-
1
-
-
33746931581
-
On outliers and activity cliffs-Why QSAR often disappoints
-
Maggiora, G. M. On outliers and activity cliffs-Why QSAR often disappoints J. Chem. Inf. Model. 2006, 46, 1535-1535
-
(2006)
J. Chem. Inf. Model.
, vol.46
, pp. 1535-1535
-
-
Maggiora, G.M.1
-
2
-
-
84859179256
-
Exploring activity cliffs in medicinal chemistry
-
DOI: 10.1021/jm201706b
-
Stumpfe, D.; Bajorath, J. Exploring activity cliffs in medicinal chemistry. J. Med. Chem. 2012, 55, DOI: 10.1021/jm201706b.
-
(2012)
J. Med. Chem.
, vol.55
-
-
Stumpfe, D.1
Bajorath, J.2
-
3
-
-
78649844432
-
Activity landscape representations for structure-activity relationship analysis
-
Wassermann, A. M.; Wawer, M.; Bajorath, J. Activity landscape representations for structure-activity relationship analysis J. Med. Chem. 2010, 53, 8209-8223
-
(2010)
J. Med. Chem.
, vol.53
, pp. 8209-8223
-
-
Wassermann, A.M.1
Wawer, M.2
Bajorath, J.3
-
4
-
-
42149090634
-
Structure - Activity landscape index: Identifying and quantifying activity cliffs
-
DOI 10.1021/ci7004093
-
Guha, R.; Van Drie, J. H. Structure-activity landscape index: Identifying and quantifying activity cliffs J. Chem. Inf. Model 2008, 48, 646-658 (Pubitemid 351535432)
-
(2008)
Journal of Chemical Information and Modeling
, vol.48
, Issue.3
, pp. 646-658
-
-
Guha, R.1
Van Drie, J.H.2
-
5
-
-
67649341994
-
Navigating structure-activity landscapes
-
Bajorath, J.; Peltason, L.; Wawer, M.; Guha, R.; Lajiness, M. S.; van Drie, J. H. Navigating structure-activity landscapes Drug Discovery Today 2009, 14, 698-705
-
(2009)
Drug Discovery Today
, vol.14
, pp. 698-705
-
-
Bajorath, J.1
Peltason, L.2
Wawer, M.3
Guha, R.4
Lajiness, M.S.5
Van Drie, J.H.6
-
6
-
-
84555194686
-
Assessing the Confidence level of public domain compound activity data and the impact of alternative potency measurements on SAR analysis
-
Stumpfe, D.; Bajorath, J. Assessing the Confidence level of public domain compound activity data and the impact of alternative potency measurements on SAR analysis J. Chem. Inf. Model. 2011, 51, 3131-3137
-
(2011)
J. Chem. Inf. Model.
, vol.51
, pp. 3131-3137
-
-
Stumpfe, D.1
Bajorath, J.2
-
7
-
-
65249087355
-
Characterization of activity landscapes using 2D and 3D similarity methods: Consensus activity cliffs
-
Medina-Franco, J. L.; Martínez-Mayorga, K.; Bender, A.; Marín, R. M.; Giulianotti, M. A.; Pinilla, C.; Houghten, R. A. Characterization of activity landscapes using 2D and 3D similarity methods: Consensus activity cliffs J. Chem. Inf. Model. 2009, 49, 477-491
-
(2009)
J. Chem. Inf. Model.
, vol.49
, pp. 477-491
-
-
Medina-Franco, J.L.1
Martínez-Mayorga, K.2
Bender, A.3
Marín, R.M.4
Giulianotti, M.A.5
Pinilla, C.6
Houghten, R.A.7
-
8
-
-
21244468757
-
Searching techniques for databases of two- and three-dimensional chemical structures
-
DOI 10.1021/jm0582165
-
Willett, P. Searching techniques for databases of two- and three-dimensional structures J. Med. Chem. 2005, 48, 4183-4199 (Pubitemid 40884919)
-
(2005)
Journal of Medicinal Chemistry
, vol.48
, Issue.13
, pp. 4183-4199
-
-
Willett, P.1
-
9
-
-
79955403452
-
Local structural changes, global data views: Graphical substructure-activity relationship trailing
-
Wawer, M.; Bajorath, J. Local structural changes, global data views: Graphical substructure-activity relationship trailing J. Med. Chem. 2011, 54, 2944-2951
-
(2011)
J. Med. Chem.
, vol.54
, pp. 2944-2951
-
-
Wawer, M.1
Bajorath, J.2
-
10
-
-
85016377807
-
Structure Modification in Chemical Databases
-
Oprea, T. I. Wiley-VCH: Weinheim, Germany
-
Kenny, P. W.; Sadowski, J. Structure Modification in Chemical Databases. In Chemoinformatics in Drug Discovery; Oprea, T. I., Ed.; Wiley-VCH: Weinheim, Germany, 2004; pp 271-285.
