QTL detection of seven spike-related traits and their genetic correlations in wheat using two related RIL populations

Euphytica

Volumn 186, Issue 1, 2012, Pages 177-192

  Cui, Fa ^a,b   Ding, Anming ^a   Li, Jun ^a,c   Zhao, Chunhua ^a   Wang, Lin ^d   Wang, Xiuqin ^d   Qi, Xiaolei ^a   Li, Xingfeng ^a   Li, Guoyu ^a   Gao, Jurong ^a   Wang, Honggang ^a  

^a SHANDONG AGRICULTURAL UNIVERSITY   (China)

^b INSTITUTE OF GENETICS AND DEVELOPMENTAL BIOLOGY   (China)

^c Tianxing Biotechnology Co Ltd Handian Industrial Zone   (China)

^d Municipal Academy of Agricultural Sciences   (China)

Author keywords

Genetic correlations; QTL; RILs; Spike related traits; Wheat

Indexed keywords

TRITICUM AESTIVUM;

EID: 84861481538     PISSN: 00142336     EISSN: 15735060     Source Type: Journal    
DOI: 10.1007/s10681-011-0550-7     Document Type: Article

References (45)

1. Aguilar V, Stamp P, Winzeler M, Winzeler H, Schachermayr G, Keller B, Zanetti S, Messmer MM (2005) Inheritance of field resistance to Stagonospora nodorum leaf and glume blotch and correlations with other morphological traits in hexaploid wheat (Triticum aestivum L.). Theor Appl Genet 111: 325-336.
2. Beavis WB (1998) QTL analyses: power, precision, and accuracy. In: Patterson AH (ed) Molecular dissection of complex traits. CRC Press, Boca Raton.
3. Börner A, Schumann E, Fürste A, Cöter H, Leithold B, Röder MS, Weber WE (2002) Mapping of quantitative trait locus determining agronomic important characters in hexaploid wheat (Triticum aestivum L.). Theor Appl Genet 105: 921-936.
4. Buckler ES, Holland JB, Acharya CB, Brown PJ, Browne C, Ersoz E, Flint-Garcia S, Garcia A, Glaubitz JC, Goodman MM, Harjes C, Guill K, Kroom DE, Larsson S, Lepak NK, Li HH, Mitchell SE, Pressoin G, Peiffer JA, Rosas MO, Rocheford TR, Romay MC, Romero S, Salvo S, Villeda HS, Sliva HSD, Sun Q, Tian F, Upadyayula N, Ware D, Yates H, Yu J, Zhang Z, Kresovich S, McMullen MD (2009) The genetic architecture of maize flowering time. Science 325: 714-718.
5. Chu CG, Xu SS, Friesen TL, Faris JD (2008) Whole genome mapping in a wheat doubled haploid population using SSRs and TRAPs and the identification of QTL for agronomic traits. Mol Breeding 22: 251-266.
6. Deng SM, Wu XR, Wu YY, Zhou RH, Wang HG, Jia JZ, Liu SB (2010) Characterization and precise mapping of a QTL increasing spike number with pleiotropic effects in wheat. Theor Appl Genet 122: 281-289.
7. Doerge RW (2002) Multifactorial genetics: mapping and analysis of quantitative trait locus in experimental populations. Nat Rev 3: 43-52.
8. Donald CM (1968) The breeding of crop ideotypes. Euphytica 17: 385-403.
9. Gao LF, Jing RL, Huo NX, Li Y, Li XP, Zhou RH, Chang XP, Tang JF, Ma ZY, Jia JZ (2004) One hundred and one new microsatellite loci derived from ESTs (EST-SSR) in bread wheat. Theor Appl Genet 108: 1392-1400.
10. Hao YF, Liu AF, Wang YH, Feng DS, Gao JR, Li XF, Liu SB, Wang HG (2008) Pm23: a new allele of Pm4 located on chromosome 2AL in wheat. Theor Appl Genet 117: 1205-1212.
11. Jantasuriyarat C, Vales MI, Watson CJW, Riera-Lizarazu O (2004) Identification and mapping of genetic loci affecting the free-threshing habit and spike compactness in wheat (Triticum aestivum L.). Theor Appl Genet 108: 261-273.
12. Johnson EB, Nalam VJ, Zemetra RS, Riera-Lizarazu O (2008) Mapping the compactum locus in wheat (Triticum aestivum L.) and its relationship to other spike morphology genes of the Triticeae. Euphytica 163: 193-201.
13. Kato K, Miura H, Sawada S (1999) QTL mapping of genes controlling ear emergence time and plant height on chromosome 5A of wheat. Theor Appl Genet 98: 472-477.
14. Kato K, Miura H, Sawada S (2000) Mapping QTLs controlling grain yield and its components on chromosome 5A of wheat. Theor Appl Genet 101: 1114-1121.
15. Kirigwi FM, Ginkel MV, Brown-Guedira G, Gill BS, Paulsen GM, Fritz AK (2007) Markers associated with a QTL for grain yield in wheat under drought. Mol Breeding 20: 401-413.
16. Kosambi DD (1944) The estimation of map distances from recombination values. Annu Eugen 12: 172-175.
17. Kumar N, Kulwal PL, Balyan HS, Gupta PK (2007) QTL mapping for yield and yield contributing traits in two mapping populations of bread wheat. Mol Breeding 19: 163-177.
18. Kuspira J, Unrau J (1957) Genetic analysis of certain characters in common wheat using whole chromosome substitution lines. Can J Plant Sci 37: 300-326.
19. Lander ES, Green P, Abrahamson J, Barlow A, Daly MJ, Lincoln SE, Newburg L (1987) MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics 1: 174-181.
20. Li WL, Nelson JC, Chu CY, Shi LH, Huang SH, Lin DJ (2002) Chromosomal locations and genetic relationships of tiller and spike characters in wheat. Euphytica 125: 357-366.
