluorescently labeled neurons from the mammalian brain
    • Hempel, C.M., K. Sugino, and S.B. Nelson. 2007. A manual method for the purification of fluorescently labeled neurons from the mammalian brain. Nat. Protocols 2:2924-2929.
    • (2007) Nat. Protocols , vol.2 , pp. 2924-2929
    • Hempel, C.M.1    Sugino, K.2    Nelson, S.B.3
  • 10
    • 29444452573 scopus 로고    scopus 로고
    • Molecular taxonomy of major neuronal classes in the adult mouse forebrain
    • Sugino, K., et al. 2006. Molecular taxonomy of major neuronal classes in the adult mouse forebrain. Nat. Neurosci. 9:99-107.
    • (2006) Nat. Neurosci , vol.9 , pp. 99-107
    • Sugino, K.1
  • 11
    • 0035425314 scopus 로고    scopus 로고
    • Direct isolation of committed neuronal progenitor cells from transgenic mice coexpressing spectrally distinct fluorescent proteins regulated by stage-specific neural promoters
    • Sawamoto, K., et al. 2001. Direct isolation of committed neuronal progenitor cells from transgenic mice coexpressing spectrally distinct fluorescent proteins regulated by stage-specific neural promoters. J. Neurosci. Res. 65:220-227.
    • (2001) J. Neurosci. Res , vol.65 , pp. 220-227
    • Sawamoto, K.1
  • 12
    • 0037106210 scopus 로고    scopus 로고
    • Flow cytometric analysis of neural stem cells in the developing and adult mouse brain
    • Murayama, A., et al. 2002. Flow cytometric analysis of neural stem cells in the developing and adult mouse brain. J. Neurosci. Res. 69:837-847.
    • (2002) J. Neurosci. Res , vol.69 , pp. 837-847
    • Murayama, A.1
  • 13
    • 0035899505 scopus 로고    scopus 로고
    • Purification of a pluripotent neural stem cell from the adult mouse brain
    • Rietze, R.L., et al. 2001. Purification of a pluripotent neural stem cell from the adult mouse brain. Nature 412:736-739.
    • (2001) Nature , vol.412 , pp. 736-739
    • Rietze, R.L.1
  • 14
    • 65549112127 scopus 로고    scopus 로고
    • Simultaneous prospective purification of adult subventricular zone neural stem cells and their progeny
    • Pastrana, E., L.C. Cheng, and F. Doetsch. 2009. Simultaneous prospective purification of adult subventricular zone neural stem cells and their progeny. Proc. Natl. Acad. Sci. USA 106:6387-6392.
    • (2009) Proc. Natl. Acad. Sci. USA , vol.106 , pp. 6387-6392
    • Pastrana, E.1    Cheng, L.C.2    Doetsch, F.3
  • 15
    • 74949130457 scopus 로고    scopus 로고
    • Distinct transcriptomes define rostral and caudal serotonin neurons
    • Wylie, C.J., et al. 2010. Distinct transcriptomes define rostral and caudal serotonin neurons. J. Neurosci. 30:670-684.
    • (2010) J. Neurosci , vol.30 , pp. 670-684
    • Wylie, C.J.1
  • 16
    • 12344252023 scopus 로고    scopus 로고
    • Neuronal subtype-specific genes that control corticospinal motor neuron development in vivo
    • Arlotta, P., et al. 2005. Neuronal subtype-specific genes that control corticospinal motor neuron development in vivo. Neuron 45:207-221.
    • (2005) Neuron , vol.45 , pp. 207-221
    • Arlotta, P.1
  • 17
    • 79952747189 scopus 로고    scopus 로고
    • FACS identifies unique cocaine-induced gene regulation in selectively activated adult striatal neurons
    • Guez-Barber, D., et al. 2011. FACS identifies unique cocaine-induced gene regulation in selectively activated adult striatal neurons. J. Neurosci. 31:4251-4259.
    • (2011) J. Neurosci , vol.31 , pp. 4251-4259
    • Guez-Barber, D.1
  • 18
    • 81555204354 scopus 로고    scopus 로고
    • FACS purification of immunolabeled cell types from adult rat brain
    • Guez-Barber, D., et al. 2012. FACS purification of immunolabeled cell types from adult rat brain. J. Neurosci. Methods 203:10-18.
    • (2012) J. Neurosci. Methods , vol.203 , pp. 10-18
    • Guez-Barber, D.1
  • 19
    • 33344470365 scopus 로고    scopus 로고
    • FACS-array profiling of striatal projection neuron subtypes in juvenile and adult mouse brains
    • Lobo, M.K., et al. 2006. FACS-array profiling of striatal projection neuron subtypes in juvenile and adult mouse brains. Nat. Neurosci. 9:443-452.
