Applicability of inter-simple sequence repeat polymorphisms in wheat for use as DNA markers in comparison to RFLP and RAPD markers

Theoretical and Applied Genetics

Volumn 94, Issue 5, 1997, Pages 597-602

  Nagaoka, T ^a   Ogihara, Y ^a  

^a YOKOHAMA CITY UNIVERSITY   (Japan)

Author keywords

Markers; Microsatellite DNA; PCR; RAPD; Wheats

Indexed keywords

EID: 0030920044     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s001220050456     Document Type: Article

References (22)

1. Bell CJ, Ecker JR (1994) Assignment of 30 microsatellite loci to the linkage map of Arabidopsis. Genomics 19:137-144
2. Condit R, Hubbell SP (1991) Abundance and DNA sequence of two-base repeat regions in tropical tree genomes. Genome 34:66-71
3. Devos KM, Gale MD (1992) The use of random amplified polymorphic DNA markers in wheat. Theor Appl Genet 84: 567-572
4. Gupta M, chyi Y-S, Romero-Severson J, Own JL (1994) Amplification of DNA markers from evolutionarily diverse genomes using single primers of simple-sequence repeats. Theor Appl Genet 89:998-1006
5. Hamada H, Petrino MG, Kakunaga T (1982) A novel repeated element with Z-DNA-forming potential is widely found in evolutionarily diverse eukaryotic genomes. Proc Natl Acad Sci USA 79:6465-6469
6. Lagercrantz U, Ellegren H, Andersson L (1993) The abundance of various polymorphic microsatellite motifs differs between plants and vertebrates. Nucleic Acids Res 21:1111-1115
7. Liu YG, Mori N, Tsunewaki K (1990) Restriction fragment length polymorphism (RFLP) analysis in wheat. I. genomic DNA library construction and RFLP analysis in common wheat. Jpn J Genet 65:367-380
8. Monna L, Miyao A, Inoue T, Fukuoka S, Yamazaki M, Sun Zhong H, Sasaki T, Minobe Y (1994) Determination of RAPD markers in rice and their conversion into sequence tagged sites (STSs) and STS-specific primers. DNA Res 1:139-148
9. Morgante M, Olivieri AM (1993) PCR-amplified microsatellites as markers in plant genetics. Plant J 3:175-182
10. Murray MG, Thompson WF (1980) Rapid isolation of high-molecular-weight plant DNA. Nucleic Acids Res 8:4321-4325
11. Ogihara Y, Shimizu H, Hasegawa K, Tsujimoto H, Sasakuma T(1994) Chromosome assignment of four photosynthesis-related genes and their variability in wheat species. Theor Appl Genet 88:383-394
12. Rafalski JA, Tingey SV, Williams JGK (1991) RAPD markers - a new technology for genetic mapping and plant breeding. Ag-Biotech News Inf 3:645-648
13. Saghai-Maroof MA, Biyashev RM, Yang GP, Zhang Q, Allard RW (1994) Extraordinarily polymorphic microsatellite DNA in barley: species diversity, chromosomal locations, and population dynamics. Proc Natl Acad Sci USA 91: 5466-5470
14. Senior ML, Heun M (1993) Mapping maize microsatellites and polymerase chain reaction confirmation of the targeted repeats using a et primer. Genome 36:884-889
15. Sneath PHA, Sokal RR (1973) Numerical taxonomy. The principles and practice of numerical classification. W. H. Freeman and Co, San Francisco
16. Takumi S, Nasuda S, Liu YG, Tsunewaki K (1993) Wheat phylogeny determined by RFLP analysis of nuclear DNA. I. Einkorn wheat. Jpn J Genet 68:73-79
17. Tautz D (1989) Hypervariability of simple sequences as a general source for polymorphic DNA markers. Nucleic Acids Res 12:6463-6471
18. Tsumura Y, Ohba K, Strauss SH (1996) Diversity and inheritance of inter-simple sequence repeat polymorphisms in Douglas-fir (Pseudotsuga menziesii) and sugi (Cryptomeria japonica). Theor Appl Genet 92:40-45
19. Wang Z, Weber JL, Zhong G, Tanksley DS (1994) Survey of plant short tandem DNA repeats. Theor Appl Genet 88: 1-6
20. Weber JL, May PE (1989) Abundant class of human DN A polymorphisms which can be typed using the polymerase chain reaction. Am J Hum Genet 44:388-396
21. Wu K-S, Tanksley S (1993) Abundance, polymorphism and genetic mapping of microsatellites in rice. Mol Gen Genet 241: 225-235
22. Zietkiewicz E, Rafalski A, Labuda D (1994) Genome fingerprinting by simple sequence repeat (SSR)-anchored polymerase chain reaction amplification. Genomics 20:176-183