메뉴 건너뛰기




Volumn 9, Issue 4, 2012, Pages 520-531

Experimental tools to identify RNA-protein interactions in Helicobacter pylori

Author keywords

Affinity chromatography; Co immunoprecipitation; Helicobacter pylori; Hfq; Post transcriptional control; RNA binding proteins; RNA seq; Small RNA

Indexed keywords

APTAMER; RNA; TRANSFER RNA;

EID: 84860716562     PISSN: 15476286     EISSN: 15558584     Source Type: Journal    
DOI: 10.4161/rna.20331     Document Type: Article
Times cited : (22)

References (50)
  • 1
    • 0030835739 scopus 로고    scopus 로고
    • The complete genome sequence of the gastric pathogen Helicobacter pylori
    • PMID:9252185
    • Tomb JF, White O, Kerlavage AR, Clayton RA, Sutton GG, Fleischmann RD, et al. The complete genome sequence of the gastric pathogen Helicobacter pylori. Nature 1997; 388:539-47; PMID:9252185; http://dx.doi.org/10.1038/41483.
    • (1997) Nature , vol.388 , pp. 539-547
    • Tomb, J.F.1    White, O.2    Kerlavage, A.R.3    Clayton, R.A.4    Sutton, G.G.5    Fleischmann, R.D.6
  • 3
    • 75249100904 scopus 로고    scopus 로고
    • The role of Hfq in bacterial pathogens
    • PMID:20080057
    • Chao Y, Vogel J. The role of Hfq in bacterial pathogens. Curr Opin Microbiol 2010; 13:24-33; PMID:20080057; http://dx.doi.org/10.1016/j.mib.2010. 01.001.
    • (2010) Curr Opin Microbiol , vol.13 , pp. 24-33
    • Chao, Y.1    Vogel, J.2
  • 4
    • 79960433506 scopus 로고    scopus 로고
    • Hfq and its constellation of RNA
    • PMID:21760622
    • Vogel J, Luisi BF. Hfq and its constellation of RNA. Nat Rev Microbiol 2011; 9:578-89; PMID:21760622; http://dx.doi.org/10.1038/nrmicro2615.
    • (2011) Nat Rev Microbiol , vol.9 , pp. 578-589
    • Vogel, J.1    Luisi, B.F.2
  • 5
    • 35248861103 scopus 로고    scopus 로고
    • Efficient degradation and expression prioritization with small RNAs
    • PMID:17928655
    • Mitarai N, Andersson AM, Krishna S, Semsey S, Sneppen K. Efficient degradation and expression prioritization with small RNAs. Phys Biol 2007; 4:164-71; PMID:17928655; http://dx.doi. org/10.1088/1478-3975/4/3/003.
    • (2007) Phys Biol , vol.4 , pp. 164-171
    • Mitarai, N.1    Andersson, A.M.2    Krishna, S.3    Semsey, S.4    Sneppen, K.5
  • 6
    • 77949425194 scopus 로고    scopus 로고
    • The primary transcriptome of the major human pathogen Helicobacter pylori
    • PMID:20164839
    • Sharma CM, Hoffmann S, Darfeuille F, Reignier J, Findeiss S, Sittka A, et al. The primary transcriptome of the major human pathogen Helicobacter pylori. Nature 2010; 464:250-5; PMID:20164839; http://dx.doi.org/10.1038/nature08756.
    • (2010) Nature , vol.464 , pp. 250-255
    • Sharma, C.M.1    Hoffmann, S.2    Darfeuille, F.3    Reignier, J.4    Findeiss, S.5    Sittka, A.6
  • 7
    • 0141644746 scopus 로고    scopus 로고
    • Global analysis of small RNA and mRNA targets of Hfq
    • PMID:14622403
    • Zhang A, Wassarman KM, Rosenow C, Tjaden BC, Storz G, Gottesman S. Global analysis of small RNA and mRNA targets of Hfq. Mol Microbiol 2003; 50:1111-24; PMID:14622403; http://dx.doi. org/10.1046/j.1365-2958.2003.03734.x.
