-
1
-
-
0028068714
-
Facilitated binding of TATA-binding protein to nucleosomal DNA
-
Imbalzano A.N., Kwon H., Green M.R., Kingston R.E. Facilitated binding of TATA-binding protein to nucleosomal DNA. Nature 1994, 370:481-485.
-
(1994)
Nature
, vol.370
, pp. 481-485
-
-
Imbalzano, A.N.1
Kwon, H.2
Green, M.R.3
Kingston, R.E.4
-
2
-
-
0025239781
-
Nucleosome positioning modulates accessibility of regulatory proteins to the mouse mammary tumor virus promoter
-
Pina B., Bruggemeier U., Beato M. Nucleosome positioning modulates accessibility of regulatory proteins to the mouse mammary tumor virus promoter. Cell 1990, 60:719-731.
-
(1990)
Cell
, vol.60
, pp. 719-731
-
-
Pina, B.1
Bruggemeier, U.2
Beato, M.3
-
3
-
-
1542328277
-
Anatomy of a hypersensitive site
-
Reinke H., Horz W. Anatomy of a hypersensitive site. Biochim. Biophys. Acta 2004, 1677:24-29.
-
(2004)
Biochim. Biophys. Acta
, vol.1677
, pp. 24-29
-
-
Reinke, H.1
Horz, W.2
-
4
-
-
2942574467
-
Removal of promoter nucleosomes by disassembly rather than sliding in vivo
-
Boeger H., Griesenbeck J., Strattan J.S., Kornberg R.D. Removal of promoter nucleosomes by disassembly rather than sliding in vivo. Mol. Cell 2004, 14:667-673.
-
(2004)
Mol. Cell
, vol.14
, pp. 667-673
-
-
Boeger, H.1
Griesenbeck, J.2
Strattan, J.S.3
Kornberg, R.D.4
-
5
-
-
0038094502
-
Histones are first hyperacetylated and then lose contact with the activated PHO5 promoter
-
Reinke H., Horz W. Histones are first hyperacetylated and then lose contact with the activated PHO5 promoter. Mol. Cell 2003, 11:1599-1607.
-
(2003)
Mol. Cell
, vol.11
, pp. 1599-1607
-
-
Reinke, H.1
Horz, W.2
-
6
-
-
34548717647
-
Chromatin disassembly from the PHO5 promoter is essential for the recruitment of the general transcription machinery and coactivators
-
Adkins M.W., Williams S.K., Linger J., Tyler J.K. Chromatin disassembly from the PHO5 promoter is essential for the recruitment of the general transcription machinery and coactivators. Mol. Cell. Biol. 2007, 27:6372-6382.
-
(2007)
Mol. Cell. Biol.
, vol.27
, pp. 6372-6382
-
-
Adkins, M.W.1
Williams, S.K.2
Linger, J.3
Tyler, J.K.4
-
7
-
-
0019303186
-
The 5' ends of Drosophila heat shock genes in chromatin are hypersensitive to DNase I
-
Wu C. The 5' ends of Drosophila heat shock genes in chromatin are hypersensitive to DNase I. Nature 1980, 286:854-860.
-
(1980)
Nature
, vol.286
, pp. 854-860
-
-
Wu, C.1
-
8
-
-
0019401409
-
DNase I hypersensitive sites in Drosophila chromatin occur at the 5' ends of regions of transcription
-
Keene M.A., Corces V., Lowenhaupt K., Elgin S.C. DNase I hypersensitive sites in Drosophila chromatin occur at the 5' ends of regions of transcription. Proc. Natl. Acad. Sci. U. S. A. 1981, 78:143-146.
-
(1981)
Proc. Natl. Acad. Sci. U. S. A.
