-
1
-
-
35848942616
-
Microbial metabolism of reduced phosphorus compounds
-
White, A. K. and Metcalf, W. W. (2007) Microbial metabolism of reduced phosphorus compounds Annu. Rev. Microbiol. 61, 379-400
-
(2007)
Annu. Rev. Microbiol.
, vol.61
, pp. 379-400
-
-
White, A.K.1
Metcalf, W.W.2
-
2
-
-
0013844070
-
Bacterial oxidation of orthophosphate
-
Malacinski, G. and Konetzka, W. A. (1966) Bacterial oxidation of orthophosphate J. Bacteriol. 91, 578-582
-
(1966)
J. Bacteriol.
, vol.91
, pp. 578-582
-
-
Malacinski, G.1
Konetzka, W.A.2
-
3
-
-
0014097688
-
Orthophosphite-nicotinamide adenine dinucleotide oxidoreductase from Pseudomonas fluorescens
-
Malacinski, G. M. and Konetzka, W. A. (1967) Orthophosphite-nicotinamide adenine dinucleotide oxidoreductase from Pseudomonas fluorescens J. Bacteriol. 93, 1906-1910
-
(1967)
J. Bacteriol.
, vol.93
, pp. 1906-1910
-
-
Malacinski, G.M.1
Konetzka, W.A.2
-
4
-
-
0015952458
-
Bio-degradation and utilization of silica and quartz
-
Lauwers, A. M. and Heinen, W. (1974) Bio-degradation and utilization of silica and quartz Arch. Microbiol. 95, 67-78
-
(1974)
Arch. Microbiol.
, vol.95
, pp. 67-78
-
-
Lauwers, A.M.1
Heinen, W.2
-
5
-
-
0031740750
-
Molecular genetic analysis of phosphite and hypophosphite oxidation by Pseudomonas stutzeri WM88
-
Metcalf, W. W. and Wolfe, R. S. (1998) Molecular genetic analysis of phosphite and hypophosphite oxidation by Pseudomonas stutzeri WM88 J. Bacteriol. 180, 5547-5558
-
(1998)
J. Bacteriol.
, vol.180
, pp. 5547-5558
-
-
Metcalf, W.W.1
Wolfe, R.S.2
-
6
-
-
4344707142
-
The htx and ptx operons of Pseudomonas stutzeri WM88 are new members of the pho regulon
-
White, A. K. and Metcalf, W. W. (2004) The htx and ptx operons of Pseudomonas stutzeri WM88 are new members of the pho regulon J. Bacteriol. 186, 5876-5882
-
(2004)
J. Bacteriol.
, vol.186
, pp. 5876-5882
-
-
White, A.K.1
Metcalf, W.W.2
-
7
-
-
0037064062
-
Isolation and biochemical characterization of hypophosphite/2- oxoglutarate dioxygenase. A novel phosphorus-oxidizing enzyme from Psuedomonas stutzeri WM88
-
White, A. K. and Metcalf, W. W. (2002) Isolation and biochemical characterization of hypophosphite/2-oxoglutarate dioxygenase. A novel phosphorus-oxidizing enzyme from Psuedomonas stutzeri WM88 J. Biol. Chem. 277, 38262-38271
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 38262-38271
-
-
White, A.K.1
Metcalf, W.W.2
-
8
-
-
0035907326
-
Purification and characterization of a novel phosphorus-oxidizing enzyme from Pseudomonas stutzeri WM88
-
Costas, A. M., White, A. K., and Metcalf, W. W. (2001) Purification and characterization of a novel phosphorus-oxidizing enzyme from Pseudomonas stutzeri WM88 J. Biol. Chem. 276, 17429-17436
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 17429-17436
-
-
Costas, A.M.1
White, A.K.2
Metcalf, W.W.3
-
9
-
-
0024835757
-
A new family of 2-hydroxyacid dehydrogenases
-
Grant, G. A. (1989) A new family of 2-hydroxyacid dehydrogenases Biochem. Biophys. Res. Commun. 165, 1371-1374
-
(1989)
Biochem. Biophys. Res. Commun.
, vol.165
, pp. 1371-1374
-
-
Grant, G.A.1
-
11
-
-
0028278602
-
Crystal structure of a NAD-dependent d -glycerate dehydrogenase at 2.4 Å resolution
-
Goldberg, J. D., Yoshida, T., and Brick, P. (1994) Crystal structure of a NAD-dependent d -glycerate dehydrogenase at 2.4 Å resolution J. Mol. Biol. 236, 1123-1140
-
(1994)
J. Mol. Biol.
, vol.236
, pp. 1123-1140
-
-
Goldberg, J.D.1
Yoshida, T.2
Brick, P.3
-
12
-
-
0026536258
-
Crystal structure of NAD-dependent formate dehydrogenase
-
Lamzin, V. S., Aleshin, A. E., Strokopytov, B. V., Yukhnevich, M. G., Popov, V. O., Harutyunyan, E. H., and Wilson, K. S. (1992) Crystal structure of NAD-dependent formate dehydrogenase Eur. J. Biochem. 206, 441-452
-
(1992)
Eur. J. Biochem.
