메뉴 건너뛰기




Volumn 7, Issue 4, 2012, Pages

Characterization of a novel ArsR-like regulator encoded by Rv2034 in mycobacterium tuberculosis

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; AUTOREGULATION; BINDING SITE; DNA FOOTPRINTING; DNA SEQUENCE; EVOLUTIONARY ADAPTATION; GENE EXPRESSION PROFILING; GENE TARGETING; IN VITRO STUDY; LIPID METABOLISM; MYCOBACTERIUM TUBERCULOSIS; NONHUMAN; PROMOTER REGION; PROTEIN DNA BINDING; TRANSCRIPTION REGULATION; CHEMISTRY; ENZYME SPECIFICITY; GENE EXPRESSION REGULATION; GENETICS; INVERTED REPEAT; METABOLISM; MOLECULAR GENETICS; NUCLEOTIDE MOTIF; NUCLEOTIDE SEQUENCE; PROTEIN MULTIMERIZATION; PROTEIN QUATERNARY STRUCTURE;

EID: 84860467728     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0036255     Document Type: Article
Times cited : (44)

References (41)
  • 1
    • 79955103273 scopus 로고    scopus 로고
    • World Health Organization, Geneva, World Health Organization
    • World Health Organization (2010) Global tuberculosis control WHO report 2010 Geneva World Health Organization.
    • (2010) Global Tuberculosis Control WHO Report 2010
  • 2
    • 33847704942 scopus 로고    scopus 로고
    • Challenges in tuberculosis drug research and development
    • doi:10.1038/nm0307-290
    • Ginsberg AM, Spigelman M, (2007) Challenges in tuberculosis drug research and development. Nat Med 13: 290-294 doi:10.1038/nm0307-290.
    • (2007) Nat Med , vol.13 , pp. 290-294
    • Ginsberg, A.M.1    Spigelman, M.2
  • 3
    • 67650132403 scopus 로고    scopus 로고
    • Hypoxia: a window into Mycobacterium tuberculosis latency
    • doi:10.1111/j.1462-5822.2009.01325.x
    • Rustad TR, Sherrid AM, Minch KJ, Sherman DR, (2009) Hypoxia: a window into Mycobacterium tuberculosis latency. Cell Microbiol 11: 1151-1159 doi:10.1111/j.1462-5822.2009.01325.x.
    • (2009) Cell Microbiol , vol.11 , pp. 1151-1159
    • Rustad, T.R.1    Sherrid, A.M.2    Minch, K.J.3    Sherman, D.R.4
  • 4
    • 7944221099 scopus 로고    scopus 로고
    • What do microarrays really tell us about M. tuberculosis?
    • doi:10.1016/j.tim.2004.10.005
    • Kendall SL, Rison SCG, Movahedzadeh F, Frita R, Stoker NG, (2004) What do microarrays really tell us about M. tuberculosis? Trends Microbiol 12: 537-544 doi:10.1016/j.tim.2004.10.005.
    • (2004) Trends Microbiol , vol.12 , pp. 537-544
    • Kendall, S.L.1    Rison, S.C.G.2    Movahedzadeh, F.3    Frita, R.4    Stoker, N.G.5
  • 5
    • 8444225798 scopus 로고    scopus 로고
    • Cell biology of mycobacterium tuberculosis phagosome
    • doi:10.1146/annurev.cellbio.20.010403.114015
    • Vergne I, Chua J, Singh SB, Deretic V, (2004) Cell biology of mycobacterium tuberculosis phagosome. Annu Rev Cell Dev Biol 20: 367-394 doi:10.1146/annurev.cellbio.20.010403.114015.
    • (2004) Annu Rev Cell Dev Biol , vol.20 , pp. 367-394
    • Vergne, I.1    Chua, J.2    Singh, S.B.3    Deretic, V.4
  • 6
    • 0038349268 scopus 로고    scopus 로고
    • Rv3133c/dosR is a transcription factor that mediates the hypoxic response of Mycobacterium tuberculosis
    • Park H-D, Guinn KM, Harrell MI, Liao R, Voskuil MI, et al. (2003) Rv3133c/dosR is a transcription factor that mediates the hypoxic response of Mycobacterium tuberculosis. Mol Microbiol 48: 833-843.
