메뉴 건너뛰기




Volumn 9, Issue 4, 2012, Pages 361-363

Small RNAs and virulence in bacterial pathogens

Author keywords

Antisense RNA; CRISPR; Hfq; Pathogenesis; Post transcriptional regulation; sRNA; Virulence

Indexed keywords

RIBONUCLEOPROTEIN; RNA BINDING PROTEIN; SMALL UNTRANSLATED RNA; TRANSCRIPTOME;

EID: 84860760144     PISSN: 15476286     EISSN: 15558584     Source Type: Journal    
DOI: 10.4161/rna.20517     Document Type: Editorial
Times cited : (12)

References (42)
  • 1
    • 77958028354 scopus 로고    scopus 로고
    • Regulatory RNA in bacterial pathogens
    • PMID:20638647
    • Papenfort K, Vogel J. Regulatory RNA in bacterial pathogens. Cell Host Microbe 2010; 8:116-27; PMID:20638647; http://dx.doi.org/10.1016/j. chom.2010.06.008.
    • (2010) Cell Host Microbe , vol.8 , pp. 116-127
    • Papenfort, K.1    Vogel, J.2
  • 2
    • 34748871477 scopus 로고    scopus 로고
    • Regulation of gene expression by small non-coding RNAs: A quantitative view
    • PMID:17893699
    • Shimoni Y, Friedlander G, Hetzroni G, Niv G, Altuvia S, Biham O, et al. Regulation of gene expression by small non-coding RNAs: a quantitative view. Mol Syst Biol 2007; 3:138; PMID:17893699; http://dx.doi. org/10.1038/msb4100181.
    • (2007) Mol Syst Biol , vol.3 , pp. 138
    • Shimoni, Y.1    Friedlander, G.2    Hetzroni, G.3    Niv, G.4    Altuvia, S.5    Biham, O.6
  • 3
    • 0035806973 scopus 로고    scopus 로고
    • Computational identification of noncoding RNAs in E. coli by comparative genomics
    • PMID:11553332
    • Rivas E, Klein RJ, Jones TA, Eddy SR. Computational identification of noncoding RNAs in E. coli by comparative genomics. Curr Biol 2001; 11:1369-73; PMID:11553332; http://dx.doi.org/10.1016/S0960- 9822(01)00401-8.
    • (2001) Curr Biol , vol.11 , pp. 1369-1373
    • Rivas, E.1    Klein, R.J.2    Jones, T.A.3    Eddy, S.R.4
  • 4
    • 0035395606 scopus 로고    scopus 로고
    • Identification of novel small RNAs using comparative genomics and microarrays
    • PMID:11445539
    • Wassarman KM, Repoila F, Rosenow C, Storz G, Gottesman S. Identification of novel small RNAs using comparative genomics and microarrays. Genes Dev 2001; 15:1637-51; PMID:11445539; http://dx.doi. org/10.1101/gad.901001.
    • (2001) Genes Dev , vol.15 , pp. 1637-1651
    • Wassarman, K.M.1    Repoila, F.2    Rosenow, C.3    Storz, G.4    Gottesman, S.5
  • 5
    • 0035954304 scopus 로고    scopus 로고
    • Novel small RNA-encoding genes in the intergenic regions of Escherichia coli
    • PMID:11448770
    • Argaman L, Hershberg R, Vogel J, Bejerano G, Wagner EG, Margalit H, et al. Novel small RNA-encoding genes in the intergenic regions of Escherichia coli. Curr Biol 2001; 11:941-50; PMID:11448770; http:// dx.doi.org/10.1016/ S0960-9822(01)00270-6.
    • (2001) Curr Biol , vol.11 , pp. 941-950
    • Argaman, L.1    Hershberg, R.2    Vogel, J.3    Bejerano, G.4    Wagner, E.G.5    Margalit, H.6
  • 6
    • 85011941303 scopus 로고    scopus 로고
    • Computational prediction of sRNAs and their targets in bacteria
    • PMID:20061798
    • Backofen R, Hess WR. Computational prediction of sRNAs and their targets in bacteria. RNA Biol 2010; 7:33-42; PMID:20061798; http://dx.doi.org/10.4161/ rna.7.1.10655.