, vol.206
, pp. 441-452
-
-
Lamzin, V.S.1
Aleshin, A.E.2
Strokopytov, B.V.3
Yukhnevich, M.G.4
Popov, V.O.5
Harutyunyan, E.H.6
Wilson, K.S.7
-
13
-
-
0028206019
-
High resolution structures of holo and apo formate dehydrogenase
-
Lamzin, V. S., Dauter, Z., Popov, V. O., Harutyunyan, E. H., and Wilson, K. S. (1994) High resolution structures of holo and apo formate dehydrogenase J. Mol. Biol. 236, 759-785
-
(1994)
J. Mol. Biol.
, vol.236
, pp. 759-785
-
-
Lamzin, V.S.1
Dauter, Z.2
Popov, V.O.3
Harutyunyan, E.H.4
Wilson, K.S.5
-
15
-
-
15444368832
-
Mechanism and applications of phosphite dehydrogenase
-
Relyea, H. A. and van der Donk, W. A. (2005) Mechanism and applications of phosphite dehydrogenase Bioorg. Chem. 33, 171-189
-
(2005)
Bioorg. Chem.
, vol.33
, pp. 171-189
-
-
Relyea, H.A.1
Van Der Donk, W.A.2
-
16
-
-
15444368095
-
Site-directed mutagenesis of active site residues of phosphite dehydrogenase
-
Woodyer, R., Wheatley, J. L., Relyea, H. A., Rimkus, S., and van der Donk, W. A. (2005) Site-directed mutagenesis of active site residues of phosphite dehydrogenase Biochemistry 44, 4765-4774
-
(2005)
Biochemistry
, vol.44
, pp. 4765-4774
-
-
Woodyer, R.1
Wheatley, J.L.2
Relyea, H.A.3
Rimkus, S.4
Van Der Donk, W.A.5
-
17
-
-
15444369597
-
Inhibition and pH dependence of phosphite dehydrogenase
-
Relyea, H. A., Vrtis, J. M., Woodyer, R., Rimkus, S. A., and van der Donk, W. A. (2005) Inhibition and pH dependence of phosphite dehydrogenase Biochemistry 44, 6640-6649
-
(2005)
Biochemistry
, vol.44
, pp. 6640-6649
-
-
Relyea, H.A.1
Vrtis, J.M.2
Woodyer, R.3
Rimkus, S.A.4
Van Der Donk, W.A.5
-
18
-
-
0034827207
-
Phosphite dehydrogenase: An unusual phosphoryl transfer reaction
-
Vrtis, J. M., White, A. K., Metcalf, W. W., and van der Donk, W. A. (2001) Phosphite dehydrogenase: An unusual phosphoryl transfer reaction J. Am. Chem. Soc. 123, 2672-2673
-
(2001)
J. Am. Chem. Soc.
, vol.123
, pp. 2672-2673
-
-
Vrtis, J.M.1
White, A.K.2
Metcalf, W.W.3
Van Der Donk, W.A.4
-
19
-
-
0037008984
-
Phosphite dehydrogenase: A versatile cofactor-regeneration enzyme
-
Vrtis, J. M., White, A. K., Metcalf, W. W., and van der Donk, W. A. (2002) Phosphite dehydrogenase: A versatile cofactor-regeneration enzyme Angew. Chem., Int. Ed. 41, 3257-3259
-
(2002)
Angew. Chem., Int. Ed.
, vol.41
, pp. 3257-3259
-
-
Vrtis, J.M.1
White, A.K.2
Metcalf, W.W.3
Van Der Donk, W.A.4
-
20
-
-
0345817539
-
Regeneration of nicotinamide cofactors for use in organic synthesis
-
Chenault, H. K. and Whitesides, G. M. (1987) Regeneration of nicotinamide cofactors for use in organic synthesis Appl. Biochem. Biotechnol. 14, 147-197
-
(1987)
Appl. Biochem. Biotechnol.
, vol.14
, pp. 147-197
-
-
Chenault, H.K.1
Whitesides, G.M.2
-
21
-
-
0042933788
-
Recent developments in pyridine nucleotide regeneration
-
van der Donk, W. A. and Zhao, H. (2003) Recent developments in pyridine nucleotide regeneration Curr. Opin. Biotechnol. 14, 421-426
-
(2003)
Curr. Opin. Biotechnol.
