메뉴 건너뛰기




Volumn 50, Issue 7, 2010, Pages 1248-1256

Chemical substitutions that introduce activity cliffs across different compound classes and biological targets

Author keywords

[No Author keywords available]

Indexed keywords

CHEMICAL ANALYSIS; CHEMICAL REACTIONS; SCAFFOLDS;

EID: 78049415439     PISSN: 15499596     EISSN: 1549960X     Source Type: Journal    
DOI: 10.1021/ci1001845     Document Type: Article
Times cited : (58)

References (20)
  • 1
    • 0015417053 scopus 로고
    • Utilization of operational schemes for analog synthesis in drug design
    • Topliss, J. G. Utilization of Operational Schemes for Analog Synthesis in Drug Design. J. Med. Chem. 1972, 15, 1006-1011.
    • (1972) J. Med. Chem. , vol.15 , pp. 1006-1011
    • Topliss, J.G.1
  • 2
    • 0036025428 scopus 로고    scopus 로고
    • The most common chemical replacements in drug-like compounds
    • DOI 10.1021/ci0100806
    • Sheridan, R. P. The Most Common Chemical Replacements in Drug-Like Compounds. J. Chem. Inf. Comput. Sci. 2002, 42, 103-108. (Pubitemid 35355330)
    • (2002) Journal of Chemical Information and Computer Sciences , vol.42 , Issue.1 , pp. 103-108
    • Sheridan, R.P.1
  • 3
    • 44449118958 scopus 로고    scopus 로고
    • Symyx Software: San Ramon, CA
    • MDL Drug Data Report (MDDR); Symyx Software: San Ramon, CA, 2005.
    • (2005) MDL Drug Data Report (MDDR)
  • 4
    • 34547659363 scopus 로고    scopus 로고
    • A database of historically-observed chemical replacements
    • DOI 10.1021/ci600395u
    • Haubertin, D. Y.; Bruneau, P. A Database of Historically-Observed Chemical Replacements. J. Chem. Inf. Model. 2007, 47, 1294-1302. (Pubitemid 47210033)
    • (2007) Journal of Chemical Information and Modeling , vol.47 , Issue.4 , pp. 1294-1302
    • Haubertin, D.Y.1    Bruneau, P.2
  • 5
    • 69549097796 scopus 로고    scopus 로고
    • Rationalizing lead optimization by associating quantitative relevance with molecular structure modification
    • Raymond, J. W.; Watson, I. A.; Mahoui, A. Rationalizing Lead Optimization by Associating Quantitative Relevance with Molecular Structure Modification. J. Chem. Inf. Model. 2009, 49, 1952-1962.
    • (2009) J. Chem. Inf. Model. , vol.49 , pp. 1952-1962
    • Raymond, J.W.1    Watson, I.A.2    Mahoui, A.3
  • 6
    • 39149090377 scopus 로고    scopus 로고
    • Statistical analysis of the effects of common chemical substituents on ligand potency
    • DOI 10.1021/jm070838y
    • Hajduk, P. J.; Sauer, D. R. Statistical Analysis of the Effects of Common Chemical Substituents on Ligand Potency. J. Med. Chem. 2008, 51, 553-564. (Pubitemid 351252283)
    • (2008) Journal of Medicinal Chemistry , vol.51 , Issue.3 , pp. 553-564
    • Hajduk, P.J.1    Sauer, D.R.2
  • 7
    • 85016377807 scopus 로고    scopus 로고
    • Structure modification in chemical databases
    • Oprea, T. I., Ed.; Wiley-VCH: Weinheim, Germany
    • Kenny, P. W.; Sadowski, J. Structure Modification in Chemical Databases. In Chemoinformatics in Drug Discovery; Oprea, T. I., Ed.; Wiley-VCH: Weinheim, Germany, 2004; pp 271-285.
    • (2004) Chemoinformatics in Drug Discovery , pp. 271-285
    • Kenny, P.W.1    Sadowski, J.2
  • 8
    • 77949848865 scopus 로고    scopus 로고
    • Computationally efficient algorithm to identify Matched Molecular Pairs (MMPs) in large data sets
    • Hussain, J.; Rea, C. Computationally Efficient Algorithm to Identify Matched Molecular Pairs (MMPs) in Large Data Sets. J. Chem. Inf. Model. 2010, 50, 339-348.
    • (2010) J. Chem. Inf. Model. , vol.50 , pp. 339-348
    • Hussain, J.1    Rea, C.2
  • 9
    • 33746931581 scopus 로고    scopus 로고
    • On outliers and activity cliffs - Why QSAR often disappoints
    • DOI 10.1021/ci060117s
