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Volumn 40, Issue 3, 2012, Pages 1009-1020

A TetR-like regulator broadly affects the expressions of diverse genes in Mycobacterium smegmatis

Author keywords

[No Author keywords available]

Indexed keywords

DEOXYRIBONUCLEASE I; TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR TETR; UNCLASSIFIED DRUG;

EID: 84856894233     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkr830     Document Type: Article
Times cited : (53)

References (38)
  • 2
    • 67650082448 scopus 로고    scopus 로고
    • Dissecting transcription regulatory pathways through a new bacterial one-hybrid reporter system
    • Guo, M., Feng, H., Zhang, J., Wang, W., Wang, Y., Li, Y., Gao, C., Chen, H., Feng, Y. and He, Z. G. (2009) Dissecting transcription regulatory pathways through a new bacterial one-hybrid reporter system. Genome Res., 19, 1301-1308.
    • (2009) Genome Res , vol.19 , pp. 1301-1308
    • Guo, M.1    Feng, H.2    Zhang, J.3    Wang, W.4    Wang, Y.5    Li, Y.6    Gao, C.7    Chen, H.8    Feng, Y.9    He, Z.G.10
  • 3
    • 79955103273 scopus 로고    scopus 로고
    • World Health Organization (WHO) World Health Organization, Geneva
    • World Health Organization (WHO). (2010) Global tuberculosis control WHO report 2010. World Health Organization, Geneva, pp. 5-7.
    • (2010) Global Tuberculosis Control WHO Report 2010 , pp. 5-7
  • 4
    • 0031692027 scopus 로고    scopus 로고
    • DNA repair in Mycobacterium tuberculosis. What have we learnt from the genome sequence?
    • Mizrahi, V. and Andersen, S. J. (1998) DNA repair in Mycobacterium tuberculosis. What have we learnt from the genome sequence? Mol. Microbiol., 29, 1331-1339.
    • (1998) Mol. Microbiol , vol.29 , pp. 1331-1339
    • Mizrahi, V.1    Andersen, S.J.2
  • 5
    • 0025081151 scopus 로고
    • Isolation and characterization of efficient plasmid transformation mutants of Mycobacterium smegmatis
    • Snapper, S. B., Melton, R. E., Mustafa, S., Kieser, T. and Jacobs, W. R. (1990) Isolation and characterization of efficient plasmid transformation mutants of Mycobacterium smegmatis. Mol. Microbiol., 4, 1911-1919.
    • (1990) Mol. Microbiol , vol.4 , pp. 1911-1919
    • Snapper, S.B.1    Melton, R.E.2    Mustafa, S.3    Kieser, T.4    Jacobs, W.R.5
  • 6
    • 0032786233 scopus 로고    scopus 로고
    • A phylogenomic study of DNA repair genes, proteins, and processes
    • Eisen, J. A. and Hanawalt, P. C. (1999) A phylogenomic study of DNA repair genes, proteins, and processes. Mutat. Res., 435, 171-213.
    • (1999) Mutat. Res , vol.435 , pp. 171-213
    • Eisen, J.A.1    Hanawalt, P.C.2
  • 8
    • 0027513388 scopus 로고
    • Characterization of dinY, a new Escherichia coli DNA repair gene whose products are damage inducible even in a lexA(Def) background
    • Petit, C., Cayrol, C., Lesca, C., Kaiser, P., Thompson, C. and Defais, M. (1993) Characterization of dinY, a new Escherichia coli DNA repair gene whose products are damage inducible even in a lexA(Def) background. J. Bacteriol., 175, 642-646.
    • (1993) J. Bacteriol , vol.175 , pp. 642-646
    • Petit, C.1    Cayrol, C.2    Lesca, C.3    Kaiser, P.4    Thompson, C.5    Defais, M.6
  • 9
    • 0028786044 scopus 로고
    • Expression of the dnaB gene of Escherichia coli is inducible by replication-blocking DNA damage in a recA-independent manner
    • Kleinsteuber, S. and Quiñ ones, A. (1995) Expression of the dnaB gene of Escherichia coli is inducible by replication-blocking DNA damage in a recA-independent manner. Mol. Gen. Genet., 248, 695-702.
    • (1995) Mol. Gen. Genet , vol.248 , pp. 695-702
    • Kleinsteuber, S.1    Quiñones, A.2
  • 10