, vol.14
, pp. 421-426
-
-
Van Der Donk, W.A.1
Zhao, H.2
-
22
-
-
0344687415
-
Regeneration of cofactors for use in biocatalysis
-
Zhao, H. and van der Donk, W. A. (2003) Regeneration of cofactors for use in biocatalysis Curr. Opin. Biotechnol. 14, 583-589
-
(2003)
Curr. Opin. Biotechnol.
, vol.14
, pp. 583-589
-
-
Zhao, H.1
Van Der Donk, W.A.2
-
23
-
-
33845964503
-
Efficient regeneration of NADPH using an engineered phosphite dehydrogenase
-
Johannes, T. W., Woodyer, R. D., and Zhao, H. (2007) Efficient regeneration of NADPH using an engineered phosphite dehydrogenase Biotechnol. Bioeng. 96, 18-26
-
(2007)
Biotechnol. Bioeng.
, vol.96
, pp. 18-26
-
-
Johannes, T.W.1
Woodyer, R.D.2
Zhao, H.3
-
24
-
-
33744496331
-
Optimizing a biocatalyst for improved NAD(P)H regeneration: Directed evolution of phosphite dehydrogenase
-
Woodyer, R., van der Donk, W. A., and Zhao, H. (2006) Optimizing a biocatalyst for improved NAD(P)H regeneration: Directed evolution of phosphite dehydrogenase Comb. Chem. High Throughput Screening 9, 237-245
-
(2006)
Comb. Chem. High Throughput Screening
, vol.9
, pp. 237-245
-
-
Woodyer, R.1
Van Der Donk, W.A.2
Zhao, H.3
-
25
-
-
0141954197
-
Relaxing the nicotinamide cofactor specificity of phosphite dehydrogenase by rational design
-
Woodyer, R., van der Donk, W. A., and Zhao, H. (2003) Relaxing the nicotinamide cofactor specificity of phosphite dehydrogenase by rational design Biochemistry 42, 11604-11614
-
(2003)
Biochemistry
, vol.42
, pp. 11604-11614
-
-
Woodyer, R.1
Van Der Donk, W.A.2
Zhao, H.3
-
26
-
-
26844523510
-
Directed evolution of a thermostable phosphite dehydrogenase for NAD(P)H regeneration
-
Johannes, T. W., Woodyer, R. D., and Zhao, H. (2005) Directed evolution of a thermostable phosphite dehydrogenase for NAD(P)H regeneration Appl. Environ. Microbiol. 71, 5728-5734
-
(2005)
Appl. Environ. Microbiol.
, vol.71
, pp. 5728-5734
-
-
Johannes, T.W.1
Woodyer, R.D.2
Zhao, H.3
-
27
-
-
36048953408
-
Pre-steady-state studies of phosphite dehydrogenase demonstrate that hydride transfer is fully rate limiting
-
Fogle, E. J. and van der Donk, W. A. (2007) Pre-steady-state studies of phosphite dehydrogenase demonstrate that hydride transfer is fully rate limiting Biochemistry 46, 13101-13108
-
(2007)
Biochemistry
, vol.46
, pp. 13101-13108
-
-
Fogle, E.J.1
Van Der Donk, W.A.2
-
28
-
-
0038414570
-
Multiparametric scaling of diffraction intensities
-
Otwinowski, Z., Borek, D., Majewski, W., and Minor, W. (2003) Multiparametric scaling of diffraction intensities Acta Crystallogr. A59, 228-234
-
(2003)
Acta Crystallogr.
, vol.59
, pp. 228-234
-
-
Otwinowski, Z.1
Borek, D.2
Majewski, W.3
Minor, W.4
-
29
-
-
0242460576
-
Generation, representation and flow of phase information in structure determination: Recent developments in and around SHARP 2.0
-
Bricogne, G., Vonrhein, C., Flensburg, C., Schiltz, M., and Paciorek, W. (2003) Generation, representation and flow of phase information in structure determination: Recent developments in and around SHARP 2.0 Acta Crystallogr. D59, 2023-2030
-
(2003)
Acta Crystallogr.
, vol.59
, pp. 2023-2030
-
-
Bricogne, G.1
Vonrhein, C.2
Flensburg, C.3
Schiltz, M.4
Paciorek, W.5
-
30
-
-
0032790081
-
XtalView/Xfit: A versatile program for manipulating atomic coordinates and electron density
-
McRee, D. E. (1999) XtalView/Xfit: A versatile program for manipulating atomic coordinates and electron density J. Struct. Biol. 125, 156-165
-
(1999)
J. Struct. Biol.
, vol.125
, pp. 156-165
-
-
McRee, D.E.1
-
31
-
-
0030924992
-
Refinement of macromolecular structures by the maximum-likelihood method
-
Murshudov, G. N., Vagin, A. A., and Dodson, E. J. (1997) Refinement of macromolecular structures by the maximum-likelihood method Acta Crystallogr. D53, 240-255
-
(1997)
Acta Crystallogr.