    • (2003) Mol Microbiol , vol.48 , pp. 833-843
    • Park, H.-D.1    Guinn, K.M.2    Harrell, M.I.3    Liao, R.4    Voskuil, M.I.5
  • 7
    • 80052535188 scopus 로고    scopus 로고
    • Comprehensive insights into Mycobacterium tuberculosis DevR (DosR) regulon activation switch
    • doi:10.1093/nar/gkr375
    • Chauhan S, Sharma D, Singh A, Surolia A, Tyagi JS, (2011) Comprehensive insights into Mycobacterium tuberculosis DevR (DosR) regulon activation switch. Nucleic Acids Res 39: 7400-7414 doi:10.1093/nar/gkr375.
    • (2011) Nucleic Acids Res , vol.39 , pp. 7400-7414
    • Chauhan, S.1    Sharma, D.2    Singh, A.3    Surolia, A.4    Tyagi, J.S.5
  • 8
    • 43049182981 scopus 로고    scopus 로고
    • The enduring hypoxic response of Mycobacterium tuberculosis
    • doi:10.1371/journal.pone.0001502
    • Rustad TR, Harrell MI, Liao R, Sherman DR, (2008) The enduring hypoxic response of Mycobacterium tuberculosis. PLoS ONE 3: e1502 doi:10.1371/journal.pone.0001502.
    • (2008) PLoS ONE , vol.3
    • Rustad, T.R.1    Harrell, M.I.2    Liao, R.3    Sherman, D.R.4
  • 10
    • 80051570211 scopus 로고    scopus 로고
    • An ArsR-like transcriptional factor recognizes a conserved sequence motif and positively regulates the expression of phoP in mycobacteria
    • doi:10.1016/j.bbrc.2011.07.014
    • Gao C-H, Yang M, He Z-G, (2011) An ArsR-like transcriptional factor recognizes a conserved sequence motif and positively regulates the expression of phoP in mycobacteria. Biochem Biophys Res Commun 411: 726-731 doi:10.1016/j.bbrc.2011.07.014.
    • (2011) Biochem Biophys Res Commun , vol.411 , pp. 726-731
    • Gao, C.-H.1    Yang, M.2    He, Z.-G.3
  • 11
    • 34548504554 scopus 로고    scopus 로고
    • BigR, a Transcriptional Repressor from Plant-Associated Bacteria, Regulates an Operon Implicated in Biofilm Growth
    • doi:10.1128/JB.00331-07
    • Barbosa RL, Benedetti CE, (2007) BigR, a Transcriptional Repressor from Plant-Associated Bacteria, Regulates an Operon Implicated in Biofilm Growth. J Bacteriol 189: 6185-6194 doi:10.1128/JB.00331-07.
    • (2007) J Bacteriol , vol.189 , pp. 6185-6194
    • Barbosa, R.L.1    Benedetti, C.E.2
  • 12
    • 67650457613 scopus 로고    scopus 로고
    • CmtR, a cadmium-sensing ArsR-SmtB repressor, cooperatively interacts with multiple operator sites to autorepress its transcription in Mycobacterium tuberculosis
    • doi:10.1111/j.1742-4658.2009.07066.x
    • Chauhan S, Kumar A, Singhal A, Tyagi JS, Prasad HK, (2009) CmtR, a cadmium-sensing ArsR-SmtB repressor, cooperatively interacts with multiple operator sites to autorepress its transcription in Mycobacterium tuberculosis. FEBS Journal 276: 3428-3439 doi:10.1111/j.1742-4658.2009.07066.x.
    • (2009) FEBS Journal , vol.276 , pp. 3428-3439
    • Chauhan, S.1    Kumar, A.2    Singhal, A.3    Tyagi, J.S.4    Prasad, H.K.5
  • 13
    • 34247580135 scopus 로고    scopus 로고
    • Crystal structure of the archaeal heat shock regulator from Pyrococcus furiosus: a molecular chimera representing eukaryal and bacterial features
    • doi:10.1016/j.jmb.2007.03.044
    • Liu W, Vierke G, Wenke A-K, Thomm M, Ladenstein R, (2007) Crystal structure of the archaeal heat shock regulator from Pyrococcus furiosus: a molecular chimera representing eukaryal and bacterial features. J Mol Biol 369: 474-488 doi:10.1016/j.jmb.2007.03.044.