    • (2010) RNA Biol , vol.7 , pp. 33-42
    • Backofen, R.1    Hess, W.R.2
  • 7
    • 84860769484 scopus 로고    scopus 로고
    • Current knowledge on regulatory RNAs and their machineries in Staphyloccus aureus
    • In press
    • Romilly C., Caldelari I., Parmentier D., Lioliou E., Romby P. Current knowledge on regulatory RNAs and their machineries in Staphyloccus aureus. RNA Biology 2012; 9:In press.
    • (2012) RNA Biology , vol.9
    • Romilly, C.1    Caldelari, I.2    Parmentier, D.3    Lioliou, E.4    Romby, P.5
  • 8
    • 84860774336 scopus 로고    scopus 로고
    • sRNAs and the virulence of Salmonella enterica serovar Typhimurium
    • In press
    • Kristian Haendler, et al. sRNAs and the virulence of Salmonella enterica serovar Typhimurium. RNA Biol 2012:In press.
    • (2012) RNA Biol
    • Haendler, K.1
  • 9
    • 84860731440 scopus 로고    scopus 로고
    • Non-coding RNA and its potential role in Mycobacterium tuberculosis pathogenesis
    • In press
    • Arnvig K, Douglas Y. Non-coding RNA and its potential role in Mycobacterium tuberculosis pathogenesis. RNA Biol 2012; 9:In press.
    • (2012) RNA Biol , vol.9
    • Arnvig, K.1    Douglas, Y.2
  • 10
    • 84860764110 scopus 로고    scopus 로고
    • Non-coding sRNAs regulate virulence in the bacterial pathogen Vibrio cholerae
    • In press
    • Bardill J, Hammer B. Non-coding sRNAs regulate virulence in the bacterial pathogen Vibrio cholerae. RNA Biology 2012; 9:In press.
    • (2012) RNA Biology , vol.9
    • Bardill, J.1    Hammer, B.2
  • 11
    • 84860765578 scopus 로고    scopus 로고
    • Small regulatory RNAs in Pseudomonas aeruginosa
    • In press; PMID:22336763
    • Sonnleitner E, Romeo A, Bläsi U. Small regulatory RNAs in Pseudomonas aeruginosa. RNA Biol 2012; 9:In press; PMID:22336763.
    • (2012) RNA Biol , vol.9
    • Sonnleitner, E.1    Romeo, A.2    Bläsi, U.3
  • 12
    • 84860720471 scopus 로고    scopus 로고
    • The non-coding RNA world of the bacterial pathogen Listeria monocytogenes
    • In press; PMID:22336762
    • Mellin JR, Cossart P. The non-coding RNA world of the bacterial pathogen Listeria monocytogenes. RNA Biol 2012; 9:In press; PMID:22336762.
    • (2012) RNA Biol , vol.9
    • Mellin, J.R.1    Cossart, P.2
  • 13
    • 84860740296 scopus 로고    scopus 로고
    • The Csr/Rsm system of Yersinia and related pathogens: A post-transcriptional strategy for managing virulence
    • In press; PMID:22336760
    • Heroven AK, Böhme K, Dersch P. The Csr/Rsm system of Yersinia and related pathogens: A post-transcriptional strategy for managing virulence. RNA Biol 2012; 9: In press; PMID:22336760.
    • (2012) RNA Biol , vol.9
    • Heroven, A.K.1    Böhme, K.2    Dersch, P.3
  • 14
    • 84860733797 scopus 로고    scopus 로고
    • Small RNAs in streptococci
    • In press
    • Le Rhun A, Charpentier E. Small RNAs in streptococci. RNA Biol 2012; 9:In press.
    • (2012) RNA Biol , vol.9
    • Le Rhun, A.1    Charpentier, E.2
  • 15
    • 60149089144 scopus 로고    scopus 로고
    • Regulatory RNAs in bacteria
    • PMID:19239884
    • Waters LS, Storz G. Regulatory RNAs in bacteria. Cell 2009; 136:615-28; PMID:19239884; http://dx.doi. org/10.1016/j.cell.2009.01.043.