    • (2003) Mol Microbiol , vol.50 , pp. 1111-1124
    • Zhang, A.1    Wassarman, K.M.2    Rosenow, C.3    Tjaden, B.C.4    Storz, G.5    Gottesman, S.6
  • 8
    • 67349278437 scopus 로고    scopus 로고
    • Deep sequencing of Salmonella RNA associated with heterologous Hfq proteins in vivo reveals small RNAs as a major target class and identifies RNA processing phenotypes
    • PMID:19333007
    • Sittka A, Sharma CM, Rolle K, Vogel J. Deep sequencing of Salmonella RNA associated with heterologous Hfq proteins in vivo reveals small RNAs as a major target class and identifies RNA processing phenotypes. RNA Biol 2009; 6:266-75; PMID:19333007; http://dx.doi. org/10.4161/rna.6.3.8332.
    • (2009) RNA Biol , vol.6 , pp. 266-275
    • Sittka, A.1    Sharma, C.M.2    Rolle, K.3    Vogel, J.4
  • 9
    • 50849105413 scopus 로고    scopus 로고
    • Deep sequencing analysis of small noncoding RNA and mRNA targets of the global post-transcriptional regulator, Hfq
    • PMID:18725932
    • Sittka A, Lucchini S, Papenfort K, Sharma CM, Rolle K, Binnewies TT, et al. Deep sequencing analysis of small noncoding RNA and mRNA targets of the global post-transcriptional regulator, Hfq. PLoS Genet 2008; 4:e1000163; PMID:18725932; http://dx.doi. org/10.1371/journal.pgen.1000163.
    • (2008) PLoS Genet , vol.4
    • Sittka, A.1    Lucchini, S.2    Papenfort, K.3    Sharma, C.M.4    Rolle, K.5    Binnewies, T.T.6
  • 10
    • 80053019485 scopus 로고    scopus 로고
    • Regulation by small RNAs in bacteria: Expanding frontiers
    • PMID:21925377
    • Storz G, Vogel J, Wassarman KM. Regulation by small RNAs in bacteria: expanding frontiers. Mol Cell 2011; 43:880-91; PMID:21925377; http://dx.doi. org/10.1016/j.molcel.2011.08.022.
    • (2011) Mol Cell , vol.43 , pp. 880-891
    • Storz, G.1    Vogel, J.2    Wassarman, K.M.3
  • 11
    • 34547840265 scopus 로고    scopus 로고
    • Proteins that interact with bacterial small RNA regulators
    • PMID:17655690
    • Pichon C, Felden B. Proteins that interact with bacterial small RNA regulators. FEMS Microbiol Rev 2007; 31:614-25; PMID:17655690; http://dx.doi. org/10.1111/j.1574-6976.2007.00079.x.
    • (2007) FEMS Microbiol Rev , vol.31 , pp. 614-625
    • Pichon, C.1    Felden, B.2
  • 12
    • 34247169597 scopus 로고    scopus 로고
    • CsrB sRNA family: Sequestration of RNA-binding regulatory proteins
    • PMID:17383221
    • Babitzke P, Romeo T. CsrB sRNA family: sequestration of RNA-binding regulatory proteins. Curr Opin Microbiol 2007; 10:156-63; PMID:17383221; http:// dx.doi.org/10.1016/j.mib.2007.03.007.
    • (2007) Curr Opin Microbiol , vol.10 , pp. 156-163
    • Babitzke, P.1    Romeo, T.2
  • 13
    • 77956781439 scopus 로고    scopus 로고
    • Post-transcriptional global regulation by CsrA in bacteria
    • PMID:20446015
    • Timmermans J, Van Melderen L. Post-transcriptional global regulation by CsrA in bacteria. Cell Mol Life Sci 2010; 67:2897-908; PMID:20446015; http://dx.doi. org/10.1007/s00018-010-0381-z.
