메뉴 건너뛰기




Volumn 12, Issue 6, 2012, Pages 1213-1221

Comparative genome analysis of two Cryptosporidium parvum isolates with different host range

Author keywords

ABC transporters; Cryptosporidium hominis; Cryptosporidium parvum; Genome; Kb; Nt; Single nucleotide polymorphism; SNP

Indexed keywords

ABC TRANSPORTER; SIGNAL PEPTIDE;

EID: 84861936064     PISSN: 15671348     EISSN: 15677257     Source Type: Journal    
DOI: 10.1016/j.meegid.2012.03.027     Document Type: Article
Times cited : (66)

References (37)
  • 2
    • 0037378917 scopus 로고    scopus 로고
    • Characterization of Cryptosporidium meleagridis of human origin passaged through different host species
    • Akiyoshi D.E., Dilo J., Pearson C., Chapman S., Tumwine J., Tzipori S. Characterization of Cryptosporidium meleagridis of human origin passaged through different host species. Infect. Immun. 2003, 71:1828-1832.
    • (2003) Infect. Immun. , vol.71 , pp. 1828-1832
    • Akiyoshi, D.E.1    Dilo, J.2    Pearson, C.3    Chapman, S.4    Tumwine, J.5    Tzipori, S.6
  • 5
    • 78149437703 scopus 로고    scopus 로고
    • Non-synonymous and synonymous coding SNPs show similar likelihood and effect size of human disease association
    • Chen R., Davydov E.V., Sirota M., Butte A.J. Non-synonymous and synonymous coding SNPs show similar likelihood and effect size of human disease association. PLoS One 2010, 5:e13574.
    • (2010) PLoS One , vol.5
    • Chen, R.1    Davydov, E.V.2    Sirota, M.3    Butte, A.J.4
  • 7
    • 22244486069 scopus 로고    scopus 로고
    • Cryptosporidium bovis n. sp. (Apicomplexa: Cryptosporidiidae) in cattle (Bos taurus)
    • Fayer R., Santin M., Xiao L. Cryptosporidium bovis n. sp. (Apicomplexa: Cryptosporidiidae) in cattle (Bos taurus). J. Parasitol. 2005, 91:624-629.
    • (2005) J. Parasitol. , vol.91 , pp. 624-629
    • Fayer, R.1    Santin, M.2    Xiao, L.3
  • 8
    • 77955334679 scopus 로고    scopus 로고
    • Cryptosporidium ubiquitum n. sp. in animals and humans
    • Fayer R., Santin M., Macarisin D. Cryptosporidium ubiquitum n. sp. in animals and humans. Vet. Parasitol. 2010, 172:23-32.
    • (2010) Vet. Parasitol. , vol.172 , pp. 23-32
    • Fayer, R.1    Santin, M.2    Macarisin, D.3
  • 9
    • 0000732090 scopus 로고
    • Evolution of protein molecules
    • Academic Press, New York, H.N. Munro (Ed.)
    • Jukes T.H., Cantor C.R. Evolution of protein molecules. Mammalian Protein Metabolism 1969, Academic Press, New York. H.N. Munro (Ed.).
    • (1969) Mammalian Protein Metabolism
    • Jukes, T.H.1    Cantor, C.R.2
  • 11
    • 0036277268 scopus 로고    scopus 로고
    • Characterisation of a novel transporter from Cryptosporidium parvum
    • LaGier M.J., Keithly J.S., Zhu G. Characterisation of a novel transporter from Cryptosporidium parvum. Int. J. Parasitol. 2002, 32:877-887.
    • (2002) Int. J. Parasitol. , vol.32 , pp. 877-887
    • LaGier, M.J.1    Keithly, J.S.2    Zhu, G.3
  • 12
    • 0020600327 scopus 로고
    • Three-step stool examination for cryptosporidiosis in 10 homosexual men with protracted watery diarrhea
    • Ma P., Soave R. Three-step stool examination for cryptosporidiosis in 10 homosexual men with protracted watery diarrhea. J. Infect. Dis. 1983, 147:824-828.
    • (1983) J. Infect. Dis. , vol.147 , pp. 824-828
    • Ma, P.1    Soave, R.2
  • 13
    • 0141605224 scopus 로고    scopus 로고
    • Multilocus genotyping of Cryptosporidium parvum type 2: population genetics and sub-structuring
    • Mallon M.E., MacLeod A., Wastling J.M., Smith H., Tait A. Multilocus genotyping of Cryptosporidium parvum type 2: population genetics and sub-structuring. Infect. Genet. Evol. 2003, 3:207-218.