-
(2004)
Chemoinformatics in Drug Discovery
, pp. 271-285
-
-
Kenny, P.W.1
Sadowski, J.2
-
11
-
-
78049415439
-
Chemical substitutions that introduce activity cliffs across different compound classes and biological targets
-
Wassermann, A. M.; Bajorath, J. Chemical substitutions that introduce activity cliffs across different compound classes and biological targets J. Chem. Inf. Model. 2010, 50, 1248-1256
-
(2010)
J. Chem. Inf. Model.
, vol.50
, pp. 1248-1256
-
-
Wassermann, A.M.1
Bajorath, J.2
-
12
-
-
84862192766
-
ChEMBL: A large-scale bioactivity database for drug discovery
-
Gaulton, A.; Bellis, L. J.; Bento, A. P.; Chambers, J.; Davies, M.; Hersey, A.; Light, Y.; McGlinchey, S.; Michalovich, D.; Al-Lazikani, B.; Overington, J. P. ChEMBL: A large-scale bioactivity database for drug discovery Nucleic Acids Res. 2012, 40, D1100-D1107
-
(2012)
Nucleic Acids Res.
, vol.40
-
-
Gaulton, A.1
Bellis, L.J.2
Bento, A.P.3
Chambers, J.4
Davies, M.5
Hersey, A.6
Light, Y.7
McGlinchey, S.8
Michalovich, D.9
Al-Lazikani, B.10
Overington, J.P.11
-
13
-
-
84861501353
-
-
ChEMBL. (accessed February 8)
-
ChEMBL. http://www.ebi.ac.uk/chembldb/ (accessed February 8, 2012).
-
(2012)
-
-
-
14
-
-
33846108633
-
BindingDB: A Web-accessible database of experimentally determined protein-ligand binding affinities
-
Liu, T.; Lin, Y.; Wen, X.; Jorissen, R. N.; Gilson, M. K. BindingDB: A Web-accessible database of experimentally determined protein-ligand binding affinities Nucleic Acids Res. 2007, 35, D198-D201
-
(2007)
Nucleic Acids Res.
, vol.35
-
-
Liu, T.1
Lin, Y.2
Wen, X.3
Jorissen, R.N.4
Gilson, M.K.5
-
15
-
-
84861504070
-
-
BindingDB. (accessed February 8)
-
BindingDB. http://www.bindingdb.org/ (accessed February 8, 2012).
-
(2012)
-
-
-
16
-
-
84861513229
-
-
PubChem BioAssay. (accessed February 8)
-
PubChem BioAssay. http://pubchem.ncbi.nlm.nih.gov/ (accessed February 8, 2012).
-
(2012)
-
-
-
17
-
-
79960362109
-
Comprehensive analysis of single- and multi-target activity cliffs formed by currently available bioactive compounds
-
Wassermann, A. M.; Dimova, D.; Bajorath, J. Comprehensive analysis of single- and multi-target activity cliffs formed by currently available bioactive compounds Chem. Biol. Drug Des. 2011, 78, 224-228
-
(2011)
Chem. Biol. Drug Des.
, vol.78
, pp. 224-228
-
-
Wassermann, A.M.1
Dimova, D.2
Bajorath, J.3
-
18
-
-
77949848865
-
Computationally efficient algorithm to identify matched molecular pairs (MMPs) in large data sets
-
Hussain, J.; Rea, C. Computationally efficient algorithm to identify matched molecular pairs (MMPs) in large data sets J. Chem. Inf. Model. 2010, 50, 339-348
-
(2010)
J. Chem. Inf. Model.
, vol.50
, pp. 339-348
-
-
Hussain, J.1
Rea, C.2
-
19
-
-
2042489375
-
-
Symyx Software: San Ramon, CA
-
MACCS Structural Keys; Symyx Software: San Ramon, CA, 2005.
-
(2005)
MACCS Structural Keys
-
-
|