    • (2010) Cell Mol Life Sci , vol.67 , pp. 2897-2908
    • Timmermans, J.1    Van Melderen, L.2
  • 14
    • 0348225097 scopus 로고    scopus 로고
    • Global regulation of virulence and the stress response by CsrA in the highly adapted human gastric pathogen Helicobacter pylori
    • PMID:14651608
    • Barnard FM, Loughlin MF, Fainberg HP, Messenger MP, Ussery DW, Williams P, et al. Global regulation of virulence and the stress response by CsrA in the highly adapted human gastric pathogen Helicobacter pylori. Mol Microbiol 2004; 51:15-32; PMID:14651608; http://dx.doi.org/10.1046/j.1365-2958.2003.03788.x.
    • (2004) Mol Microbiol , vol.51 , pp. 15-32
    • Barnard, F.M.1    Loughlin, M.F.2    Fainberg, H.P.3    Messenger, M.P.4    Ussery, D.W.5    Williams, P.6
  • 15
    • 57349195602 scopus 로고    scopus 로고
    • Posttranscriptional regulation of flagellin synthesis in Helicobacter pylori by the RpoN chaperone HP0958
    • PMID:18931105
    • Douillard FP, Ryan KA, Caly DL, Hinds J, Witney AA, Husain SE, et al. Posttranscriptional regulation of flagellin synthesis in Helicobacter pylori by the RpoN chaperone HP0958. J Bacteriol 2008; 190:7975-84; PMID:18931105; http://dx.doi.org/10.1128/ JB.00879-08.
    • (2008) J Bacteriol , vol.190 , pp. 7975-7984
    • Douillard, F.P.1    Ryan, K.A.2    Caly, D.L.3    Hinds, J.4    Witney, A.A.5    Husain, S.E.6
  • 16
    • 56849098856 scopus 로고    scopus 로고
    • Transtranslation in Helicobacter pylori: Essentiality of ribosome rescue and requirement of protein tagging for stress resistance and competence
    • PMID:19043582
    • Thibonnier M, Thiberge JM, De Reuse H. Transtranslation in Helicobacter pylori: essentiality of ribosome rescue and requirement of protein tagging for stress resistance and competence. PLoS One 2008; 3:e3810; PMID:19043582; http://dx.doi.org/10.1371/journal.pone.0003810.
    • (2008) PLoS One , vol.3
    • Thibonnier, M.1    Thiberge, J.M.2    De Reuse, H.3
  • 17
    • 77951915330 scopus 로고    scopus 로고
    • Study of the functionality of the Helicobacter pylori trans-translation components SmpB and SsrA in an heterologous system
    • PMID:20346161
    • Thibonnier M, Aubert S, Ecobichon C, De Reuse H. Study of the functionality of the Helicobacter pylori trans-translation components SmpB and SsrA in an heterologous system. BMC Microbiol 2010; 10:91; PMID:20346161; http://dx.doi.org/10.1186/1471-2180-10-91.
    • (2010) BMC Microbiol , vol.10 , pp. 91
    • Thibonnier, M.1    Aubert, S.2    Ecobichon, C.3    De Reuse, H.4
  • 18
    • 84855916545 scopus 로고    scopus 로고
    • Protein- RNA interactions: New genomic technologies and perspectives
    • PMID:22251872
    • König J, Zarnack K, Luscombe NM, Ule J. Protein- RNA interactions: new genomic technologies and perspectives. Nat Rev Genet 2012; 13:77-83; PMID:22251872; http://dx.doi.org/10.1038/nrg3141.