    • (2003) Infect. Genet. Evol. , vol.3 , pp. 207-218
    • Mallon, M.E.1    MacLeod, A.2    Wastling, J.M.3    Smith, H.4    Tait, A.5
  • 17
    • 0022507362 scopus 로고
    • Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions
    • Nei M., Gojobori T. Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Mol. Biol. Evol. 1986, 3:418-426.
    • (1986) Mol. Biol. Evol. , vol.3 , pp. 418-426
    • Nei, M.1    Gojobori, T.2
  • 18
    • 0036203391 scopus 로고    scopus 로고
    • Cryptosporidium virulence determinants - are we there yet?
    • Okhuysen P.C., Chappell C.L. Cryptosporidium virulence determinants - are we there yet?. Int. J. Parasitol. 2002, 32:517-525.
    • (2002) Int. J. Parasitol. , vol.32 , pp. 517-525
    • Okhuysen, P.C.1    Chappell, C.L.2
  • 19
    • 0030609938 scopus 로고    scopus 로고
    • Characterization of an ATP-binding cassette transporter in Cryptosporidium parvum
    • Perkins M.E., Volkman S., Wirth D.F., Le Blancq S.M. Characterization of an ATP-binding cassette transporter in Cryptosporidium parvum. Mol. Biochem. Parasitol. 1997, 87:117-122.
    • (1997) Mol. Biochem. Parasitol. , vol.87 , pp. 117-122
    • Perkins, M.E.1    Volkman, S.2    Wirth, D.F.3    Le Blancq, S.M.4
  • 20
    • 0346801872 scopus 로고    scopus 로고
    • CryptoDB: the cryptosporidium genome resource. Nucleic Acids Res. 32 Database issue, D329-D331.
    • Puiu, D., Enomoto, S., Buck, G.A., Abrahamsen, M.S., Kissinger, J.C., 2004. CryptoDB: the cryptosporidium genome resource. Nucleic Acids Res. 32 Database issue, D329-D331.
    • (2004)
    • Puiu, D.1    Enomoto, S.2    Buck, G.A.3    Abrahamsen, M.S.4    Kissinger, J.C.5
  • 21
    • 70349111526 scopus 로고    scopus 로고
    • Intronic regulatory elements determine the divergent expression patterns of AGAMOUS-LIKE6 subfamily members in Arabidopsis
    • Schauer S.E., Schluter P.M., Baskar R., Gheyselinck J., Bolanos A., Curtis M.D., Grossniklaus U. Intronic regulatory elements determine the divergent expression patterns of AGAMOUS-LIKE6 subfamily members in Arabidopsis. Plant J. 2009, 59:987-1000.
    • (2009) Plant J. , vol.59 , pp. 987-1000
    • Schauer, S.E.1    Schluter, P.M.2    Baskar, R.3    Gheyselinck, J.4    Bolanos, A.5    Curtis, M.D.6    Grossniklaus, U.7
  • 24
    • 0033946226 scopus 로고    scopus 로고
    • Cloning and sequence analysis of a highly polymorphic Cryptosporidium parvum gene encoding a 60-kilodalton glycoprotein and characterization of its 15- and 45-kilodalton zoite surface antigen products
    • Strong W.B., Gut J., Nelson R.G. Cloning and sequence analysis of a highly polymorphic Cryptosporidium parvum gene encoding a 60-kilodalton glycoprotein and characterization of its 15- and 45-kilodalton zoite surface antigen products. Infect. Immun. 2000, 68:4117-4134.
    • (2000) Infect. Immun. , vol.68 , pp. 4117-4134
    • Strong, W.B.1    Gut, J.2    Nelson, R.G.3
  • 26
    • 0027157960 scopus 로고
    • Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees
    • Tamura K., Nei M. Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Mol. Biol. Evol. 1993, 10:512-526.
    • (1993) Mol. Biol. Evol. , vol.10 , pp. 512-526
    • Tamura, K.1    Nei, M.2
  • 27
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0
    • Tamura K., Dudley J., Nei M., Kumar S. MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol. Biol. Evol. 2007, 24:1596-1599.
    • (2007) Mol. Biol. Evol. , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 28