    • Maggiora, G. M. On Outliers and Activity Cliffs - Why QSAR Often Disappoints. J. Chem. Inf. Model. 2006, 46, 1535. (Pubitemid 44185680)
    • (2006) Journal of Chemical Information and Modeling , vol.46 , Issue.4 , pp. 1535
    • Maggiora, G.M.1
  • 11
    • 77952000491 scopus 로고    scopus 로고
    • Molecular scaffolds with high propensity to form multi-target activity cliffs
    • Hu, Y.; Bajorath, J. Molecular Scaffolds with High Propensity to Form Multi-Target Activity Cliffs. J. Chem. Inf. Model. 2010, 50, 500-510.
    • (2010) J. Chem. Inf. Model. , vol.50 , pp. 500-510
    • Hu, Y.1    Bajorath, J.2
  • 12
    • 84874647401 scopus 로고    scopus 로고
    • ChemblDB; EMBL-EBI (European Bioinformatics Institute: Cambridge, U.K. Accessed January 2, 2010
    • ChemblDB; EMBL-EBI (European Bioinformatics Institute: Cambridge, U.K.; http://www.ebi.ac.uk/chembl/. Accessed January 2, 2010.
    • European Bioinformatics Institute: Cambridge, U.K.;
  • 13
    • 0036169718 scopus 로고    scopus 로고
    • The binding database: Data management and interface design
    • Chen, X.; Lin, Y.; Liu, M.; Gilson, M. K. The Binding Database: Data Management and Interface Design. Bioinformatics 2002, 18, 130-139. (Pubitemid 34145041)
    • (2002) Bioinformatics , vol.18 , Issue.1 , pp. 130-139
    • Chen, X.1    Lin, Y.2    Liu, M.3    Gilson, M.K.4
  • 14
    • 33846108633 scopus 로고    scopus 로고
    • BindingDB: A web-accessible database of experimentally determined protein-ligand binding affinities
    • DOI 10.1093/nar/gkl999
    • Liu, T.; Lin, Y.; Wen, X.; Jorissen, R. N.; Gilson, M. K. BindingDB: a Web-Accessible Database of Experimentally Determined Protein-Ligand Binding Affinities. Nucleic Acids Res. 2007, 35, D198-D201. (Pubitemid 46056198)
    • (2007) Nucleic Acids Research , vol.35 , Issue.SUPPL. 1
    • Liu, T.1    Lin, Y.2    Wen, X.3    Jorissen, R.N.4    Gilson, M.K.5
  • 15
    • 79951526108 scopus 로고    scopus 로고
    • PubChem BioAssay; National Center for Biotechnology Information: Bethesda MD. Accessed January 2, 2010
    • PubChem BioAssay; National Center for Biotechnology Information: Bethesda, MD; http://pubchem.ncbi.nlm.nih.gov/. Accessed January 2, 2010.
  • 16
    • 79951524685 scopus 로고    scopus 로고
    • Molecular Operating Environment; Chemical Computing Group Inc.: Montreal, Quebec, Canada
    • SVL, Molecular Operating Environment; Chemical Computing Group Inc.: Montreal, Quebec, Canada, 2007.
    • (2007) SVL
  • 17
    • 0029894013 scopus 로고    scopus 로고
    • The properties of known drugs. 1. Molecular frameworks
    • DOI 10.1021/jm9602928
    • Bemis, G. W.; Murcko, M. A. The Properties of Known Drugs. 1. Molecular Frameworks. J. Med. Chem. 1996, 39, 2887-2893. (Pubitemid 26251026)
    • (1996) Journal of Medicinal Chemistry , vol.39 , Issue.15 , pp. 2887-2893
    • Bemis, G.W.1    Murcko, M.A.2
  • 18
    • 54249156879 scopus 로고    scopus 로고
    • Student Edition, Version 6.1; Accelrys, Inc.: San Diego, CA
    • Scitegic Pipeline Pilot, Student Edition, Version 6.1; Accelrys, Inc.: San Diego, CA, 2007.
    • (2007) Scitegic Pipeline Pilot
  • 19
    • 33646841350 scopus 로고    scopus 로고
    • BioFocus: Saffron Walden, U.K. Accessed January 2, 2010
    • NIH Molecular Libraries Small Molecule Repository; BioFocus: Saffron Walden, U.K.; http://mlsmr.glpg.com. Accessed January 2, 2010.
    • NIH Molecular Libraries Small Molecule Repository
  • 20
    • 79951545810 scopus 로고    scopus 로고
    • Daylight Chemical Information Systems, Inc: Aliso Viejo, CA
    • SMIRKS; Daylight Chemical Information Systems, Inc: Aliso Viejo, CA, 2008.
    • (2008) SMIRKS


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.