    • 0242690139 scopus 로고    scopus 로고
    • The majority of inducible DNA repair genes in Mycobacterium tuberculosis are induced independently of RecA
    • Rand, L., Hinds, J., Springer, B., Sander, P., Buxton, R. S. and Davis, E. O. (2003) The majority of inducible DNA repair genes in Mycobacterium tuberculosis are induced independently of RecA. Mol. Microbiol., 50, 1031-1042.
    • (2003) Mol. Microbiol , vol.50 , pp. 1031-1042
    • Rand, L.1    Hinds, J.2    Springer, B.3    Sander, P.4    Buxton, R.S.5    Davis, E.O.6
  • 11
    • 0034087676 scopus 로고    scopus 로고
    • Structural basis of gene regulation by the tetracycline inducible Tet repressor-operator system
    • Orth, P., Schnappinger, D., Hillen, W., Saenger, W. and Hinrichs, W. (2000) Structural basis of gene regulation by the tetracycline inducible Tet repressor-operator system. Nat. Struct. Biol, 7, 215-219.
    • (2000) Nat. Struct. Biol , vol.7 , pp. 215-219
    • Orth, P.1    Schnappinger, D.2    Hillen, W.3    Saenger, W.4    Hinrichs, W.5
  • 15
    • 3242812945 scopus 로고    scopus 로고
    • Crystal structure of the TetR/CamR family repressor Mycobacterium tuberculosis EthR implicated in ethionamide resistance
    • Dover, L. G., Corsino, P. E., Daniels, I. R., Cocklin, S. L., Tatituri, V., Besra, G. S. and Fütterer, K. (2004) Crystal structure of the TetR/CamR family repressor Mycobacterium tuberculosis EthR implicated in ethionamide resistance. J. Mol. Biol., 340, 1095-1105.
    • (2004) J. Mol. Biol , vol.340 , pp. 1095-1105
    • Dover, L.G.1    Corsino, P.E.2    Daniels, I.R.3    Cocklin, S.L.4    Tatituri, V.5    Besra, G.S.6    Fütterer, K.7
  • 16
    • 34447567336 scopus 로고    scopus 로고
    • A highly conserved transcriptional repressor controls a large regulon involved in lipid degradation in Mycobacterium smegmatis and Mycobacterium tuberculosis
    • Kendall, S. L., Withers, M., Soffair, C. N., Moreland, N. J., Gurcha, S., Sidders, B., Frita, R., Ten Bokum, A., Besra, G. S., Lott, J. S. et al. (2007) A highly conserved transcriptional repressor controls a large regulon involved in lipid degradation in Mycobacterium smegmatis and Mycobacterium tuberculosis. Mol. Microbiol., 65, 684-699.
    • (2007) Mol. Microbiol , vol.65 , pp. 684-699
    • Kendall, S.L.1    Withers, M.2    Soffair, C.N.3    Moreland, N.J.4    Gurcha, S.5    Sidders, B.6    Frita, R.7    Ten Bokum, A.8    Besra, G.S.9    Lott, J.S.10
  • 17
    • 34547680397 scopus 로고    scopus 로고
    • The novel transcriptional regulator SczA mediates protection against Zn2+stress by activation of the Zn2+-resistance gene czcD in Streptococcus pneumoniae
    • Kloosterman, T. G., van der Kooi-Pol, M. M., Bijlsma, J. J. E. and Kuipers, O. P. (2007) The novel transcriptional regulator SczA mediates protection against Zn2+stress by activation of the Zn2+-resistance gene czcD in Streptococcus pneumoniae. Mol. Microbiol., 65, 1049-1063.
    • (2007) Mol. Microbiol , vol.65 , pp. 1049-1063
    • Kloosterman, T.G.1    Van Der Kooi-Pol, M.M.2    Bijlsma, J.J.E.3    Kuipers, O.P.4
  • 18
    • 0041529868 scopus 로고    scopus 로고
    • The carboxyl-terminal domain of bacteriophage T7 single-stranded DNA-binding protein modulates DNA binding and interaction with T7 DNA polymerase
    • He, Z. G., Rezende, L. F., Willcox, S., Griffith, J. D. and Richardson, C. C. (2003) The carboxyl-terminal domain of bacteriophage T7 single-stranded DNA-binding protein modulates DNA binding and interaction with T7 DNA polymerase. J. Biol. Chem., 278, 29538-29545.
    • (2003) J. Biol. Chem , vol.278 , pp. 29538-29545
    • He, Z.G.1    Rezende, L.F.2    Willcox, S.3    Griffith, J.D.4    Richardson, C.C.5
  • 19