, vol.78
, pp. 143-146
-
-
Keene, M.A.1
Corces, V.2
Lowenhaupt, K.3
Elgin, S.C.4
-
9
-
-
0021271338
-
Chromatin structure of hsp 70 genes, activated by heat shock: selective removal of histones from the coding region and their absence from the 5' region
-
Karpov V.L., Preobrazhenskaya O.V., Mirzabekov A.D. Chromatin structure of hsp 70 genes, activated by heat shock: selective removal of histones from the coding region and their absence from the 5' region. Cell 1984, 36:423-431.
-
(1984)
Cell
, vol.36
, pp. 423-431
-
-
Karpov, V.L.1
Preobrazhenskaya, O.V.2
Mirzabekov, A.D.3
-
10
-
-
0024282827
-
The RNA polymerase II molecule at the 5' end of the uninduced hsp70 gene of D. melanogaster is transcriptionally engaged
-
Rougvie A.E., Lis J.T. The RNA polymerase II molecule at the 5' end of the uninduced hsp70 gene of D. melanogaster is transcriptionally engaged. Cell 1988, 54:795-804.
-
(1988)
Cell
, vol.54
, pp. 795-804
-
-
Rougvie, A.E.1
Lis, J.T.2
-
11
-
-
0022817308
-
RNA polymerase II interacts with the promoter region of the noninduced hsp70 gene in Drosophila melanogaster cells
-
Gilmour D.S., Lis J.T. RNA polymerase II interacts with the promoter region of the noninduced hsp70 gene in Drosophila melanogaster cells. Mol. Cell. Biol. 1986, 6:3984-3989.
-
(1986)
Mol. Cell. Biol.
, vol.6
, pp. 3984-3989
-
-
Gilmour, D.S.1
Lis, J.T.2
-
12
-
-
0032459466
-
Promoter-associated pausing in promoter architecture and postinitiation transcriptional regulation
-
Lis J. Promoter-associated pausing in promoter architecture and postinitiation transcriptional regulation. Cold Spring Harb. Symp. Quant. Biol. 1998, 63:347-356.
-
(1998)
Cold Spring Harb. Symp. Quant. Biol.
, vol.63
, pp. 347-356
-
-
Lis, J.1
-
13
-
-
36549061004
-
RNA polymerase is poised for activation across the genome
-
Muse G.W., Gilchrist D.A., Nechaev S., Shah R., Parker J.S., Grissom S.F., Zeitlinger J., Adelman K. RNA polymerase is poised for activation across the genome. Nat. Genet. 2007, 39:1507-1511.
-
(2007)
Nat. Genet.
, vol.39
, pp. 1507-1511
-
-
Muse, G.W.1
Gilchrist, D.A.2
Nechaev, S.3
Shah, R.4
Parker, J.S.5
Grissom, S.F.6
Zeitlinger, J.7
Adelman, K.8
-
14
-
-
36549013619
-
RNA polymerase stalling at developmental control genes in the Drosophila melanogaster embryo
-
Zeitlinger J., Stark A., Kellis M., Hong J.W., Nechaev S., Adelman K., Levine M., Young R.A. RNA polymerase stalling at developmental control genes in the Drosophila melanogaster embryo. Nat. Genet. 2007, 39:1512-1516.
-
(2007)
Nat. Genet.
, vol.39
, pp. 1512-1516
-
-
Zeitlinger, J.1
Stark, A.2
Kellis, M.3
Hong, J.W.4
Nechaev, S.5
Adelman, K.6
Levine, M.7
Young, R.A.8
-
15
-
-
57849109058
-
Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters
-
Core L.J., Waterfall J.J., Lis J.T. Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters. Science 2008, 322:1845-1848.
-
(2008)
Science
, vol.322
, pp. 1845-1848
-
-
Core, L.J.1
Waterfall, J.J.2
Lis, J.T.3
-
16
-
-
74549132843
-
Global analysis of short RNAs reveals widespread promoter-proximal stalling and arrest of Pol II in Drosophila
-
Nechaev S., Fargo D.C., Dos Santos G., Liu L., Gao Y., Adelman K. Global analysis of short RNAs reveals widespread promoter-proximal stalling and arrest of Pol II in Drosophila. Science 2010, 327:335-338.