    • (2009) Cell , vol.136 , pp. 615-628
    • Waters, L.S.1    Storz, G.2
  • 16
    • 80053019485 scopus 로고    scopus 로고
    • Regulation by small RNAs in bacteria: Expanding frontiers
    • PMID:21925377
    • Storz G, Vogel J, Wassarman KM. Regulation by small RNAs in bacteria: expanding frontiers. Mol Cell 2011; 43:880-91; PMID:21925377; http://dx.doi. org/10.1016/j.molcel.2011.08.022.
    • (2011) Mol Cell , vol.43 , pp. 880-891
    • Storz, G.1    Vogel, J.2    Wassarman, K.M.3
  • 17
    • 79960433506 scopus 로고    scopus 로고
    • Hfq and its constellation of RNA
    • PMID:21760622
    • Vogel J, Luisi BF. Hfq and its constellation of RNA. Nat Rev Microbiol 2011; 9:578-89; PMID:21760622; http://dx.doi.org/10.1038/nrmicro2615.
    • (2011) Nat Rev Microbiol , vol.9 , pp. 578-589
    • Vogel, J.1    Luisi, B.F.2
  • 18
    • 75249100904 scopus 로고    scopus 로고
    • The role of Hfq in bacterial pathogens
    • PMID:20080057
    • Chao Y, Vogel J. The role of Hfq in bacterial pathogens. Curr Opin Microbiol 2010; 13:24-33; PMID:20080057; http://dx.doi.org/10.1016/j. mib.2010.01.001.
    • (2010) Curr Opin Microbiol , vol.13 , pp. 24-33
    • Chao, Y.1    Vogel, J.2
  • 19
    • 84858865125 scopus 로고    scopus 로고
    • Hfq and Hfqdependent small RNAs are major contributors to multicellular development in Salmonella enterica serovar Typhimurium
    • In press; PMID:22336758
    • Monteiro C, Papenfort K, Hentrich K, Ahmad I, Le Guyon S, Reimann R, et al. Hfq and Hfqdependent small RNAs are major contributors to multicellular development in Salmonella enterica serovar Typhimurium. RNA Biol 2012; 9:In press; PMID:22336758.
    • (2012) RNA Biol , vol.9
    • Monteiro, C.1    Papenfort, K.2    Hentrich, K.3    Ahmad, I.4    Le Guyon, S.5    Reimann, R.6
  • 20
    • 77953120292 scopus 로고    scopus 로고
    • Two antisense RNAs target the transcriptional regulator CsgD to inhibit curli synthesis
    • PMID:20407422
    • Holmqvist E, Reimegård J, Sterk M, Grantcharova N, Römling U, Wagner EG. Two antisense RNAs target the transcriptional regulator CsgD to inhibit curli synthesis. EMBO J 2010; 29:1840-50; PMID:20407422; http://dx.doi.org/10.1038/emboj.2010.73.
    • (2010) EMBO J , vol.29 , pp. 1840-1850
    • Holmqvist, E.1    Reimegård, J.2    Sterk, M.3    Grantcharova, N.4    Römling, U.5    Wagner, E.G.6
  • 21
    • 84858866772 scopus 로고    scopus 로고
    • A small RNA that regulates motility and biofilm formation in response to changes in nutrient availability in Escherichia coli
    • PMID:22289118
    • Thomason MK, Fontaine F, De Lay N, Storz G. A small RNA that regulates motility and biofilm formation in response to changes in nutrient availability in Escherichia coli. Mol Microbiol 2012; 84:17-35; PMID:22289118; http://dx.doi.org/10.1111/j.1365- 2958.2012.07965.x.
    • (2012) Mol Microbiol , vol.84 , pp. 17-35
    • Thomason, M.K.1    Fontaine, F.2    De Lay, N.3    Storz, G.4
  • 22
    • 84858863122 scopus 로고    scopus 로고
    • Targeting of csgD by the small regulatory RNA RprA links stationary phase, biofilm formation and cell envelope stress in Escherichia coli
    • PMID:22356413
    • Mika F, Busse S, Possling A, Berkholz J, Tschowri N, Sommerfeldt N, et al. Targeting of csgD by the small regulatory RNA RprA links stationary phase, biofilm formation and cell envelope stress in Escherichia coli. Mol Microbiol 2012; 84:51-65; PMID:22356413; http://dx.doi.org/10.1111/j.1365-2958.2012.08002. x.