    • (2007) J Mol Biol , vol.369 , pp. 474-488
    • Liu, W.1    Vierke, G.2    Wenke, A.-K.3    Thomm, M.4    Ladenstein, R.5
  • 14
    • 70350440306 scopus 로고    scopus 로고
    • The ArsR Repressor Mediates Arsenite-Dependent Regulation of Arsenate Respiration and Detoxification Operons of Shewanella sp. Strain ANA-3
    • doi:10.1128/JB.00801-09
    • Murphy JN, Saltikov CW, (2009) The ArsR Repressor Mediates Arsenite-Dependent Regulation of Arsenate Respiration and Detoxification Operons of Shewanella sp. Strain ANA-3. J Bacteriol 191: 6722-6731 doi:10.1128/JB.00801-09.
    • (2009) J Bacteriol , vol.191 , pp. 6722-6731
    • Murphy, J.N.1    Saltikov, C.W.2
  • 15
    • 0025815528 scopus 로고
    • The ArsR protein is a trans-acting regulatory protein
    • Wu J, Rosen BP, (1991) The ArsR protein is a trans-acting regulatory protein. Mol Microbiol 5: 1331-1336.
    • (1991) Mol Microbiol , vol.5 , pp. 1331-1336
    • Wu, J.1    Rosen, B.P.2
  • 16
    • 0027225766 scopus 로고
    • The transcriptional activator HlyU of Vibrio cholerae: nucleotide sequence and role in virulence gene expression
    • Williams SG, Attridge SR, Manning PA, (1993) The transcriptional activator HlyU of Vibrio cholerae: nucleotide sequence and role in virulence gene expression. Mol Microbiol 9: 751-760.
    • (1993) Mol Microbiol , vol.9 , pp. 751-760
    • Williams, S.G.1    Attridge, S.R.2    Manning, P.A.3
  • 17
    • 34447260073 scopus 로고    scopus 로고
    • The HlyU protein is a positive regulator of rtxA1, a gene responsible for cytotoxicity and virulence in the human pathogen Vibrio vulnificus
    • doi:10.1128/IAI.00045-07
    • Liu M, Alice AF, Naka H, Crosa JH, (2007) The HlyU protein is a positive regulator of rtxA1, a gene responsible for cytotoxicity and virulence in the human pathogen Vibrio vulnificus. Infect Immun 75: 3282-3289 doi:10.1128/IAI.00045-07.
    • (2007) Infect Immun , vol.75 , pp. 3282-3289
    • Liu, M.1    Alice, A.F.2    Naka, H.3    Crosa, J.H.4
  • 18
    • 34248208219 scopus 로고    scopus 로고
    • Identification and characterization of the Vibrio vulnificus rtxA essential for cytotoxicity in vitro and virulence in mice
    • Lee JH, Kim MW, Kim BS, Kim SM, Lee BC, et al. (2007) Identification and characterization of the Vibrio vulnificus rtxA essential for cytotoxicity in vitro and virulence in mice. J Microbiol 45: 146-152.
    • (2007) J Microbiol , vol.45 , pp. 146-152
    • Lee, J.H.1    Kim, M.W.2    Kim, B.S.3    Kim, S.M.4    Lee, B.C.5
  • 19
    • 77749279742 scopus 로고    scopus 로고
    • Genome-wide characterization of the SloR metalloregulome in Streptococcus mutans
    • doi:10.1128/JB.01161-09
    • O'Rourke KP, Shaw JD, Pesesky MW, Cook BT, Roberts SM, et al. (2010) Genome-wide characterization of the SloR metalloregulome in Streptococcus mutans. J Bacteriol 192: 1433-1443 doi:10.1128/JB.01161-09.
    • (2010) J Bacteriol , vol.192 , pp. 1433-1443
    • O'Rourke, K.P.1    Shaw, J.D.2    Pesesky, M.W.3    Cook, B.T.4    Roberts, S.M.5
  • 20
    • 76449096333 scopus 로고    scopus 로고
    • Crystal structure of the transcriptional repressor PagR of Bacillus anthracis
    • doi:10.1099/mic.0.033548-0
    • Zhao H, Volkov A, Veldore VH, Hoch JA, Varughese KI, (2010) Crystal structure of the transcriptional repressor PagR of Bacillus anthracis. Microbiology (Reading, Engl.) 156: 385-391 doi:10.1099/mic.0.033548-0.