-
(2010)
Science
, vol.327
, pp. 335-338
-
-
Nechaev, S.1
Fargo, D.C.2
Dos Santos, G.3
Liu, L.4
Gao, Y.5
Adelman, K.6
-
17
-
-
77951920690
-
C-Myc regulates transcriptional pause release
-
Rahl P.B., Lin C.Y., Seila A.C., Flynn R.A., McCuine S., Burge C.B., Sharp P.A., Young R.A. c-Myc regulates transcriptional pause release. Cell 2010, 141:432-445.
-
(2010)
Cell
, vol.141
, pp. 432-445
-
-
Rahl, P.B.1
Lin, C.Y.2
Seila, A.C.3
Flynn, R.A.4
McCuine, S.5
Burge, C.B.6
Sharp, P.A.7
Young, R.A.8
-
18
-
-
45549093494
-
Promoter elements associated with RNA Pol II stalling in the Drosophila embryo
-
Hendrix D.A., Hong J.W., Zeitlinger J., Rokhsar D.S., Levine M.S. Promoter elements associated with RNA Pol II stalling in the Drosophila embryo. Proc. Natl. Acad. Sci. U. S. A. 2008, 105:7762-7767.
-
(2008)
Proc. Natl. Acad. Sci. U. S. A.
, vol.105
, pp. 7762-7767
-
-
Hendrix, D.A.1
Hong, J.W.2
Zeitlinger, J.3
Rokhsar, D.S.4
Levine, M.S.5
-
19
-
-
78149477660
-
Pausing of RNA polymerase II disrupts DNA-specified nucleosome organization to enable precise gene regulation
-
Gilchrist D.A., Dos Santos G., Fargo D.C., Xie B., Gao Y., Li L., Adelman K. Pausing of RNA polymerase II disrupts DNA-specified nucleosome organization to enable precise gene regulation. Cell 2010, 143:540-551.
-
(2010)
Cell
, vol.143
, pp. 540-551
-
-
Gilchrist, D.A.1
Dos Santos, G.2
Fargo, D.C.3
Xie, B.4
Gao, Y.5
Li, L.6
Adelman, K.7
-
20
-
-
79954562232
-
Regulating RNA polymerase pausing and transcription elongation in embryonic stem cells
-
Min I.M., Waterfall J.J., Core L.J., Munroe R.J., Schimenti J., Lis J.T. Regulating RNA polymerase pausing and transcription elongation in embryonic stem cells. Genes Dev. 2011, 25:742-754.
-
(2011)
Genes Dev.
, vol.25
, pp. 742-754
-
-
Min, I.M.1
Waterfall, J.J.2
Core, L.J.3
Munroe, R.J.4
Schimenti, J.5
Lis, J.T.6
-
21
-
-
47549090254
-
NELF-mediated stalling of Pol II can enhance gene expression by blocking promoter-proximal nucleosome assembly
-
Gilchrist D.A., Nechaev S., Lee C., Ghosh S.K., Collins J.B., Li L., Gilmour D.S., Adelman K. NELF-mediated stalling of Pol II can enhance gene expression by blocking promoter-proximal nucleosome assembly. Genes Dev. 2008, 22:1921-1933.
-
(2008)
Genes Dev.
, vol.22
, pp. 1921-1933
-
-
Gilchrist, D.A.1
Nechaev, S.2
Lee, C.3
Ghosh, S.K.4
Collins, J.B.5
Li, L.6
Gilmour, D.S.7
Adelman, K.8
-
22
-
-
0028055116
-
ATP-dependent nucleosome disruption at a heat-shock promoter mediated by binding of GAGA transcription factor
-
Tsukiyama T., Becker P.B., Wu C. ATP-dependent nucleosome disruption at a heat-shock promoter mediated by binding of GAGA transcription factor. Nature 1994, 367:525-532.
