메뉴 건너뛰기




Volumn 157, Issue 1, 2012, Pages 6-15

Intraspecific variations of Dekkera/Brettanomyces bruxellensis genome studied by capillary electrophoresis separation of the intron splice site profiles

Author keywords

Capillary electrophoresis separation; Intron splice site; Wine spoilage; Yeast typing

Indexed keywords

ARTICLE; BRETTANOMYCES; BRETTANOMYCES BRUXELLENSIS; CAPILLARY ELECTROPHORESIS; DEKKERA; FUNGAL GENOME; GENE SEQUENCE; GENOME; INTRASPECIFIC VARIATION; INTRON; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION;

EID: 84861745275     PISSN: 01681605     EISSN: 18793460     Source Type: Journal    
DOI: 10.1016/j.ijfoodmicro.2012.02.017     Document Type: Article
Times cited : (37)

References (34)
  • 2
    • 0029167994 scopus 로고
    • Rearrangement of snRNA structure during assembly and function of the spliceosome
    • Ares M., Weiser B. Rearrangement of snRNA structure during assembly and function of the spliceosome. Progress in Nucleic Acid Research and Molecular Biology 1995, 50:131-159.
    • (1995) Progress in Nucleic Acid Research and Molecular Biology , vol.50 , pp. 131-159
    • Ares, M.1    Weiser, B.2
  • 5
    • 0034733873 scopus 로고    scopus 로고
    • Mitochondrial DNA restriction enzyme analysis and evaluation of the enological characteristics of Saccharomyces cerevisiae strain isolated from grapes of the wine-producing area of Collio (Italy)
    • Comi G., Maifreni M., Manzano M., Lagazio C., Cocolin L. Mitochondrial DNA restriction enzyme analysis and evaluation of the enological characteristics of Saccharomyces cerevisiae strain isolated from grapes of the wine-producing area of Collio (Italy). International Journal of Food Microbiology 2000, 58:117-121.
    • (2000) International Journal of Food Microbiology , vol.58 , pp. 117-121
    • Comi, G.1    Maifreni, M.2    Manzano, M.3    Lagazio, C.4    Cocolin, L.5
  • 10
    • 0000250265 scopus 로고
    • Measurement of the amount of ecological association between species
    • Dice L.R. Measurement of the amount of ecological association between species. Ecology 1945, 26:295-302.
    • (1945) Ecology , vol.26 , pp. 295-302
    • Dice, L.R.1
  • 11
  • 12
    • 73349121287 scopus 로고    scopus 로고
    • A distinct population of Saccharomyces cerevisiae in New Zealand: evidence for local dispersal by insects and human-aided global dispersal in oak barrels
    • Goddard M.R., Anfang N., Tang R.Y., Gardner R.C., Jun C. A distinct population of Saccharomyces cerevisiae in New Zealand: evidence for local dispersal by insects and human-aided global dispersal in oak barrels. Environmental Microbiology 2010, 12:63-73.
    • (2010) Environmental Microbiology , vol.12 , pp. 63-73
    • Goddard, M.R.1    Anfang, N.2    Tang, R.Y.3    Gardner, R.C.4    Jun, C.5
  • 13
    • 72449150687 scopus 로고    scopus 로고
    • Complex nature of the genome in a wine spoilage yeast Dekkera bruxellensis
    • Hellborg L., Piškur J. Complex nature of the genome in a wine spoilage yeast Dekkera bruxellensis. Eukaryotic Cell 2009, 8:1739-1749.
    • (2009) Eukaryotic Cell , vol.8 , pp. 1739-1749
    • Hellborg, L.1    Piškur, J.2
  • 16
    • 64449087288 scopus 로고    scopus 로고
    • Molecular identification of Brettanomyces bruxellensis strains isolated from red wines and volatile phenol production
    • Oelofse A., Lonvaud-Funel A., du Toit M. Molecular identification of Brettanomyces bruxellensis strains isolated from red wines and volatile phenol production. Food Microbiology 2009, 26:377-385.
    • (2009) Food Microbiology , vol.26 , pp. 377-385
    • Oelofse, A.1    Lonvaud-Funel, A.2    du Toit, M.3
  • 17
    • 77954478011 scopus 로고    scopus 로고
    • Mitochondrial genome from the facultative anaerobe and petite-positive yeast Dekkera bruxellensis contains the NADH dehydrogenase subunit genes
    • Procházka E., Poláková S., Piškur J., Sulo P. Mitochondrial genome from the facultative anaerobe and petite-positive yeast Dekkera bruxellensis contains the NADH dehydrogenase subunit genes. FEMS Yeast Research 2010, 10:545-557.
    • (2010) FEMS Yeast Research , vol.10 , pp. 545-557
    • Procházka, E.1    Poláková, S.2    Piškur, J.3    Sulo, P.4
  • 19
    • 0026786810 scopus 로고
    • A comparative study of different methods of yeast strains characterization