    • (2010) Microbiology (Reading, Engl.) , vol.156 , pp. 385-391
    • Zhao, H.1    Volkov, A.2    Veldore, V.H.3    Hoch, J.A.4    Varughese, K.I.5
  • 21
    • 36148960477 scopus 로고    scopus 로고
    • Mycobacterial cells have dual nickel-cobalt sensors: sequence relationships and metal sites of metal-responsive repressors are not congruent
    • doi:10.1074/jbc.M703451200
    • Campbell DR, Chapman KE, Waldron KJ, Tottey S, Kendall S, et al. (2007) Mycobacterial cells have dual nickel-cobalt sensors: sequence relationships and metal sites of metal-responsive repressors are not congruent. J Biol Chem 282: 32298-32310 doi:10.1074/jbc.M703451200.
    • (2007) J Biol Chem , vol.282 , pp. 32298-32310
    • Campbell, D.R.1    Chapman, K.E.2    Waldron, K.J.3    Tottey, S.4    Kendall, S.5
  • 22
    • 0037064122 scopus 로고    scopus 로고
    • A nickel-cobalt-sensing ArsR-SmtB family repressor. Contributions of cytosol and effector binding sites to metal selectivity
    • doi:10.1074/jbc.M207677200
    • Cavet JS, Meng W, Pennella MA, Appelhoff RJ, Giedroc DP, et al. (2002) A nickel-cobalt-sensing ArsR-SmtB family repressor. Contributions of cytosol and effector binding sites to metal selectivity. J Biol Chem 277: 38441-38448 doi:10.1074/jbc.M207677200.
    • (2002) J Biol Chem , vol.277 , pp. 38441-38448
    • Cavet, J.S.1    Meng, W.2    Pennella, M.A.3    Appelhoff, R.J.4    Giedroc, D.P.5
  • 23
    • 0242582330 scopus 로고    scopus 로고
    • A cadmium-lead-sensing ArsR-SmtB repressor with novel sensory sites. Complementary metal discrimination by NmtR AND CmtR in a common cytosol
    • doi:10.1074/jbc.M307877200
    • Cavet JS, Graham AI, Meng W, Robinson NJ, (2003) A cadmium-lead-sensing ArsR-SmtB repressor with novel sensory sites. Complementary metal discrimination by NmtR AND CmtR in a common cytosol. J Biol Chem 278: 44560-44566 doi:10.1074/jbc.M307877200.
    • (2003) J Biol Chem , vol.278 , pp. 44560-44566
    • Cavet, J.S.1    Graham, A.I.2    Meng, W.3    Robinson, N.J.4
  • 24
    • 23644435460 scopus 로고    scopus 로고
    • Rv2358 and FurB: two transcriptional regulators from Mycobacterium tuberculosis which respond to zinc
    • doi:10.1128/JB.187.16.5837-5840.2005
    • Canneva F, Branzoni M, Riccardi G, Provvedi R, Milano A, (2005) Rv2358 and FurB: two transcriptional regulators from Mycobacterium tuberculosis which respond to zinc. J Bacteriol 187: 5837-5840 doi:10.1128/JB.187.16.5837-5840.2005.
    • (2005) J Bacteriol , vol.187 , pp. 5837-5840
    • Canneva, F.1    Branzoni, M.2    Riccardi, G.3    Provvedi, R.4    Milano, A.5
  • 25
    • 67650082448 scopus 로고    scopus 로고
    • Dissecting transcription regulatory pathways through a new bacterial one-hybrid reporter system
    • doi:10.1101/gr.086595.108
    • Guo M, Feng H, Zhang J, Wang W, Wang Y, et al. (2009) Dissecting transcription regulatory pathways through a new bacterial one-hybrid reporter system. Genome Res 19: 1301-1308 doi:10.1101/gr.086595.108.