    • 77956586435 scopus 로고    scopus 로고
    • The characterization of conserved binding motifs and potential target genes for M. tuberculosis MtrAB reveals a link between the two-component system and the drug resistance of M. smegmatis
    • Li, Y., Zeng, J., Zhang, H. and He, Z. G. (2010) The characterization of conserved binding motifs and potential target genes for M. tuberculosis MtrAB reveals a link between the two-component system and the drug resistance of M. smegmatis. BMC Microbiol., 10, 242.
    • (2010) BMC Microbiol , vol.10 , pp. 242
    • Li, Y.1    Zeng, J.2    Zhang, H.3    He, Z.G.4
  • 20
    • 0025081151 scopus 로고
    • Isolation and characterization of efficient plasmid transformation mutants of Mycobacterium smegmatis
    • Snapper, S. B., Melton, R. E., Mustafa, S., Kieser, T. and Jacobs, W. R. (1990) Isolation and characterization of efficient plasmid transformation mutants of Mycobacterium smegmatis. Mol. Microbiol., 4, 1911-1919.
    • (1990) Mol. Microbiol , vol.4 , pp. 1911-1919
    • Snapper, S.B.1    Melton, R.E.2    Mustafa, S.3    Kieser, T.4    Jacobs, W.R.5
  • 21
    • 0036081140 scopus 로고    scopus 로고
    • IdeR, an essential gene in mycobacterium tuberculosis: Role of IdeR in iron-dependent gene expression, iron metabolism, and oxidative stress response
    • Rodriguez, G. M., Voskuil, M. I., Gold, B., Schoolnik, G. K. and Smith, I. (2002) ideR, an essential gene in mycobacterium tuberculosis: role of IdeR in iron-dependent gene expression, iron metabolism, and oxidative stress response. Infect. Immun., 70, 3371-3381.
    • (2002) Infect. Immun , vol.70 , pp. 3371-3381
    • Rodriguez, G.M.1    Voskuil, M.I.2    Gold, B.3    Schoolnik, G.K.4    Smith, I.5
  • 23
    • 77956276376 scopus 로고    scopus 로고
    • Characterization of the interaction and cross-regulation of three Mycobacterium tuberculosis RelBE modules
    • Yang, M., Gao, C., Wang, Y., Zhang, H. and He, Z. G. (2010) Characterization of the interaction and cross-regulation of three Mycobacterium tuberculosis RelBE modules. PLoS ONE, 5, e10672.
    • (2010) PLoS ONE , vol.5
    • Yang, M.1    Gao, C.2    Wang, Y.3    Zhang, H.4    He, Z.G.5
  • 24
    • 6344272244 scopus 로고    scopus 로고
    • Deletion of the genes encoding the MtrA-MtrB two-component system of Corynebacterium glutamicum has a strong influence on cell morphology, antibiotics susceptibility and expression of genes involved in osmoprotection
    • Möker, N., Brocker, M., Schaffer, S., Krämer, R., Morbach, S. and Bott, M. (2004) Deletion of the genes encoding the MtrA-MtrB two-component system of Corynebacterium glutamicum has a strong influence on cell morphology, antibiotics susceptibility and expression of genes involved in osmoprotection. Mol. Microbiol., 54, 420-438.
    • (2004) Mol. Microbiol , vol.54 , pp. 420-438
    • Möker, N.1    Brocker, M.2    Schaffer, S.3    Krämer, R.4    Morbach, S.5    Bott, M.6
  • 25
    • 0035710746 scopus 로고    scopus 로고
    • Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method
    • Livak, K. J. and Schmittgen, T. D. (2001) Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. Methods, 25, 402-408.
    • (2001) Methods , vol.25 , pp. 402-408
    • Livak, K.J.1    Schmittgen, T.D.2
  • 26
    • 0035881472 scopus 로고    scopus 로고
    • Binding of c-Myc to chromatin mediates mitogen-induced acetylation of histone H4 and gene activation
    • Frank, S. R., Schroeder, M., Fernandez, P., Taubert, S. and Amati, B. (2001) Binding of c-Myc to chromatin mediates mitogen-induced acetylation of histone H4 and gene activation. Genes Dev., 15, 2069-2082.
    • (2001) Genes Dev , vol.15 , pp. 2069-2082