    • 33344470606 scopus 로고    scopus 로고
    • Differential evolution of repetitive sequences in Cryptosporidium parvum and Cryptosporidium hominis
    • Tanriverdi S., Widmer G. Differential evolution of repetitive sequences in Cryptosporidium parvum and Cryptosporidium hominis. Infect. Genet. Evol. 2006, 6:113-122.
    • (2006) Infect. Genet. Evol. , vol.6 , pp. 113-122
    • Tanriverdi, S.1    Widmer, G.2
  • 29
    • 33846996816 scopus 로고    scopus 로고
    • Genetic crosses in the apicomplexan parasite Cryptosporidium parvum define recombination parameters
    • Tanriverdi S., Blain J.C., Deng B., Ferdig M.T., Widmer G. Genetic crosses in the apicomplexan parasite Cryptosporidium parvum define recombination parameters. Mol. Microbiol. 2007, 63:1432-1439.
    • (2007) Mol. Microbiol. , vol.63 , pp. 1432-1439
    • Tanriverdi, S.1    Blain, J.C.2    Deng, B.3    Ferdig, M.T.4    Widmer, G.5
  • 31
    • 33847301575 scopus 로고    scopus 로고
    • Molecular basis of Cryptosporidium-host cell interactions: recent advances and future prospects
    • Wanyiri J., Ward H. Molecular basis of Cryptosporidium-host cell interactions: recent advances and future prospects. Future Microbiol. 2006, 1:201-208.
    • (2006) Future Microbiol. , vol.1 , pp. 201-208
    • Wanyiri, J.1    Ward, H.2
  • 32
    • 70449698245 scopus 로고    scopus 로고
    • Meta-analysis of a polymorphic surface glycoprotein of the parasitic protozoa Cryptosporidium parvum and Cryptosporidium hominis
    • Widmer G. Meta-analysis of a polymorphic surface glycoprotein of the parasitic protozoa Cryptosporidium parvum and Cryptosporidium hominis. Epidemiol. Infect. 2009, 137:1800-1808.
    • (2009) Epidemiol. Infect. , vol.137 , pp. 1800-1808
    • Widmer, G.1
  • 33
    • 78049306663 scopus 로고    scopus 로고
    • Comparison of single- and multilocus genetic diversity in the protozoan parasites Cryptosporidium parvum and C. hominis
    • Widmer G., Lee Y. Comparison of single- and multilocus genetic diversity in the protozoan parasites Cryptosporidium parvum and C. hominis. Appl. Environ. Microbiol. 2010, 76:6639-6644.
    • (2010) Appl. Environ. Microbiol. , vol.76 , pp. 6639-6644
    • Widmer, G.1    Lee, Y.2
  • 34
    • 0031654575 scopus 로고    scopus 로고
    • Genotypic and phenotypic characterization of Cryptosporidium parvum isolates from people with AIDS
    • Widmer G., Tzipori S., Fichtenbaum C.J., Griffiths J.K. Genotypic and phenotypic characterization of Cryptosporidium parvum isolates from people with AIDS. J. Infect. Dis. 1998, 178:834-840.
    • (1998) J. Infect. Dis. , vol.178 , pp. 834-840
    • Widmer, G.1    Tzipori, S.2    Fichtenbaum, C.J.3    Griffiths, J.K.4
  • 35
    • 77955375616 scopus 로고    scopus 로고
    • Nonlinear dynamics of nonsynonymous (d(N)) and synonymous (d(S)) substitution rates affects inference of selection
    • Wolf J.B.W., Kunstner A., Nam K., Jakobsson M., Ellegren H. Nonlinear dynamics of nonsynonymous (d(N)) and synonymous (d(S)) substitution rates affects inference of selection. Genome Biol. Evol. 2009, 1:308-319.
    • (2009) Genome Biol. Evol. , vol.1 , pp. 308-319
    • Wolf, J.B.W.1    Kunstner, A.2    Nam, K.3    Jakobsson, M.4    Ellegren, H.5
  • 37
    • 0033979433 scopus 로고    scopus 로고
    • Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models
    • Yang Z., Nielsen R. Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models. Mol. Biol. Evol. 2000, 17:32-43.
    • (2000) Mol. Biol. Evol. , vol.17 , pp. 32-43
    • Yang, Z.1    Nielsen, R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.