    • (2012) Nat Rev Genet , vol.13 , pp. 77-83
    • König, J.1    Zarnack, K.2    Luscombe, N.M.3    Ule, J.4
  • 19
    • 85046912592 scopus 로고    scopus 로고
    • Isolation of small RNA-binding proteins from E. coli: Evidence for frequent interaction of RNAs with RNA polymerase
    • PMID:18388495
    • Windbichler N, von Pelchrzim F, Mayer O, Csaszar E, Schroeder R. Isolation of small RNA-binding proteins from E. coli: evidence for frequent interaction of RNAs with RNA polymerase. RNA Biol 2008; 5:30-40; PMID:18388495; http://dx.doi.org/10.4161/rna.5.1.5694.
    • (2008) RNA Biol , vol.5 , pp. 30-40
    • Windbichler, N.1    Von Pelchrzim, F.2    Mayer, O.3    Csaszar, E.4    Schroeder, R.5
  • 20
    • 76149125466 scopus 로고    scopus 로고
    • In vivo expression and purification of aptamer-tagged small RNA regulators
    • PMID:19726584
    • Said N, Rieder R, Hurwitz R, Deckert J, Urlaub H, Vogel J. In vivo expression and purification of aptamer-tagged small RNA regulators. Nucleic Acids Res 2009; 37:e133; PMID:19726584; http://dx.doi. org/10.1093/nar/gkp719.
    • (2009) Nucleic Acids Res , vol.37
    • Said, N.1    Rieder, R.2    Hurwitz, R.3    Deckert, J.4    Urlaub, H.5    Vogel, J.6
  • 21
    • 0037126061 scopus 로고    scopus 로고
    • Purification and electron microscopic visualization of functional human spliceosomes
    • PMID:12215496
    • Zhou Z, Sim J, Griffith J, Reed R. Purification and electron microscopic visualization of functional human spliceosomes. Proc Natl Acad Sci U S A 2002; 99:12203-7; PMID:12215496; http://dx.doi. org/10.1073/pnas.182427099.
    • (2002) Proc Natl Acad Sci U S A , vol.99 , pp. 12203-12207
    • Zhou, Z.1    Sim, J.2    Griffith, J.3    Reed, R.4
  • 22
    • 0035910078 scopus 로고    scopus 로고
    • Epitope tagging of chromosomal genes in Salmonella
    • PMID:11742086
    • Uzzau S, Figueroa-Bossi N, Rubino S, Bossi L. Epitope tagging of chromosomal genes in Salmonella. Proc Natl Acad Sci U S A 2001; 98:15264-9; PMID:11742086; http://dx.doi.org/10.1073/pnas.261348198.
    • (2001) Proc Natl Acad Sci U S A , vol.98 , pp. 15264-15269
    • Uzzau, S.1    Figueroa-Bossi, N.2    Rubino, S.3    Bossi, L.4
  • 23
    • 0034625237 scopus 로고    scopus 로고
    • 6S RNA regulates E. coli RNA polymerase activity
    • PMID:10892648
    • Wassarman KM, Storz G. 6S RNA regulates E. coli RNA polymerase activity. Cell 2000; 101:613-23; PMID:10892648; http://dx.doi.org/10.1016/S0092- 8674(00)80873-9.
    • (2000) Cell , vol.101 , pp. 613-623
    • Wassarman, K.M.1    Storz, G.2
  • 24
    • 34548749823 scopus 로고    scopus 로고
    • Isolation of specific RNA-binding proteins using the streptomycinbinding RNA aptamer
    • PMID:17406291
    • Windbichler N, Schroeder R. Isolation of specific RNA-binding proteins using the streptomycinbinding RNA aptamer. Nat Protoc 2006; 1:637- 40; PMID:17406291; http://dx.doi.org/10.1038/ nprot.2006.95.
    • (2006) Nat Protoc , vol.1 , pp. 637-640
    • Windbichler, N.1    Schroeder, R.2
  • 25
    • 13444283630 scopus 로고    scopus 로고
    • Interaction network containing conserved and essential protein complexes in Escherichia coli
    • PMID:15690043
    • Butland G, Peregrín-Alvarez JM, Li J, Yang W, Yang X, Canadien V, et al. Interaction network containing conserved and essential protein complexes in Escherichia coli. Nature 2005; 433:531-7; PMID:15690043; http://dx.doi.org/ 10.1038/nature03239.