    • Frank, S.R.1    Schroeder, M.2    Fernandez, P.3    Taubert, S.4    Amati, B.5
  • 28
    • 0003785155 scopus 로고
    • Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
    • Miller, J. H. (1972) Experiments in Molecular Genetics. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, pp. 352-355.
    • (1972) Experiments in Molecular Genetics , pp. 352-355
    • Miller, J.H.1
  • 29
    • 0037453719 scopus 로고    scopus 로고
    • DnaE2 polymerase contributes to in vivo survival and the emergence of drug resistance in Mycobacterium tuberculosis
    • Boshoff, H. I. M., Reed, M. B., Barry, C. E. III and Mizrahi, V. (2003) DnaE2 polymerase contributes to in vivo survival and the emergence of drug resistance in Mycobacterium tuberculosis. Cell, 113, 183-193.
    • (2003) Cell , vol.113 , pp. 183-193
    • Boshoff, H.I.M.1    Reed, M.B.2    Barry Iii, C.E.3    Mizrahi, V.4
  • 30
    • 0034006621 scopus 로고    scopus 로고
    • Determining mutation rates in bacterial populations
    • Rosche, W. A. and Foster, P. L. (2000) Determining mutation rates in bacterial populations. Methods, 20, 4-17.
    • (2000) Methods , vol.20 , pp. 4-17
    • Rosche, W.A.1    Foster, P.L.2
  • 31
    • 33947408132 scopus 로고    scopus 로고
    • In vitro analysis of rates and spectra of mutations in a polymorphic region of the Rv0746 PE-PGRS gene of Mycobacterium tuberculosis
    • Machowski, E. E., Barichievy, S., Springer, B., Durbach, S. I. and Mizrahi, V. (2007) In vitro analysis of rates and spectra of mutations in a polymorphic region of the Rv0746 PE-PGRS gene of Mycobacterium tuberculosis. J. Bacteriol., 189, 2190-2195.
    • (2007) J. Bacteriol , vol.189 , pp. 2190-2195
    • MacHowski, E.E.1    Barichievy, S.2    Springer, B.3    Durbach, S.I.4    Mizrahi, V.5
  • 32
    • 0001313535 scopus 로고
    • The distribution of the numbers of mutants in bacterial populations
    • Lea, D. E. and Coulson, C. A. (1949) The distribution of the numbers of mutants in bacterial populations. J. Genet., 49, 264-285.
    • (1949) J. Genet , vol.49 , pp. 264-285
    • Lea, D.E.1    Coulson, C.A.2
  • 33
    • 66349117823 scopus 로고    scopus 로고
    • Fluctuation analysis CalculatOR: A web tool for the determination of mutation rate using Luria-Delbruck fluctuation analysis
    • Hall, B. M., Ma, C. X., Liang, P. and Singh, K. K. (2009) Fluctuation analysis CalculatOR: a web tool for the determination of mutation rate using Luria-Delbruck fluctuation analysis. Bioinformatics, 25, 1564-1565.
    • (2009) Bioinformatics , vol.25 , pp. 1564-1565
    • Hall, B.M.1    Ma, C.X.2    Liang, P.3    Singh, K.K.4
  • 37
    • 33748659450 scopus 로고    scopus 로고
    • The mycobacterium-specific gene Rv2719c is DNA damage inducible independently of RecA
    • Brooks, P. C., Dawson, L. F., Rand, L. and Davis, E. O. (2006) The mycobacterium-specific gene Rv2719c is DNA damage inducible independently of RecA. J. Bacteriol., 188, 6034-6038.
    • (2006) J. Bacteriol , vol.188 , pp. 6034-6038
    • Brooks, P.C.1    Dawson, L.F.2    Rand, L.3    Davis, E.O.4
  • 38
    • 80052399867 scopus 로고    scopus 로고
    • A ClpR-like regulator specifically recognizes a RecA-independent promoter motif and broadly regulates expression of DNA damage inducible genes in mycobacteria
    • Wang, Y., Huang, Y., Xue, C., He, Y. and He, Z. G. (2011) A ClpR-like regulator specifically recognizes a RecA-independent promoter motif and broadly regulates expression of DNA damage inducible genes in mycobacteria. J. Biol. Chem., 286, 31159-31167.
    • (2011) J. Biol. Chem , vol.286 , pp. 31159-31167
    • Wang, Y.1    Huang, Y.2    Xue, C.3    He, Y.4    He, Z.G.5


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