-
(1994)
Nature
, vol.367
, pp. 525-532
-
-
Tsukiyama, T.1
Becker, P.B.2
Wu, C.3
-
23
-
-
0029562736
-
Purification and properties of an ATP-dependent nucleosome remodeling factor
-
Tsukiyama T., Wu C. Purification and properties of an ATP-dependent nucleosome remodeling factor. Cell 1995, 83:1011-1020.
-
(1995)
Cell
, vol.83
, pp. 1011-1020
-
-
Tsukiyama, T.1
Wu, C.2
-
24
-
-
43249086572
-
NELF and GAGA factor are linked to promoter-proximal pausing at many genes in Drosophila
-
Lee C., Li X., Hechmer A., Eisen M., Biggin M.D., Venters B.J., Jiang C., Li J., Pugh B.F., Gilmour D.S. NELF and GAGA factor are linked to promoter-proximal pausing at many genes in Drosophila. Mol. Cell. Biol. 2008, 28:3290-3300.
-
(2008)
Mol. Cell. Biol.
, vol.28
, pp. 3290-3300
-
-
Lee, C.1
Li, X.2
Hechmer, A.3
Eisen, M.4
Biggin, M.D.5
Venters, B.J.6
Jiang, C.7
Li, J.8
Pugh, B.F.9
Gilmour, D.S.10
-
25
-
-
0031306557
-
Role of nucleosome remodeling factor NURF in transcriptional activation of chromatin
-
Mizuguchi G., Tsukiyama T., Wisniewski J., Wu C. Role of nucleosome remodeling factor NURF in transcriptional activation of chromatin. Mol. Cell 1997, 1:141-150.
-
(1997)
Mol. Cell
, vol.1
, pp. 141-150
-
-
Mizuguchi, G.1
Tsukiyama, T.2
Wisniewski, J.3
Wu, C.4
-
26
-
-
0033583290
-
Structure and function of the human transcription elongation factor DSIF
-
Yamaguchi Y., Wada T., Watanabe D., Takagi T., Hasegawa J., Handa H. Structure and function of the human transcription elongation factor DSIF. J. Biol. Chem. 1999, 274:8085-8092.
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 8085-8092
-
-
Yamaguchi, Y.1
Wada, T.2
Watanabe, D.3
Takagi, T.4
Hasegawa, J.5
Handa, H.6
-
27
-
-
34047111213
-
Translational and rotational settings of H2A.Z nucleosomes across the Saccharomyces cerevisiae genome
-
Albert I., Mavrich T.N., Tomsho L.P., Qi J., Zanton S.J., Schuster S.C., Pugh B.F. Translational and rotational settings of H2A.Z nucleosomes across the Saccharomyces cerevisiae genome. Nature 2007, 446:572-576.
-
(2007)
Nature
, vol.446
, pp. 572-576
-
-
Albert, I.1
Mavrich, T.N.2
Tomsho, L.P.3
Qi, J.4
Zanton, S.J.5
Schuster, S.C.6
Pugh, B.F.7
-
28
-
-
39749145198
-
Dynamic regulation of nucleosome positioning in the human genome
-
Schones D.E., Cui K., Cuddapah S., Roh T.Y., Barski A., Wang Z., Wei G., Zhao K. Dynamic regulation of nucleosome positioning in the human genome. Cell 2008, 132:887-898.
-
(2008)
Cell
, vol.132
, pp. 887-898
-
-
Schones, D.E.1
Cui, K.2
Cuddapah, S.3
Roh, T.Y.4
Barski, A.5
Wang, Z.6
Wei, G.7
Zhao, K.8
-
29
-
-
43749099875
-
Nucleosome organization in the Drosophila genome
-
Mavrich T.N., Jiang C., Ioshikhes I.P., Li X., Venters B.J., Zanton S.J., Tomsho L.P., Qi J., Glaser R.L., Schuster S.C., Gilmour D.S., Albert I., Pugh B.F. Nucleosome organization in the Drosophila genome. Nature 2008, 453:358-362.