    • Querol A., Barrio E., Ramón D. A comparative study of different methods of yeast strains characterization. Systematic and Applied Microbiology 1992, 15:439-446.
    • (1992) Systematic and Applied Microbiology , vol.15 , pp. 439-446
    • Querol, A.1    Barrio, E.2    Ramón, D.3
  • 20
    • 69249213727 scopus 로고    scopus 로고
    • A database of microsatellite genotypes for Saccharomyces cerevisiae
    • Richards K.D., Goddard M.R., Gardner R.C. A database of microsatellite genotypes for Saccharomyces cerevisiae. Antonie Van Leeuwenhoek 2009, 96:355-359.
    • (2009) Antonie Van Leeuwenhoek , vol.96 , pp. 355-359
    • Richards, K.D.1    Goddard, M.R.2    Gardner, R.C.3
  • 25
    • 33847698971 scopus 로고    scopus 로고
    • The relationship between non-protein-coding DNA and eukaryotic complexity
    • Taft R.J., Pheasant M., Mattick J.S. The relationship between non-protein-coding DNA and eukaryotic complexity. BioEssays 2007, 29:288-299.
    • (2007) BioEssays , vol.29 , pp. 288-299
    • Taft, R.J.1    Pheasant, M.2    Mattick, J.S.3
  • 26
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura K., Peterson D., Peterson N., Stecher G., Nei M., Kumar S. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution 2011, 28:2731-2739.
    • (2011) Molecular Biology and Evolution , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 27
    • 0029031713 scopus 로고
    • Extensive interactions of PRP8 protein with the 5' and 3' splice sites during splicing suggest a role in stabilization of exon alignment by U5 snRNA
    • Teigelkamp S., Newman A.J., Beggs J.D. Extensive interactions of PRP8 protein with the 5' and 3' splice sites during splicing suggest a role in stabilization of exon alignment by U5 snRNA. The EMBO Journal 1995, 14:2602-2612.
    • (1995) The EMBO Journal , vol.14 , pp. 2602-2612
    • Teigelkamp, S.1    Newman, A.J.2    Beggs, J.D.3
  • 29
    • 46749145764 scopus 로고    scopus 로고
    • The immediate environment during postnatal development has long-term impact on gut community structure in pigs
    • Thompson C.L., Wang B., Holmes A.J. The immediate environment during postnatal development has long-term impact on gut community structure in pigs. The ISME Journal 2008, 2:739-748.
    • (2008) The ISME Journal , vol.2 , pp. 739-748
    • Thompson, C.L.1    Wang, B.2    Holmes, A.J.3
  • 30
    • 68949161819 scopus 로고    scopus 로고
    • An optimized protocol for the production of interdelta markers in Saccharomyces cerevisiae by using capillary electrophoresis
    • Tristezza M., Gerardi C., Logrieco A., Grieco F. An optimized protocol for the production of interdelta markers in Saccharomyces cerevisiae by using capillary electrophoresis. Journal of Microbiological Methods 2009, 78:286-291.
    • (2009) Journal of Microbiological Methods , vol.78 , pp. 286-291
    • Tristezza, M.1    Gerardi, C.2    Logrieco, A.3    Grieco, F.4
  • 32
    • 79952003044 scopus 로고    scopus 로고
    • Intron splice site PCR analysis as a tool to discriminate Dekkera bruxellensis strains
    • Vigentini I., Picozzi C., Roberto F. Intron splice site PCR analysis as a tool to discriminate Dekkera bruxellensis strains. Annals of Microbiology 2011, 61:153-157.
    • (2011) Annals of Microbiology , vol.61 , pp. 153-157
    • Vigentini, I.1    Picozzi, C.2    Roberto, F.3
  • 33
    • 34247874564 scopus 로고    scopus 로고
    • Genome survey sequencing of the wine spoilage yeast Dekkera (Brettanomyces) bruxellensis
    • Woolfit M., Rozpedowska E., Piškur J., Wolfe K.H. Genome survey sequencing of the wine spoilage yeast Dekkera (Brettanomyces) bruxellensis. Eukaryotic Cell 2007, 6:721-733.
    • (2007) Eukaryotic Cell , vol.6 , pp. 721-733
    • Woolfit, M.1    Rozpedowska, E.2    Piškur, J.3    Wolfe, K.H.4
  • 34
    • 0003215717 scopus 로고    scopus 로고
    • WinBoot: a program for performing bootstrap analysis of binary data to determine the confidence limits of UPGMA-based dendrograms
    • Int. Rice Res. Inst, Manila, Philippines
    • Yap I.V., Nelson R.J. WinBoot: a program for performing bootstrap analysis of binary data to determine the confidence limits of UPGMA-based dendrograms. IRRI Disc. Ser. 1996, 14. Int. Rice Res. Inst, Manila, Philippines.
    • (1996) IRRI Disc. Ser. , vol.14
    • Yap, I.V.1    Nelson, R.J.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.