    • (2012) Mol Microbiol , vol.84 , pp. 51-65
    • Mika, F.1    Busse, S.2    Possling, A.3    Berkholz, J.4    Tschowri, N.5    Sommerfeldt, N.6
  • 23
    • 84858862917 scopus 로고    scopus 로고
    • Small regulatory RNAs control the multi-cellular adhesive lifestyle of Escherichia coli
    • PMID:22250746
    • Jørgensen MG, Nielsen JS, Boysen A, Franch T, Møller-Jensen J, Valentin-Hansen P. Small regulatory RNAs control the multi-cellular adhesive lifestyle of Escherichia coli. Mol Microbiol 2012; 84:36-50; PMID:22250746; http://dx.doi.org/10.1111/j.1365- 2958.2012.07976.x.
    • (2012) Mol Microbiol , vol.84 , pp. 36-50
    • Jørgensen, M.G.1    Nielsen, J.S.2    Boysen, A.3    Franch, T.4    Møller-Jensen, J.5    Valentin-Hansen, P.6
  • 24
    • 69949101616 scopus 로고    scopus 로고
    • On the facultative requirement of the bacterial RNA chaperone, Hfq
    • PMID:19733080
    • Jousselin A, Metzinger L, Felden B. On the facultative requirement of the bacterial RNA chaperone, Hfq. Trends Microbiol 2009; 17:399-405; PMID:19733080; http://dx.doi.org/10.1016/j.tim.2009.06.003.
    • (2009) Trends Microbiol , vol.17 , pp. 399-405
    • Jousselin, A.1    Metzinger, L.2    Felden, B.3
  • 25
    • 79959486063 scopus 로고    scopus 로고
    • A highly conserved protein of unknown function in Sinorhizobium meliloti affects sRNA regulation similar to Hfq
    • PMID:21325267
    • Pandey SP, Minesinger BK, Kumar J, Walker GC. A highly conserved protein of unknown function in Sinorhizobium meliloti affects sRNA regulation similar to Hfq. Nucleic Acids Res 2011; 39:4691- 708; PMID:21325267; http://dx.doi.org/10. 1093/nar/ gkr060.
    • (2011) Nucleic Acids Res , vol.39 , pp. 4691-4708
    • Pandey, S.P.1    Minesinger, B.K.2    Kumar, J.3    Walker, G.C.4
  • 26
    • 80052299858 scopus 로고    scopus 로고
    • RodZ regulates the post-transcriptional processing of the Shigella sonnei type III secretion system
    • PMID:21779005
    • Mitobe J, Yanagihara I, Ohnishi K, Yamamoto S, Ohnishi M, Ishihama A, et al. RodZ regulates the post-transcriptional processing of the Shigella sonnei type III secretion system. EMBO Rep 2011; 12:911- 6; PMID:21779005; http://dx.doi.org/10.1038/ embor.2011.132.
    • (2011) EMBO Rep , vol.12 , pp. 911-916
    • Mitobe, J.1    Yanagihara, I.2    Ohnishi, K.3    Yamamoto, S.4    Ohnishi, M.5    Ishihama, A.6
  • 27
    • 84860716562 scopus 로고    scopus 로고
    • Experimental tools to identify RNA-protein interactions in Helicobacter pylori
    • In press
    • Rieder R, Reinhardt R, Sharma CM, Vogel J Experimental tools to identify RNA-protein interactions in Helicobacter pylori. RNA Biology 2012; 9:In press
    • (2012) RNA Biology , vol.9
    • Rieder, R.1    Reinhardt, R.2    Sharma, C.M.3    Vogel, J.4
  • 28
    • 23944475626 scopus 로고    scopus 로고
    • Mechanisms of, and barriers to, horizontal gene transfer between bacteria
    • PMID:16138099
    • Thomas CM, Nielsen KM. Mechanisms of, and barriers to, horizontal gene transfer between bacteria. Nat Rev Microbiol 2005; 3:711-21; PMID:16138099; http://dx.doi.org/10.1038/nrmicro1234.