    • (2006) Nat. Neurosci , vol.9 , pp. 443-452
    • Lobo, M.K.1
  • 20
    • 34250718676 scopus 로고    scopus 로고
    • Isolation and culture of adult neurons and neurospheres
    • Brewer, G.J. and J.R. Torricelli. 2007. Isolation and culture of adult neurons and neurospheres. Nat. Protocols 2:1490-1498.
    • (2007) Nat. Protocols , vol.2 , pp. 1490-1498
    • Brewer, G.J.1    Torricelli, J.R.2
  • 21
    • 0033951109 scopus 로고    scopus 로고
    • Intracellular trehalose improves the survival of cryopreserved mammalian cells
    • Eroglu, A., et al. 2000. Intracellular trehalose improves the survival of cryopreserved mammalian cells. Nat. Biotechnol. 18:163-167.
    • (2000) Nat. Biotechnol , vol.18 , pp. 163-167
    • Eroglu, A.1
  • 22
    • 0031905770 scopus 로고    scopus 로고
    • Thermostabilization and thermoactivation of thermolabile enzymes by trehalose and its application for the synthesis of full length cDNA
    • Carninci, P., et al. 1998. Thermostabilization and thermoactivation of thermolabile enzymes by trehalose and its application for the synthesis of full length cDNA. Proc. Natl. Acad. Sci. USA 95:520-524.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 520-524
    • Carninci, P.1
  • 23
    • 0036667446 scopus 로고    scopus 로고
    • Protective role of trehalose during severe oxidative stress caused by hydrogen peroxide and the adaptive oxidative stress response in Candida albicans
    • Alvarez-Peral, F.J., et al. 2002. Protective role of trehalose during severe oxidative stress caused by hydrogen peroxide and the adaptive oxidative stress response in Candida albicans. Microbiology 148:2599-2606.
    • (2002) Microbiology , vol.148 , pp. 2599-2606
    • Alvarez-Peral, F.J.1
  • 24
    • 79961241631 scopus 로고    scopus 로고
    • Trehalose renders the dauer larva of Caenorhabditis elegans resistant to extreme desiccation
    • Erkut, C., et al. 2011. Trehalose renders the dauer larva of Caenorhabditis elegans resistant to extreme desiccation. Curr. Biol. 21:1331-1336.
    • (2011) Curr. Biol , vol.21 , pp. 1331-1336
    • Erkut, C.1
  • 25
    • 2942530843 scopus 로고    scopus 로고
    • Cryopreservation of stem cells using trehalose: Evaluation of the method using a human hematopoietic cell line
    • Buchanan, S.S., et al. 2004. Cryopreservation of stem cells using trehalose: evaluation of the method using a human hematopoietic cell line. Stem Cells Dev. 13:295-305.
    • (2004) Stem Cells Dev , vol.13 , pp. 295-305
    • Buchanan, S.S.1
  • 26
    • 0036628347 scopus 로고    scopus 로고
    • Cryopreservation of fetal skin is improved by extracellular trehalose
    • Erdag, G., et al. 2002. Cryopreservation of fetal skin is improved by extracellular trehalose. Cryobiology 44:218-228.
    • (2002) Cryobiology , vol.44 , pp. 218-228
    • Erdag, G.1
  • 27
    • 34247161367 scopus 로고    scopus 로고
    • Trehalose, a novel mTOR-independent autophagy enhancer, accelerates the clearance of mutant huntingtin and alpha-synuclein
    • Sarkar, S., et al. 2007. Trehalose, a novel mTOR-independent autophagy enhancer, accelerates the clearance of mutant huntingtin and alpha-synuclein. J. Biol. Chem. 282:5641-5652.
    • (2007) J. Biol. Chem , vol.282 , pp. 5641-5652
    • Sarkar, S.1
  • 28
    • 0030802225 scopus 로고    scopus 로고
    • Barotolerance is dependent on both trehalose and heat shock protein 104 but is essentially different from thermotolerance in Saccharomyces cerevisiae
    • Iwahashi, H., et al. 1997. Barotolerance is dependent on both trehalose and heat shock protein 104 but is essentially different from thermotolerance in Saccharomyces cerevisiae. Lett. Appl. Microbiol. 25:43-47.
    • (1997) Lett. Appl. Microbiol , vol.25 , pp. 43-47
    • Iwahashi, H.1
  • 29
    • 56049125731 scopus 로고    scopus 로고
    • Effect of trehalose on a phospholipid membrane under mechanical stress
    • Pereira, C.S. and P.H. Hunenberger. 2008. Effect of trehalose on a phospholipid membrane under mechanical stress. Biophys. J. 95:3525-3534.