-
(2008)
Nature
, vol.453
, pp. 358-362
-
-
Mavrich, T.N.1
Jiang, C.2
Ioshikhes, I.P.3
Li, X.4
Venters, B.J.5
Zanton, S.J.6
Tomsho, L.P.7
Qi, J.8
Glaser, R.L.9
Schuster, S.C.10
Gilmour, D.S.11
Albert, I.12
Pugh, B.F.13
-
30
-
-
79959557189
-
Determinants of nucleosome organization in primary human cells
-
Valouev A., Johnson S.M., Boyd S.D., Smith C.L., Fire A.Z., Sidow A. Determinants of nucleosome organization in primary human cells. Nature 2011, 474:516-520.
-
(2011)
Nature
, vol.474
, pp. 516-520
-
-
Valouev, A.1
Johnson, S.M.2
Boyd, S.D.3
Smith, C.L.4
Fire, A.Z.5
Sidow, A.6
-
31
-
-
62649085538
-
The DNA-encoded nucleosome organization of a eukaryotic genome
-
Kaplan N., Moore I.K., Fondufe-Mittendorf Y., Gossett A.J., Tillo D., Field Y., LeProust E.M., Hughes T.R., Lieb J.D., Widom J., Segal E. The DNA-encoded nucleosome organization of a eukaryotic genome. Nature 2009, 458:362-366.
-
(2009)
Nature
, vol.458
, pp. 362-366
-
-
Kaplan, N.1
Moore, I.K.2
Fondufe-Mittendorf, Y.3
Gossett, A.J.4
Tillo, D.5
Field, Y.6
LeProust, E.M.7
Hughes, T.R.8
Lieb, J.D.9
Widom, J.10
Segal, E.11
-
32
-
-
68249142923
-
Intrinsic histone-DNA interactions are not the major determinant of nucleosome positions in vivo
-
Zhang Y., Moqtaderi Z., Rattner B.P., Euskirchen G., Snyder M., Kadonaga J.T., Liu X.S., Struhl K. Intrinsic histone-DNA interactions are not the major determinant of nucleosome positions in vivo. Nat. Struct. Mol. Biol. 2009, 16:847-852.
-
(2009)
Nat. Struct. Mol. Biol.
, vol.16
, pp. 847-852
-
-
Zhang, Y.1
Moqtaderi, Z.2
Rattner, B.P.3
Euskirchen, G.4
Snyder, M.5
Kadonaga, J.T.6
Liu, X.S.7
Struhl, K.8
-
33
-
-
77949393272
-
High nucleosome occupancy is encoded at human regulatory sequences
-
Tillo D., Kaplan N., Moore I.K., Fondufe-Mittendorf Y., Gossett A.J., Field Y., Lieb J.D., Widom J., Segal E., Hughes T.R. High nucleosome occupancy is encoded at human regulatory sequences. PLoS One 2010, 5:e9129.
-
(2010)
PLoS One
, vol.5
-
-
Tillo, D.1
Kaplan, N.2
Moore, I.K.3
Fondufe-Mittendorf, Y.4
Gossett, A.J.5
Field, Y.6
Lieb, J.D.7
Widom, J.8
Segal, E.9
Hughes, T.R.10
-
34
-
-
75149135277
-
G+C content dominates intrinsic nucleosome occupancy
-
Tillo D., Hughes T.R. G+C content dominates intrinsic nucleosome occupancy. BMC Bioinforma. 2009, 10:442.
-
(2009)
BMC Bioinforma.