    • (2009) Genome Res , vol.19 , pp. 1301-1308
    • Guo, M.1    Feng, H.2    Zhang, J.3    Wang, W.4    Wang, Y.5
  • 26
    • 0030003134 scopus 로고    scopus 로고
    • Applications for green fluorescent protein (GFP) in the study of host-pathogen interactions
    • Valdivia RH, Hromockyj AE, Monack D, Ramakrishnan L, Falkow S, (1996) Applications for green fluorescent protein (GFP) in the study of host-pathogen interactions. Gene 173: 47-52.
    • (1996) Gene , vol.173 , pp. 47-52
    • Valdivia, R.H.1    Hromockyj, A.E.2    Monack, D.3    Ramakrishnan, L.4    Falkow, S.5
  • 27
    • 78651285748 scopus 로고    scopus 로고
    • CDD: a Conserved Domain Database for the functional annotation of proteins
    • doi:10.1093/nar/gkq1189
    • Marchler-Bauer A, Lu S, Anderson JB, Chitsaz F, Derbyshire MK, et al. (2011) CDD: a Conserved Domain Database for the functional annotation of proteins. Nucleic Acids Res 39: D225-229 doi:10.1093/nar/gkq1189.
    • (2011) Nucleic Acids Res , vol.39
    • Marchler-Bauer, A.1    Lu, S.2    Anderson, J.B.3    Chitsaz, F.4    Derbyshire, M.K.5
  • 28
    • 63749128999 scopus 로고    scopus 로고
    • Damage control: regulating defenses against toxic metals and metalloids
    • doi:10.1016/j.mib.2009.02.003
    • Summers AO, (2009) Damage control: regulating defenses against toxic metals and metalloids. Curr Opin Microbiol 12: 138-144 doi:10.1016/j.mib.2009.02.003.
    • (2009) Curr Opin Microbiol , vol.12 , pp. 138-144
    • Summers, A.O.1
  • 29
    • 43049170080 scopus 로고    scopus 로고
    • Mycobacterium tuberculosis senses host-derived carbon monoxide during macrophage infection
    • doi:10.1016/j.chom.2008.03.007
    • Shiloh MU, Manzanillo P, Cox JS, (2008) Mycobacterium tuberculosis senses host-derived carbon monoxide during macrophage infection. Cell Host Microbe 3: 323-330 doi:10.1016/j.chom.2008.03.007.
    • (2008) Cell Host Microbe , vol.3 , pp. 323-330
    • Shiloh, M.U.1    Manzanillo, P.2    Cox, J.S.3
  • 30
    • 70849126660 scopus 로고    scopus 로고
    • Solution structure of a paradigm ArsR family zinc sensor in the DNA-bound state
    • doi:10.1073/pnas.0905558106
    • Arunkumar AI, Campanello GC, Giedroc DP, (2009) Solution structure of a paradigm ArsR family zinc sensor in the DNA-bound state. Proc Natl Acad Sci U S A 106: 18177-18182 doi:10.1073/pnas.0905558106.
    • (2009) Proc Natl Acad Sci U S A , vol.106 , pp. 18177-18182
    • Arunkumar, A.I.1    Campanello, G.C.2    Giedroc, D.P.3
  • 31
    • 33644964124 scopus 로고    scopus 로고
    • Members of the IclR family of bacterial transcriptional regulators function as activators and/or repressors
    • doi:10.1111/j.1574-6976.2005.00008.x
    • Molina-Henares AJ, Krell T, Eugenia Guazzaroni M, Segura A, Ramos JL, (2006) Members of the IclR family of bacterial transcriptional regulators function as activators and/or repressors. FEMS Microbiol Rev 30: 157-186 doi:10.1111/j.1574-6976.2005.00008.x.
    • (2006) FEMS Microbiol Rev , vol.30 , pp. 157-186
    • Molina-Henares, A.J.1    Krell, T.2    Eugenia Guazzaroni, M.3    Segura, A.4    Ramos, J.L.5
  • 34
    • 58149182735 scopus 로고    scopus 로고
    • TB database: an integrated platform for tuberculosis research
    • doi:10.1093/nar/gkn652
    • Reddy TBK, Riley R, Wymore F, Montgomery P, DeCaprio D, et al. (2009) TB database: an integrated platform for tuberculosis research. Nucleic Acids Res 37: D499-508 doi:10.1093/nar/gkn652.