    • (2005) Nature , vol.433 , pp. 531-537
    • Butland, G.1    Peregrín-Alvarez, J.M.2    Li, J.3    Yang, W.4    Yang, X.5    Canadien, V.6
  • 26
    • 56849102578 scopus 로고    scopus 로고
    • In vivo interactome of Helicobacter pylori urease revealed by tandem affinity purification
    • PMID:18682379
    • Stingl K, Schauer K, Ecobichon C, Labigne A, Lenormand P, Rousselle JC, et al. In vivo interactome of Helicobacter pylori urease revealed by tandem affinity purification. Mol Cell Proteomics 2008; 7:2429-41; PMID:18682379; http://dx.doi.org/10.1074/mcp. M800160-MCP200.
    • (2008) Mol Cell Proteomics , vol.7 , pp. 2429-2441
    • Stingl, K.1    Schauer, K.2    Ecobichon, C.3    Labigne, A.4    Lenormand, P.5    Rousselle, J.C.6
  • 27
    • 0032563095 scopus 로고    scopus 로고
    • Ribosomal protein S1 is required for translation of most, if not all, natural mRNAs in Escherichia coli in vivo
    • PMID:9677288
    • Sørensen MA, Fricke J, Pedersen S. Ribosomal protein S1 is required for translation of most, if not all, natural mRNAs in Escherichia coli in vivo. J Mol Biol 1998; 280:561-9; PMID:9677288; http://dx.doi. org/10.1006/jmbi.1998.1909.
    • (1998) J Mol Biol , vol.280 , pp. 561-569
    • Sørensen, M.A.1    Fricke, J.2    Pedersen, S.3
  • 28
    • 84860730931 scopus 로고    scopus 로고
    • Multiple activities of RNAbinding proteins S1 and Hfq
    • In press; PMID:22370051
    • Hajnsdorf E, Boni IV. Multiple activities of RNAbinding proteins S1 and Hfq. Biochimie 2012; In press; PMID:22370051; http://dx.doi.org/10.1016/j. biochi.2012.02.010.
    • (2012) Biochimie
    • Hajnsdorf, E.1    Boni, I.V.2
  • 29
    • 33746525428 scopus 로고    scopus 로고
    • Ribosomal protein S1 promotes transcriptional cycling
    • PMID:16775305
    • Sukhodolets MV, Garges S, Adhya S. Ribosomal protein S1 promotes transcriptional cycling. RNA 2006; 12:1505-13; PMID:16775305; http://dx.doi. org/10.1261/rna.2321606.
    • (2006) RNA , vol.12 , pp. 1505-1513
    • Sukhodolets, M.V.1    Garges, S.2    Adhya, S.3
  • 30
    • 80053181098 scopus 로고    scopus 로고
    • S1 ribosomal protein and the interplay between translation and mRNA decay
    • PMID:21685451
    • Delvillani F, Papiani G, Dehò G, Briani F. S1 ribosomal protein and the interplay between translation and mRNA decay. Nucleic Acids Res 2011; 39:7702- 15; PMID:21685451; http://dx.doi.org/10.1093/nar/ gkr417.
    • (2011) Nucleic Acids Res , vol.39 , pp. 7702-7715
    • Delvillani, F.1    Papiani, G.2    Dehò, G.3    Briani, F.4
  • 31
    • 55549110097 scopus 로고    scopus 로고
    • Polynucleotide phosphorylase hinders mRNA degradation upon ribosomal protein S1 overexpression in Escherichia coli
    • PMID:18824515
    • Briani F, Curti S, Rossi F, Carzaniga T, Mauri P, Dehò G. Polynucleotide phosphorylase hinders mRNA degradation upon ribosomal protein S1 overexpression in Escherichia coli. RNA 2008; 14:2417-29; PMID:18824515; http://dx.doi.org/10.1261/ rna.1123908.