, vol.53
, pp. 240-255
-
-
Murshudov, G.N.1
Vagin, A.A.2
Dodson, E.J.3
-
32
-
-
0032897075
-
Efficient anisotropic refinement of macromolecular structures using FFT
-
Murshudov, G. N., Vagin, A. A., Lebedev, A., Wilson, K. S., and Dodson, E. J. (1999) Efficient anisotropic refinement of macromolecular structures using FFT Acta Crystallogr. D55, 247-255
-
(1999)
Acta Crystallogr.
, vol.55
, pp. 247-255
-
-
Murshudov, G.N.1
Vagin, A.A.2
Lebedev, A.3
Wilson, K.S.4
Dodson, E.J.5
-
33
-
-
0030809260
-
WARP: Improvement and extension of crystallographic phases by weighted averaging of multiple-refined dummy atomic models
-
Perrakis, A., Sixma, T. K., Wilson, K. S., and Lamzin, V. S. (1997) wARP: Improvement and extension of crystallographic phases by weighted averaging of multiple-refined dummy atomic models Acta Crystallogr. D53, 448-455
-
(1997)
Acta Crystallogr.
, vol.53
, pp. 448-455
-
-
Perrakis, A.1
Sixma, T.K.2
Wilson, K.S.3
Lamzin, V.S.4
-
34
-
-
0030586823
-
Checking your imagination: Applications of the free R value
-
Kleywegt, G. J. and Brunger, A. T. (1996) Checking your imagination: Applications of the free R value Structure 4, 897-904
-
(1996)
Structure
, vol.4
, pp. 897-904
-
-
Kleywegt, G.J.1
Brunger, A.T.2
-
35
-
-
0030339738
-
AQUA and PROCHECK-NMR: Programs for checking the quality of protein structures solved by NMR
-
Laskowski, R. A., Rullmannn, J. A., MacArthur, M. W., Kaptein, R., and Thornton, J. M. (1996) AQUA and PROCHECK-NMR: Programs for checking the quality of protein structures solved by NMR J. Biomol. NMR 8, 477-486
-
(1996)
J. Biomol. NMR
, vol.8
, pp. 477-486
-
-
Laskowski, R.A.1
Rullmannn, J.A.2
MacArthur, M.W.3
Kaptein, R.4
Thornton, J.M.5
-
36
-
-
4444371260
-
Anticorrelated motions as a driving force in enzyme catalysis: The dehydrogenase reaction
-
Luo, J. and Bruice, T. C. (2004) Anticorrelated motions as a driving force in enzyme catalysis: The dehydrogenase reaction Proc. Natl. Acad. Sci. U.S.A. 101, 13152-13156
-
(2004)
Proc. Natl. Acad. Sci. U.S.A.
, vol.101
, pp. 13152-13156
-
-
Luo, J.1
Bruice, T.C.2
-
38
-
-
0037435776
-
Crystal structures of Tritrichomonas foetus inosine monophosphate dehydrogenase in complex with substrate, cofactor and analogs: A structural basis for the random-in ordered-out kinetic mechanism
-
Prosise, G. L. and Lueke, H. (2003) Crystal structures of Tritrichomonas foetus inosine monophosphate dehydrogenase in complex with substrate, cofactor and analogs: A structural basis for the random-in ordered-out kinetic mechanism J. Mol. Biol. 326, 517-527
-
(2003)
J. Mol. Biol.
, vol.326
, pp. 517-527
-
-
Prosise, G.L.1
Lueke, H.2
-
39
-
-
0028153795
-
Planar stacking interactions of arginine and aromatic side-chains in proteins
-
Flocco, M. M. and Mowbray, S. L. (1994) Planar stacking interactions of arginine and aromatic side-chains in proteins J. Mol. Biol. 235, 709-717
-
(1994)
J. Mol. Biol.
, vol.235
, pp. 709-717
-
-
Flocco, M.M.1
Mowbray, S.L.2
-
40
-
-
0001890332
-
Crystal Structure, Coenzyme Conformations, and Protein Interactions
-
In (Dolphin, D. Poulson, R. and Avramovic, O. Eds.) pp, Wiley and Sons, New York.
-
Eklund, H. and Branden, C. I. (1987) Crystal Structure, Coenzyme Conformations, and Protein Interactions. In Pyridine Nucleotide Coenzyme: Chemical, Biochemical and Medical Aspects (Dolphin, D., Poulson, R., and Avramovic, O., Eds.) pp 51-98, Wiley and Sons, New York.
-
(1987)
Pyridine Nucleotide Coenzyme: Chemical, Biochemical and Medical Aspects
, pp. 51-98
-
-
Eklund, H.1
Branden, C.I.2
|