    • (2005) Nat Rev Microbiol , vol.3 , pp. 711-721
    • Thomas, C.M.1    Nielsen, K.M.2
  • 29
    • 0028136885 scopus 로고
    • Bacterial gene transfer by natural genetic transformation in the environment
    • PMID:7968924
    • Lorenz MG, Wackernagel W. Bacterial gene transfer by natural genetic transformation in the environment. Microbiol Rev 1994; 58:563-602; PMID:7968924.
    • (1994) Microbiol Rev , vol.58 , pp. 563-602
    • Lorenz, M.G.1    Wackernagel, W.2
  • 31
    • 36148969305 scopus 로고    scopus 로고
    • A small non-coding RNA of the invasion gene island (SPI-1) represses outer membrane protein synthesis from the Salmonella core genome
    • PMID:17971080
    • Pfeiffer V, Sittka A, Tomer R, Tedin K, Brinkmann V, Vogel J. A small non-coding RNA of the invasion gene island (SPI-1) represses outer membrane protein synthesis from the Salmonella core genome. Mol Microbiol 2007; 66:1174-91; PMID:17971080; http://dx.doi.org/10.1111/j.1365-2958.2007.05991.x.
    • (2007) Mol Microbiol , vol.66 , pp. 1174-1191
    • Pfeiffer, V.1    Sittka, A.2    Tomer, R.3    Tedin, K.4    Brinkmann, V.5    Vogel, J.6
  • 32
    • 77951104433 scopus 로고    scopus 로고
    • Bacteriophage resistance mechanisms
    • PMID:20348932
    • Labrie SJ, Samson JE, Moineau S. Bacteriophage resistance mechanisms. Nat Rev Microbiol 2010; 8:317-27; PMID:20348932; http://dx.doi.org/10.1038/ nrmicro2315.
    • (2010) Nat Rev Microbiol , vol.8 , pp. 317-327
    • Labrie, S.J.1    Samson, J.E.2    Moineau, S.3
  • 33
    • 76949089832 scopus 로고    scopus 로고
    • Bacterial nucleoid-associated proteins, nucleoid structure and gene expression
    • PMID:20140026
    • Dillon SC, Dorman CJ. Bacterial nucleoid-associated proteins, nucleoid structure and gene expression. Nat Rev Microbiol 2010; 8:185-95; PMID:20140026; http://dx.doi.org/10.1038/nrmicro2261.
    • (2010) Nat Rev Microbiol , vol.8 , pp. 185-195
    • Dillon, S.C.1    Dorman, C.J.2
  • 34
    • 84857097177 scopus 로고    scopus 로고
    • RNAguided genetic silencing systems in bacteria and archaea
    • PMID:22337052
    • Wiedenheft B, Sternberg SH, Doudna JA. RNAguided genetic silencing systems in bacteria and archaea. Nature 2012; 482:331-8; PMID:22337052; http://dx.doi.org/10.1038/nature10886.
    • (2012) Nature , vol.482 , pp. 331-338
    • Wiedenheft, B.1    Sternberg, S.H.2    Doudna, J.A.3
  • 35
    • 79953250082 scopus 로고    scopus 로고
    • CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III
    • PMID:21455174
    • Deltcheva E, Chylinski K, Sharma CM, Gonzales K, Chao Y, Pirzada ZA, et al. CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III. Nature 2011; 471:602-7; PMID:21455174; http:// dx.doi.org/10.1038/nature09886.
    • (2011) Nature , vol.471 , pp. 602-607
    • Deltcheva, E.1    Chylinski, K.2    Sharma, C.M.3    Gonzales, K.4    Chao, Y.5    Pirzada, Z.A.6
  • 36
    • 72849114230 scopus 로고    scopus 로고
    • Prokaryotic transcriptomics: A new view on regulation, physiology and pathogenicity
    • PMID:19935729
    • Sorek R, Cossart P. Prokaryotic transcriptomics: a new view on regulation, physiology and pathogenicity. Nat Rev Genet 2010; 11:9-16; PMID:19935729; http:// dx.doi.org/10.1038/nrg2695.