21. Li SS, Jia JZ, Wei XY, Zhang XC, Li LZ, Chen HM, Fan YD, Sun HY, Zhao XH, Lei TD, Xu YF, Jiang FS, Wang HG, Li LH (2007) A intervarietal genetic map and QTL analysis for yield traits in wheat. Mol Breeding 20: 167-178.
22. Liang D, Tang JW, Peña RJ, Singh R, He XY, Shen XY, Yao DN, Xia XH, He ZH (2010) Characterization of CIMMYT bread wheats for high and low-molecular weight glutenin subunits and other quality-related genes with SDS-PAGE, RP-HPLC and molecular markers. Euphytica 172: 235-250.
23. Liu SB, Zhou RH, Dong YC, Li P, Jia JZ (2006) Development, utilization of introgression lines using a synthetic wheat as donor. Theor Appl Genet 112: 1360-1373.
24. Liu SX, Chao SM, Anderson JA (2008) New DNA markers for high molecular weight glutenin subunits in wheat. Theor Appl Genet 118: 177-183.
25. 2 populations. Mol Gen Genomics 277: 31-42.
26. Mackay TFC (2001) The genetic architecture of quantitative traits. Annu Rev Genet 35: 303-339.
27. Manickavelu A, Kawaura K, Imamura H, Mori M, Ogihara Y (2010) Molecular mapping of quantitative trait locus for domestication traits and b-glucan content in a wheat recombinant inbred line population. Euphytica 177: 179-190.
28. Marza F, Bai GH, Carver BF, Zhou WC (2006) Quantitative trait locus for yield and related traits in the wheat population Ning7840 × Clark. Theor Appl Genet 112: 688-698.
29. Mullan DJ, Platteter A, Teakle NL, Appels R, Colmer TD, Anderson JM, Francki MG (2005) EST-derived SSR markers from defined regions of the wheat genome to identify Lophopyrumelongatum specific loci. Genome 48: 811-822.
30. Nagaoka T, Ogihara Y (1997) Applicability of inter-simple sequence repeat polymorphisms in wheat for use as DNA markers in comparison to RFLP and RAPD markers. Theor Appl Genet 94: 597-602.
31. Paillard S, Schnurbusch T, Winzeler M, Messmer M, Sourdille P, Abderhalden O, Keller B, Schachermayr G (2003) An integrative genetic linkage map of winter wheat (Triticum aestivum L.). Theor Appl Genet 107: 1235-1242.
32. Peng JH, Lapitan NLV (2005) Characterization of EST-derived microsatellites in the wheat genome and development of eSSR markers. Funct Integr Genomics 5: 80-96.
33. Rao MVP (1977) Mapping of the Sphaerococcum gene 'S' on chromosome 3D of wheat. Cereal Res Comm 5: 15-17.
34. Röder MS, Korzun V, Wendehake K, Plaschke J, Tixier M-H, Leroy P, Ganal MW (1998) A microsatellite map of wheat. Genetics 149: 2007-2023.
35. Schön CC, Utz HF, Groh S, Truberg B, Openshaw S, Melchinger AE (2004) Quantitative trait locus mapping based on resampling in a vast maize testcross experiment and its relevance to quantitative genetics for complex traits. Genetics 167: 485-498.
36. Sears ER (1954) The aneuploids of common wheat. Univ Miss Res Bull 572: 1-58.
37. Singh NK, Shepherd KW (1991) A simplified SDS-PAGE procedure for separation LMW subunits of glutenin. J Cereal Sci 14: 203-208.
38. Sourdille P, Tixier MH, Charmet G, Gay G, Cadalen T, Bernard S, Bernard M (2000) Location of genes involved in ear compactness in wheat (Triticum aestivum) by means of molecular markers. Mol Breeding 6: 247-255.
39. Sourdille P, Cadalen T, Guyomarc'h H, Snape JW, Perretant MR, Charmet G, Boeuf C, Bernard S, Bernard M (2003) An update of the Courtot × Chinese Spring intervarietal molecular marker linkage map for the QTL detection of agronomic traits in whea. Theor Appl Genet 106: 530-538.
40. Stein N, Herren G, Keller B (2001) A new DNA extraction method for high-throughout marker analysis in a large-genome species such as Triticum aestivum. Plant Breed 120: 354-356.
41. Suenaga K, Khairallah M, William HM, Hoisington DA (2005) A new intervarietal linkage map and its application for quantitative trait locus analysis of "gigas" features in bread wheat. Genome 48: 65-75.
42. Uga Y, Siangliw M, Nagamine T, Ohsama R, Fujimura T, Fukuta Y (2010) Comparative mapping of QTLs determining glume, pistil and stamen sizes in cultivated rice (Oryza sativa L.). Plant Breeding 129: 657-669.
43. Vales MI, Schön CC, Capettini F, Chen XM, Corey AE, Mather DE, Mundt CC, Richardson KL, Sandoval-Islas JS, Utz HF, Hayes PM (2005) Effect of population size on the estimation of QTL: a test using resistance to barley stripe rust. Theor Appl Genet 111: 1260-1270.
44. Zhao CH, Cui F, Zong H, Wang YH, Bao YG, Hao YF, Du B, Wang HG (2009) Transmission of the Chromosome 1R in winter wheat germplasm Aimengniu and its derivatives revealed by molecular markers. Agric Sci China 8(6): 652-657.
45. Zou F, Gelfond JAL, Airey DC, Lu L, Manly KF, Williams RW, Hreadgill DW (2005) Quantitative trait locus analysis using recombinant inbred intercross (RIX): theoretical and empirical considerations. Genetics 170: 1299-1311.