    • (2008) RNA , vol.14 , pp. 2417-2429
    • Briani, F.1    Curti, S.2    Rossi, F.3    Carzaniga, T.4    Mauri, P.5    Dehò, G.6
  • 32
    • 0037709369 scopus 로고    scopus 로고
    • Interaction of Escherichia coli RNA polymerase with the ribosomal protein S1 and the Sm-like ATPase Hfq
    • PMID:12834354
    • Sukhodolets MV, Garges S. Interaction of Escherichia coli RNA polymerase with the ribosomal protein S1 and the Sm-like ATPase Hfq. Biochemistry 2003; 42:8022-34; PMID:12834354; http://dx.doi. org/10.1021/bi020638i.
    • (2003) Biochemistry , vol.42 , pp. 8022-8034
    • Sukhodolets, M.V.1    Garges, S.2
  • 33
    • 0035943737 scopus 로고    scopus 로고
    • Escherichia coli poly(A)-binding proteins that interact with components of degradosomes or impede RNA decay mediated by polynucleotide phosphorylase and RNase E
    • PMID:11390393
    • Feng Y, Huang H, Liao J, Cohen SN. Escherichia coli poly(A)-binding proteins that interact with components of degradosomes or impede RNA decay mediated by polynucleotide phosphorylase and RNase E. J Biol Chem 2001; 276:31651-6; PMID:11390393; http:// dx.doi.org/10.1074/jbc.M102855200.
    • (2001) J Biol Chem , vol.276 , pp. 31651-31656
    • Feng, Y.1    Huang, H.2    Liao, J.3    Cohen, S.N.4
  • 34
    • 0035843145 scopus 로고    scopus 로고
    • The protein-protein interaction map of Helicobacter pylori
    • PMID:11196647
    • Rain JC, Selig L, De Reuse H, Battaglia V, Reverdy C, Simon S, et al. The protein-protein interaction map of Helicobacter pylori. Nature 2001; 409:211-5; PMID:11196647; http://dx.doi. org/10.1038/35051615.
    • (2001) Nature , vol.409 , pp. 211-215
    • Rain, J.C.1    Selig, L.2    De Reuse, H.3    Battaglia, V.4    Reverdy, C.5    Simon, S.6
  • 35
    • 77955412028 scopus 로고    scopus 로고
    • What is the role of RNase J in mRNA turnover?
    • PMID:20458164
    • Condon C. What is the role of RNase J in mRNA turnover? RNA Biol 2010; 7:316-21; PMID:20458164; http://dx.doi.org/10.4161/rna.7.3.11913.
    • (2010) RNA Biol , vol.7 , pp. 316-321
    • Condon, C.1
  • 36
    • 0031576897 scopus 로고    scopus 로고
    • Recognition of bacteriophage Qbeta plus strand RNA as a template by Qbeta replicase: Role of RNA interactions mediated by ribosomal proteins S1 and host factor
    • PMID:9150398
    • Miranda G, Schuppli D, Barrera I, Hausherr C, Sogo JM, Weber H. Recognition of bacteriophage Qbeta plus strand RNA as a template by Qbeta replicase: role of RNA interactions mediated by ribosomal proteins S1 and host factor. J Mol Biol 1997; 267:1089- 103; PMID:9150398; http://dx.doi.org/10.1006/ jmbi.1997.0939.
    • (1997) J Mol Biol , vol.267 , pp. 1089-1103
    • Miranda, G.1    Schuppli, D.2    Barrera, I.3    Hausherr, C.4    Sogo, J.M.5    Weber, H.6
  • 37
    • 64049083937 scopus 로고    scopus 로고
    • RNA processing and decay in bacteriophage T4
    • PMID:19215770
    • Uzan M. RNA processing and decay in bacteriophage T4. Prog Mol Biol Transl Sci 2009; 85:43-89; PMID:19215770; http://dx.doi.org/10.1016/S0079- 6603(08)00802-7.