, vol.10
, pp. 442
-
-
Tillo, D.1
Hughes, T.R.2
-
35
-
-
46449103738
-
A high-resolution, nucleosome position map of C. elegans reveals a lack of universal sequence-dictated positioning
-
Valouev A., Ichikawa J., Tonthat T., Stuart J., Ranade S., Peckham H., Zeng K., Malek J.A., Costa G., McKernan K., Sidow A., Fire A., Johnson S.M. A high-resolution, nucleosome position map of C. elegans reveals a lack of universal sequence-dictated positioning. Genome Res. 2008, 18:1051-1063.
-
(2008)
Genome Res.
, vol.18
, pp. 1051-1063
-
-
Valouev, A.1
Ichikawa, J.2
Tonthat, T.3
Stuart, J.4
Ranade, S.5
Peckham, H.6
Zeng, K.7
Malek, J.A.8
Costa, G.9
McKernan, K.10
Sidow, A.11
Fire, A.12
Johnson, S.M.13
-
36
-
-
74949110964
-
High-resolution nucleosome mapping reveals transcription-dependent promoter packaging
-
Weiner A., Hughes A., Yassour M., Rando O.J., Friedman N. High-resolution nucleosome mapping reveals transcription-dependent promoter packaging. Genome Res. 2010, 20:90-100.
-
(2010)
Genome Res.
, vol.20
, pp. 90-100
-
-
Weiner, A.1
Hughes, A.2
Yassour, M.3
Rando, O.J.4
Friedman, N.5
-
37
-
-
43749088127
-
Two strategies for gene regulation by promoter nucleosomes
-
Tirosh I., Barkai N. Two strategies for gene regulation by promoter nucleosomes. Genome Res. 2008, 18:1084-1091.
-
(2008)
Genome Res.
, vol.18
, pp. 1084-1091
-
-
Tirosh, I.1
Barkai, N.2
-
38
-
-
68149150830
-
H3.3/H2A.Z double variant-containing nucleosomes mark 'nucleosome-free regions' of active promoters and other regulatory regions
-
Jin C., Zang C., Wei G., Cui K., Peng W., Zhao K., Felsenfeld G. H3.3/H2A.Z double variant-containing nucleosomes mark 'nucleosome-free regions' of active promoters and other regulatory regions. Nat. Genet. 2009, 41:941-945.
-
(2009)
Nat. Genet.
, vol.41
, pp. 941-945
-
-
Jin, C.1
Zang, C.2
Wei, G.3
Cui, K.4
Peng, W.5
Zhao, K.6
Felsenfeld, G.7
-
39
-
-
79955583542
-
Mapping and analysis of chromatin state dynamics in nine human cell types
-
Ernst J., Kheradpour P., Mikkelsen T.S., Shoresh N., Ward L.D., Epstein C.B., Zhang X., Wang L., Issner R., Coyne M., Ku M., Durham T., Kellis M., Bernstein B.E. Mapping and analysis of chromatin state dynamics in nine human cell types. Nature 2011, 473:43-49.
-
(2011)
Nature
, vol.473
, pp. 43-49
-
-
Ernst, J.1
Kheradpour, P.2
Mikkelsen, T.S.3
Shoresh, N.4
Ward, L.D.5
Epstein, C.B.6
Zhang, X.7
Wang, L.8
Issner, R.9
Coyne, M.10
Ku, M.11
Durham, T.12
Kellis, M.13
Bernstein, B.E.14
-
40
-
-
0029026719
-
Poly(dA:dT), a ubiquitous promoter element that stimulates transcription via its intrinsic DNA structure
-
Iyer V., Struhl K. Poly(dA:dT), a ubiquitous promoter element that stimulates transcription via its intrinsic DNA structure. EMBO J. 1995, 14:2570-2579.
-
(1995)
EMBO J.
, vol.14
, pp. 2570-2579
-
-
Iyer, V.1
Struhl, K.2
-
41
-
-
67649669255
-
A unifying model for the selective regulation of inducible transcription by CpG islands and nucleosome remodeling
-
Ramirez-Carrozzi V.R., Braas D., Bhatt D.M., Cheng C.S., Hong C., Doty K.R., Black J.C., Hoffmann A., Carey M., Smale S.T. A unifying model for the selective regulation of inducible transcription by CpG islands and nucleosome remodeling. Cell 2009, 138:114-128.