    • (2010) Nat Rev Genet , vol.11 , pp. 9-16
    • Sorek, R.1    Cossart, P.2
  • 37
    • 77957802374 scopus 로고    scopus 로고
    • Studying bacterial transcriptomes using RNA-seq
    • PMID:20888288
    • Croucher NJ, Thomson NR, Trust W, Campus G. Studying bacterial transcriptomes using RNA-seq. Curr Opin Microbiol 2010; 13:619-24; PMID:20888288; http://dx.doi.org/10.1016/j.mib.2010.09.009.
    • (2010) Curr Opin Microbiol , vol.13 , pp. 619-624
    • Croucher, N.J.1    Thomson, N.R.2    Trust, W.3    Campus, G.4
  • 38
    • 84855836835 scopus 로고    scopus 로고
    • Deep sequencing uncovers numerous small RNAs on all four replicons of the plant pathogen Agrobacterium tumefaciens
    • PMID:22336765
    • Wilms I, Overlöper A, Nowrousian M, Sharma CM, Narberhaus F. Deep sequencing uncovers numerous small RNAs on all four replicons of the plant pathogen Agrobacterium tumefaciens. RNA Biol 2012; 9:In this issue; PMID:22336765.
    • (2012) RNA Biol , vol.9 , Issue.IN THIS ISSUE
    • Wilms, I.1    Overlöper, A.2    Nowrousian, M.3    Sharma, C.M.4    Narberhaus, F.5
  • 39
    • 84860771585 scopus 로고    scopus 로고
    • Deep sequencing defines the transcriptional map of L. pneumophila and identifies growth phase-dependent regulated ncRNAs implicated in virulence
    • Sahr T, Rusinok D, Dervins-Ravault O. Sismeiro; Jean- Yves, C & Carmen Buchrieser, C. Deep sequencing defines the transcriptional map of L. pneumophila and identifies growth phase-dependent regulated ncRNAs implicated in virulence. RNA Biol 2012; 9:In this issue.
    • (2012) RNA Biol , vol.9 , Issue.IN THIS ISSUE
    • Sahr, T.1    Rusinok, D.2    Sismeiro, D.O.3    Jean-Yves, C.4    Carmen Buchrieser, C.5
  • 40
    • 78149421813 scopus 로고    scopus 로고
    • Bacterial antisense RNAs: How many are there, and what are they doing?
    • PMID:20707673
    • Thomason MK, Storz G. Bacterial antisense RNAs: how many are there, and what are they doing? Annu Rev Genet 2010; 44:167-88; PMID:20707673; http:// dx.doi.org/10.1146/annurev-genet-102209-163523.
    • (2010) Annu Rev Genet , vol.44 , pp. 167-188
    • Thomason, M.K.1    Storz, G.2
  • 41
    • 84860757645 scopus 로고    scopus 로고
    • Dynamics of Salmonella small RNA expression in nongrowing bacteria located inside eukaryotic cells
    • PMID:22336761
    • Ortega A, Gonzalo-Asensio J, García-Del Portillo F. Dynamics of Salmonella small RNA expression in nongrowing bacteria located inside eukaryotic cells. RNA Biol 2012; 9:In this issue; PMID:22336761.
    • (2012) RNA Biol , vol.9 , Issue.IN THIS ISSUE
    • Ortega, A.1    Gonzalo-Asensio, J.2    García-Del Portillo, F.3
  • 42
    • 34250725542 scopus 로고    scopus 로고
    • Identification of bacterial small non-coding RNAs: experimental approaches
    • DOI 10.1016/j.mib.2007.05.003, PII S1369527407000501
    • Altuvia S. Identification of bacterial small non-coding RNAs: experimental approaches. Curr Opin Microbiol. 2007; 10:257-61 (Pubitemid 46963080)
    • (2007) Current Opinion in Microbiology , vol.10 , Issue.3 , pp. 257-261
    • Altuvia, S.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.