    • (2009) Prog Mol Biol Transl Sci , vol.85 , pp. 43-89
    • Uzan, M.1
  • 38
    • 36249019206 scopus 로고    scopus 로고
    • Dissecting RNA chaperone activity
    • PMID:17901153
    • Rajkowitsch L, Schroeder R. Dissecting RNA chaperone activity. RNA 2007; 13:2053-60; PMID:17901153; http://dx.doi.org/10.1261/rna.671807.
    • (2007) RNA , vol.13 , pp. 2053-2060
    • Rajkowitsch, L.1    Schroeder, R.2
  • 39
    • 70449698466 scopus 로고    scopus 로고
    • Probing the relationship between Gram-negative and Gram-positive S1 proteins by sequence analysis
    • PMID:19605565
    • Salah P, Bisaglia M, Aliprandi P, Uzan M, Sizun C, Bontems F. Probing the relationship between Gram-negative and Gram-positive S1 proteins by sequence analysis. Nucleic Acids Res 2009; 37:5578-88; PMID:19605565; http://dx.doi.org/10.1093/nar/gkp547.
    • (2009) Nucleic Acids Res , vol.37 , pp. 5578-5588
    • Salah, P.1    Bisaglia, M.2    Aliprandi, P.3    Uzan, M.4    Sizun, C.5    Bontems, F.6
  • 40
    • 0020671323 scopus 로고
    • Structure and functions of ribosomal protein S1
    • PMID:6348874
    • Subramanian AR. Structure and functions of ribosomal protein S1. Prog Nucleic Acid Res Mol Biol 1983; 28:101-42; PMID:6348874; http://dx.doi. org/10.1016/S0079-6603(08)60085-9.
    • (1983) Prog Nucleic Acid Res Mol Biol , vol.28 , pp. 101-142
    • Subramanian, A.R.1
  • 41
    • 0344668787 scopus 로고    scopus 로고
    • A key role for the mRNA leader structure in translational control of ribosomal protein S1 synthesis in gamma-proteobacteria
    • PMID:14627832
    • Tchufistova LS, Komarova AV, Boni IV. A key role for the mRNA leader structure in translational control of ribosomal protein S1 synthesis in gamma-proteobacteria. Nucleic Acids Res 2003; 31:6996-7002; PMID:14627832; http://dx.doi.org/10.1093/nar/gkg883.
    • (2003) Nucleic Acids Res , vol.31 , pp. 6996-7002
    • Tchufistova, L.S.1    Komarova, A.V.2    Boni, I.V.3
  • 42
    • 9244239747 scopus 로고    scopus 로고
    • Global transposon mutagenesis and essential gene analysis of Helicobacter pylori
    • PMID:15547264
    • Salama NR, Shepherd B, Falkow S. Global transposon mutagenesis and essential gene analysis of Helicobacter pylori. J Bacteriol 2004; 186:7926- 35; PMID:15547264; http://dx.doi.org/10.1128/ JB.186.23.7926-7935.2004.
    • (2004) J Bacteriol , vol.186 , pp. 7926-7935
    • Salama, N.R.1    Shepherd, B.2    Falkow, S.3
  • 43
    • 0028960633 scopus 로고
    • The Bacillus subtilis chromosome region encoding homologues of the Escherichia coli mssA and rpsA gene products
    • PMID:7704259
    • Sorokin A, Serror P, Pujic P, Azevedo V, Ehrlich SD. The Bacillus subtilis chromosome region encoding homologues of the Escherichia coli mssA and rpsA gene products. Microbiology 1995; 141:311-9; PMID:7704259; http://dx.doi.org/10.1099/13500872-141-2-311.