-
(2009)
Cell
, vol.138
, pp. 114-128
-
-
Ramirez-Carrozzi, V.R.1
Braas, D.2
Bhatt, D.M.3
Cheng, C.S.4
Hong, C.5
Doty, K.R.6
Black, J.C.7
Hoffmann, A.8
Carey, M.9
Smale, S.T.10
-
42
-
-
40549111302
-
All and only CpG containing sequences are enriched in promoters abundantly bound by RNA polymerase II in multiple tissues
-
Rozenberg J.M., Shlyakhtenko A., Glass K., Rishi V., Myakishev M.V., FitzGerald P.C., Vinson C. All and only CpG containing sequences are enriched in promoters abundantly bound by RNA polymerase II in multiple tissues. BMC Genomics 2008, 9:67.
-
(2008)
BMC Genomics
, vol.9
, pp. 67
-
-
Rozenberg, J.M.1
Shlyakhtenko, A.2
Glass, K.3
Rishi, V.4
Myakishev, M.V.5
FitzGerald, P.C.6
Vinson, C.7
-
43
-
-
46149108345
-
Rapid, transcription-independent loss of nucleosomes over a large chromatin domain at Hsp70 loci
-
Petesch S.J., Lis J.T. Rapid, transcription-independent loss of nucleosomes over a large chromatin domain at Hsp70 loci. Cell 2008, 134:74-84.
-
(2008)
Cell
, vol.134
, pp. 74-84
-
-
Petesch, S.J.1
Lis, J.T.2
-
44
-
-
0032519352
-
Nucleosomes are not necessary for promoter-proximal pausing in vitro on the Drosophila hsp70 promoter
-
Benjamin L.R., Gilmour D.S. Nucleosomes are not necessary for promoter-proximal pausing in vitro on the Drosophila hsp70 promoter. Nucleic Acids Res. 1998, 26:1051-1055.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 1051-1055
-
-
Benjamin, L.R.1
Gilmour, D.S.2
-
45
-
-
70350013550
-
Biased chromatin signatures around polyadenylation sites and exons
-
Spies N., Nielsen C.B., Padgett R.A., Burge C.B. Biased chromatin signatures around polyadenylation sites and exons. Molecular cell 2009, 36:245-254.
-
(2009)
Molecular cell
, vol.36
, pp. 245-254
-
-
Spies, N.1
Nielsen, C.B.2
Padgett, R.A.3
Burge, C.B.4
-
46
-
-
69949124307
-
Nucleosome positioning as a determinant of exon recognition
-
Tilgner H., Nikolaou C., Althammer S., Sammeth M., Beato M., Valcarcel J., Guigo R. Nucleosome positioning as a determinant of exon recognition. Nat. Struct. Mol. Biol. 2009, 16:996-1001.
-
(2009)
Nat. Struct. Mol. Biol.
, vol.16
, pp. 996-1001
-
-
Tilgner, H.1
Nikolaou, C.2
Althammer, S.3
Sammeth, M.4
Beato, M.5
Valcarcel, J.6
Guigo, R.7
-
47
-
-
70349333201
-
Nucleosomes are well positioned in exons and carry characteristic histone modifications
-
Andersson R., Enroth S., Rada-Iglesias A., Wadelius C., Komorowski J. Nucleosomes are well positioned in exons and carry characteristic histone modifications. Genome Res. 2009, 19:1732-1741.
-
(2009)
Genome Res.
, vol.19
, pp. 1732-1741
-
-
Andersson, R.1
Enroth, S.2
Rada-Iglesias, A.3
Wadelius, C.4
Komorowski, J.5
-
49
-
-
34047262671
-
Transcriptional regulation by chromatin disassembly and reassembly
-
Williams S.K., Tyler J.K. Transcriptional regulation by chromatin disassembly and reassembly. Curr. Opin. Genet. Dev. 2007, 17:88-93.
