Spectral clustering in peptidomics studies allows homology searching and modification profiling: HomClus, a versatile tool

Journal of Proteome Research

Volumn 11, Issue 5, 2012, Pages 2774-2785

  Menschaert, Gerben ^a,b   Hayakawa, Eisuke ^b   Schoofs, Liliane ^b   Van Criekinge, Wim ^a   Baggerman, Geert ^c,d  

^a GHENT UNIVERSITY   (Belgium)

^b UNIVERSITY OF LEUVEN   (Belgium)

^c FLEMISH INSTITUTE FOR TECHNOLOGICAL RESEARCH VITO   (Belgium)

^d Center for Proteomics   (Belgium)

Author keywords

bioactive peptides; homology searching; Locusta migratoria; peptidomics; post translational modification; PTMs; Schistocerca gregaria; spectral clustering

Indexed keywords

ALGORITHM; AMINO ACID SUBSTITUTION; ARTICLE; CLUSTER ANALYSIS; DATA BASE; FRAGMENTATION REACTION; GENE EXPRESSION PROFILING; LIQUID CHROMATOGRAPHY; LOCUST; MATRIX ASSISTED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; NONHUMAN; PEPTIDOMICS; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN MODIFICATION; PROTEIN PROCESSING; SEQUENCE HOMOLOGY;

ALGORITHMS; AMINO ACID SEQUENCE; ANIMALS; DATABASES, PROTEIN; DROSOPHILA MELANOGASTER; INSECT PROTEINS; LOCUSTA MIGRATORIA; MOLECULAR SEQUENCE ANNOTATION; MOLECULAR SEQUENCE DATA; PEPTIDES; PROTEIN PROCESSING, POST-TRANSLATIONAL; PROTEOMICS; SEARCH ENGINE; SEQUENCE ANALYSIS, PROTEIN; SEQUENCE HOMOLOGY, AMINO ACID; SOFTWARE; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION;

DROSOPHILA MELANOGASTER; LOCUSTA MIGRATORIA; ORTHOPTERA; SCHISTOCERCA GREGARIA;

EID: 84860624398     PISSN: 15353893     EISSN: 15353907     Source Type: Journal    
DOI: 10.1021/pr201114m     Document Type: Article

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