    • (1995) Microbiology , vol.141 , pp. 311-319
    • Sorokin, A.1    Serror, P.2    Pujic, P.3    Azevedo, V.4    Ehrlich, S.D.5
  • 44
    • 0019937956 scopus 로고
    • An amber mutation in the gene rpsA for ribosomal protein S1 in Escherichia coli
    • PMID:6212755
    • Kitakawa M, Isono K. An amber mutation in the gene rpsA for ribosomal protein S1 in Escherichia coli. Mol Gen Genet 1982; 185:445-7; PMID:6212755; http:// dx.doi.org/10.1007/BF00334137.
    • (1982) Mol Gen Genet , vol.185 , pp. 445-447
    • Kitakawa, M.1    Isono, K.2
  • 45
    • 0031661885 scopus 로고    scopus 로고
    • The Helicobacter pylori UreI protein is not involved in urease activity but is essential for bacterial survival in vivo
    • PMID:9712811
    • Skouloubris S, Thiberge JM, Labigne A, De Reuse H. The Helicobacter pylori UreI protein is not involved in urease activity but is essential for bacterial survival in vivo. Infect Immun 1998; 66:4517-21; PMID:9712811.
    • (1998) Infect Immun , vol.66 , pp. 4517-4521
    • Skouloubris, S.1    Thiberge, J.M.2    Labigne, A.3    De Reuse, H.4
  • 46
    • 0032982703 scopus 로고    scopus 로고
    • Essential role of Helicobacter pylori gamma-glutamyltranspeptidase for the colonization of the gastric mucosa of mice
    • PMID:10200957
    • Chevalier C, Thiberge JM, Ferrero RL, Labigne A. Essential role of Helicobacter pylori gamma-glutamyltranspeptidase for the colonization of the gastric mucosa of mice. Mol Microbiol 1999; 31:1359-72; PMID:10200957; http://dx.doi.org/10.1046/j.1365- 2958.1999.01271.x.
    • (1999) Mol Microbiol , vol.31 , pp. 1359-1372
    • Chevalier, C.1    Thiberge, J.M.2    Ferrero, R.L.3    Labigne, A.4
  • 47
    • 33845713571 scopus 로고    scopus 로고
    • The RNA chaperone Hfq is essential for the virulence of Salmonella typhimurium
    • PMID:17163975
    • Sittka A, Pfeiffer V, Tedin K, Vogel J. The RNA chaperone Hfq is essential for the virulence of Salmonella typhimurium. Mol Microbiol 2007; 63:193-217; PMID:17163975; http://dx.doi.org/10.1111/j.1365-2958.2006.05489.x.
    • (2007) Mol Microbiol , vol.63 , pp. 193-217
    • Sittka, A.1    Pfeiffer, V.2    Tedin, K.3    Vogel, J.4
  • 48
  • 49
    • 70349667200 scopus 로고    scopus 로고
    • Fast mapping of short sequences with mismatches, insertions and deletions using index structures
    • PMID:19750212
    • Hoffmann S, Otto C, Kurtz S, Sharma CM, Khaitovich P, Vogel J, et al. Fast mapping of short sequences with mismatches, insertions and deletions using index structures. PLoS Comput Biol 2009; 5:e1000502; PMID:19750212; http://dx.doi.org/10.1371/journal. pcbi.1000502.
    • (2009) PLoS Comput Biol , vol.5
    • Hoffmann, S.1    Otto, C.2    Kurtz, S.3    Sharma, C.M.4    Khaitovich, P.5    Vogel, J.6
  • 50
    • 0025312701 scopus 로고
    • Analysis by high-resolution two-dimensional electrophoresis of differentiation-dependent alterations in cytosolic protein pattern of HL-60 leukemic cells
    • PMID:1698848
    • Jungblut PR, Seifert R. Analysis by high-resolution two-dimensional electrophoresis of differentiation-dependent alterations in cytosolic protein pattern of HL-60 leukemic cells. J Biochem Biophys Methods 1990; 21:47-58; PMID:1698848; http://dx.doi. org/10.1016/0165-022X(90)90044-D.
    • (1990) J Biochem Biophys Methods , vol.21 , pp. 47-58
    • Jungblut, P.R.1    Seifert, R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.