-
(2007)
Curr. Opin. Genet. Dev.
, vol.17
, pp. 88-93
-
-
Williams, S.K.1
Tyler, J.K.2
-
50
-
-
77957776228
-
Systematic protein location mapping reveals five principal chromatin types in Drosophila cells
-
Filion G.J., van Bemmel J.G., Braunschweig U., Talhout W., Kind J., Ward L.D., Brugman W., de Castro I.J., Kerkhoven R.M., Bussemaker H.J., van Steensel B. Systematic protein location mapping reveals five principal chromatin types in Drosophila cells. Cell 2010, 143:212-224.
-
(2010)
Cell
, vol.143
, pp. 212-224
-
-
Filion, G.J.1
van Bemmel, J.G.2
Braunschweig, U.3
Talhout, W.4
Kind, J.5
Ward, L.D.6
Brugman, W.7
de Castro, I.J.8
Kerkhoven, R.M.9
Bussemaker, H.J.10
van Steensel, B.11
-
51
-
-
79953060951
-
Comprehensive analysis of the chromatin landscape in Drosophila melanogaster
-
Kharchenko P.V., Alekseyenko A.A., Schwartz Y.B., Minoda A., Riddle N.C., Ernst J., Sabo P.J., Larschan E., Gorchakov A.A., Gu T., Linder-Basso D., Plachetka A., Shanower G., Tolstorukov M.Y., Luquette L.J., Xi R., Jung Y.L., Park R.W., Bishop E.P., Canfield T.K., Sandstrom R., Thurman R.E., MacAlpine D.M., Stamatoyannopoulos J.A., Kellis M., Elgin S.C., Kuroda M.I., Pirrotta V., Karpen G.H., Park P.J. Comprehensive analysis of the chromatin landscape in Drosophila melanogaster. Nature 2011, 471:480-485.
-
(2011)
Nature
, vol.471
, pp. 480-485
-
-
Kharchenko, P.V.1
Alekseyenko, A.A.2
Schwartz, Y.B.3
Minoda, A.4
Riddle, N.C.5
Ernst, J.6
Sabo, P.J.7
Larschan, E.8
Gorchakov, A.A.9
Gu, T.10
Linder-Basso, D.11
Plachetka, A.12
Shanower, G.13
Tolstorukov, M.Y.14
Luquette, L.J.15
Xi, R.16
Jung, Y.L.17
Park, R.W.18
Bishop, E.P.19
Canfield, T.K.20
Sandstrom, R.21
Thurman, R.E.22
MacAlpine, D.M.23
Stamatoyannopoulos, J.A.24
Kellis, M.25
Elgin, S.C.26
Kuroda, M.I.27
Pirrotta, V.28
Karpen, G.H.29
Park, P.J.30
more..
-
52
-
-
67649292737
-
Unlocking the secrets of the genome
-
Celniker S.E., Dillon L.A., Gerstein M.B., Gunsalus K.C., Henikoff S., Karpen G.H., Kellis M., Lai E.C., Lieb J.D., MacAlpine D.M., Micklem G., Piano F., Snyder M., Stein L., White K.P., Waterston R.H. Unlocking the secrets of the genome. Nature 2009, 459:927-930.
-
(2009)
Nature
, vol.459
, pp. 927-930
-
-
Celniker, S.E.1
Dillon, L.A.2
Gerstein, M.B.3
Gunsalus, K.C.4
Henikoff, S.5
Karpen, G.H.6
Kellis, M.7
Lai, E.C.8
Lieb, J.D.9
MacAlpine, D.M.10
Micklem, G.11
Piano, F.12
Snyder, M.13
Stein, L.14
White, K.P.15
Waterston, R.H.16
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