    • (2009) Nucleic Acids Res , vol.37
    • Reddy, T.B.K.1    Riley, R.2    Wymore, F.3    Montgomery, P.4    DeCaprio, D.5
  • 35
    • 55749090094 scopus 로고    scopus 로고
    • The Mycobacterium tuberculosis phoPR operon is positively autoregulated in the virulent strain H37Rv
    • doi:10.1128/JB.00712-08
    • Gonzalo-Asensio J, Soto CY, Arbués A, Sancho J, del Carmen Menéndez M, et al. (2008) The Mycobacterium tuberculosis phoPR operon is positively autoregulated in the virulent strain H37Rv. J Bacteriol 190: 7068-7078 doi:10.1128/JB.00712-08.
    • (2008) J Bacteriol , vol.190 , pp. 7068-7078
    • Gonzalo-Asensio, J.1    Soto, C.Y.2    Arbués, A.3    Sancho, J.4    del Carmen, M.M.5
  • 36
    • 38949085941 scopus 로고    scopus 로고
    • A point mutation in the two-component regulator PhoP-PhoR accounts for the absence of polyketide-derived acyltrehaloses but not that of phthiocerol dimycocerosates in Mycobacterium tuberculosis H37Ra
    • doi:10.1128/JB.01465-07
    • Chesne-Seck M-L, Barilone N, Boudou F, Gonzalo Asensio J, Kolattukudy PE, et al. (2008) A point mutation in the two-component regulator PhoP-PhoR accounts for the absence of polyketide-derived acyltrehaloses but not that of phthiocerol dimycocerosates in Mycobacterium tuberculosis H37Ra. J Bacteriol 190: 1329-1334 doi:10.1128/JB.01465-07.
    • (2008) J Bacteriol , vol.190 , pp. 1329-1334
    • Chesne-Seck, M.-L.1    Barilone, N.2    Boudou, F.3    Gonzalo Asensio, J.4    Kolattukudy, P.E.5
  • 37
    • 84856894233 scopus 로고    scopus 로고
    • A TetR-like regulator broadly affects the expressions of diverse genes in Mycobacterium smegmatis
    • doi:10.1093/nar/gkr830
    • Yang M, Gao C, Cui T, An J, He Z-G, (2012) A TetR-like regulator broadly affects the expressions of diverse genes in Mycobacterium smegmatis. Nucleic Acids Res 40: 1009-1020 doi:10.1093/nar/gkr830.
    • (2012) Nucleic Acids Res , vol.40 , pp. 1009-1020
    • Yang, M.1    Gao, C.2    Cui, T.3    An, J.4    He, Z.-G.5
  • 39
    • 0003785155 scopus 로고
    • Experiments in Molecular Genetics
    • Cold Spring Harbor Laboratory Pr
    • Miller JH, (1972) Experiments in Molecular Genetics. pp. 352-355 Cold Spring Harbor Laboratory Pr.
    • (1972) , pp. 352-355
    • Miller, J.H.1
  • 40
    • 0028079877 scopus 로고
    • Escherichia coli-mycobacteria shuttle vectors for operon and gene fusions to lacZ: the pJEM series
    • Timm J, Lim EM, Gicquel B, (1994) Escherichia coli-mycobacteria shuttle vectors for operon and gene fusions to lacZ: the pJEM series. J Bacteriol 176: 6749-6753.
    • (1994) J Bacteriol , vol.176 , pp. 6749-6753
    • Timm, J.1    Lim, E.M.2    Gicquel, B.3
  • 41
    • 62649096815 scopus 로고    scopus 로고
    • Three Mycobacterium tuberculosis Rel toxin-antitoxin modules inhibit mycobacterial growth and are expressed in infected human macrophages
    • doi:10.1128/JB.01318-08
    • Korch SB, Contreras H, Clark-Curtiss JE, (2009) Three Mycobacterium tuberculosis Rel toxin-antitoxin modules inhibit mycobacterial growth and are expressed in infected human macrophages. J Bacteriol 191: 1618-1630 doi:10.1128/JB.01318-08.
    • (2009) J Bacteriol , vol.191 , pp. 1618-1630
    • Korch, S.B.1    Contreras, H.2    Clark-Curtiss, J.E.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.