    • (2008) Biophys. J , vol.95 , pp. 3525-3534
    • Pereira, C.S.1    Hunenberger, P.H.2
  • 30
    • 51549083402 scopus 로고    scopus 로고
    • A resource for transcriptomic analysis in the mouse brain
    • Plessy, C., et al. 2008. A resource for transcriptomic analysis in the mouse brain. PLoS One 3:e3012.
    • (2008) PLoS One , vol.3
    • Plessy, C.1
  • 31
    • 77954738647 scopus 로고    scopus 로고
    • Linking promoters to functional transcripts in small samples with nanoCAGE and CAGEscan
    • Plessy, C., et al. 2010. Linking promoters to functional transcripts in small samples with nanoCAGE and CAGEscan. Nat. Methods 7:528-534.
    • (2010) Nat. Methods , vol.7 , pp. 528-534
    • Plessy, C.1
  • 32
    • 78651437467 scopus 로고    scopus 로고
    • NanoCAGE: A High-Resolution Technique to Discover and Interrogate Cell Transcriptomes
    • Salimullah, M., et al. NanoCAGE: A High-Resolution Technique to Discover and Interrogate Cell Transcriptomes. Cold Spring Harb Protoc, 2010. 2011: p5559.
    • (2011) Cold Spring Harb Protoc , vol.2010 , pp. 5559
    • Salimullah, M.1
  • 33
    • 78751618193 scopus 로고    scopus 로고
    • Highly consistent, fully representative mRNA-Seq libraries from ten nanograms of total RNA
    • Sengupta, S., et al. 2010. Highly consistent, fully representative mRNA-Seq libraries from ten nanograms of total RNA. BioTechniques 49:898-904.
    • (2010) BioTechniques , vol.49 , pp. 898-904
    • Sengupta, S.1
  • 34
    • 67349146589 scopus 로고    scopus 로고
    • MRNA-Seq whole-transcriptome analysis of a single cell
    • Tang, F., et al. 2009. MRNA-Seq whole-transcriptome analysis of a single cell. Nat. Methods 6:377-382.
    • (2009) Nat. Methods , vol.6 , pp. 377-382
    • Tang, F.1
  • 35
    • 34047153948 scopus 로고    scopus 로고
    • The gene expression profiling in murine cortical cells undergoing programmed cell death (PCD) induced by serum deprivation
    • Yang, M.H., et al. 2007. The gene expression profiling in murine cortical cells undergoing programmed cell death (PCD) induced by serum deprivation. J. Biochem. Mol. Biol. 40:277-285.
    • (2007) J. Biochem. Mol. Biol , vol.40 , pp. 277-285
    • Yang, M.H.1
  • 36
    • 0038054341 scopus 로고    scopus 로고
    • PGC-1alpha-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes
    • Mootha, V.K., et al. 2003. PGC-1alpha-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes. Nat. Genet. 34:267-273.
    • (2003) Nat. Genet , vol.34 , pp. 267-273
    • Mootha, V.K.1
  • 37
    • 27344435774 scopus 로고    scopus 로고
    • Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
    • Subramanian, A., et al. 2005. Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles. Proc. Natl. Acad. Sci. USA 102:15545-15550.
    • (2005) Proc. Natl. Acad. Sci. USA , vol.102 , pp. 15545-15550
    • Subramanian, A.1
  • 38
    • 65549139891 scopus 로고    scopus 로고
    • Axonal mRNA in uninjured and regenerating cortical mammalian axons
    • Taylor, A.M., et al. 2009. Axonal mRNA in uninjured and regenerating cortical mammalian axons. J. Neurosci. 29:4697-4707.
    • (2009) J. Neurosci , vol.29 , pp. 4697-4707
    • Taylor, A.M.1
  • 39
    • 0038702458 scopus 로고    scopus 로고
    • Single-cell transcriptional analysis of neuronal progenitors
    • Tietjen, I., et al. 2003. Single-cell transcriptional analysis of neuronal progenitors. Neuron. 38(2):161-75.
    • (2003) Neuron , vol.38 , Issue.2 , pp. 161-175
    • Tietjen, I.1
  • 40
    • 11144357484 scopus 로고    scopus 로고
    • Gene discovery in genetically labeled single dopaminergic neurons of the retina
    • Gustincich, S., et al. 2004. Gene discovery in genetically labeled single dopaminergic neurons of the retina. Proc. Natl. Acad. Sci. U S A. 101(14):5069-5074.
    • (2004) Proc. Natl. Acad. Sci. U S A , vol.101 , Issue.14 , pp. 5069-5074
    • Gustincich, S.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.