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Volumn 17, Issue 9, 2011, Pages 1655-1663

Structural basis for the dual U4 and U4atac snRNA-binding specificity of spliceosomal protein hPrp31

Author keywords

Major and minor spliceosome; pre mRNA splicing; RNA protein complex; U4 snRNP and U4atac snRNP; X ray crystallography

Indexed keywords

PROTEIN; RNA; SMALL NUCLEAR RNA; SPLICEOSOMAL PROTEIN HPRP31; U4 PROTEIN; U4ATAC PROTEIN; UNCLASSIFIED DRUG;

EID: 84860406655     PISSN: 13558382     EISSN: 14699001     Source Type: Journal    
DOI: 10.1261/rna.2690611     Document Type: Article
Times cited : (14)

References (22)
  • 1
    • 0025071240 scopus 로고
    • Solution structure of an unusually stable RNA hairpin, 5′GGAC(UUCG)GUCC
    • Cheong C., Varani G., Tinoco I. Jr. 1990. Solution structure of an unusually stable RNA hairpin, 5′GGAC(UUCG)GUCC. Nature 346: 680-682.
    • (1990) Nature , vol.346 , pp. 680-682
    • Cheong, C.1    Varani, G.2    Tinoco Jr., I.3
  • 2
    • 12844270442 scopus 로고    scopus 로고
    • The snRNP 15.5K protein folds its cognate K-turn RNA: A combined theoretical and biochemical study
    • DOI 10.1261/rna.7149605
    • Cojocaru V., Nottrott S., Klement R., Jovin T.M. 2005. The snRNP 15.5K protein folds its cognate K-turn RNA: A combined theoretical and biochemical study. RNA 11: 197-209. (Pubitemid 40165634)
    • (2005) RNA , vol.11 , Issue.2 , pp. 197-209
    • Cojocaru, V.1    Nottrott, S.2    Klement, R.3    Jovin, T.M.4
  • 4
    • 78049446556 scopus 로고    scopus 로고
    • Structure of the K-turn U4 RNA: A combined NMR and SANS study
    • Falb M., Amata I., Gabel F., Simon B., Carlomagno T. 2010. Structure of the K-turn U4 RNA: A combined NMR and SANS study. Nucleic Acids Res 38: 6274-6285.
    • (2010) Nucleic Acids Res , vol.38 , pp. 6274-6285
    • Falb, M.1    Amata, I.2    Gabel, F.3    Simon, B.4    Carlomagno, T.5
  • 5
    • 0026423027 scopus 로고
    • Structural features that give rise to the unusual stability of RNA hairpins containing GNRA loops
    • Heus H.A., Pardi A. 1991. Structural features that give rise to the unusual stability of RNA hairpins containing GNRA tetraloops. Science 253: 191-194. (Pubitemid 21917139)
    • (1991) Science , vol.253 , Issue.5016 , pp. 191-194
    • Heus, H.A.1    Pardi, A.2
  • 6
    • 23944455046 scopus 로고    scopus 로고
    • LSm proteins form heptameric rings that bind to RNA via repeating motifs
    • DOI 10.1016/j.tibs.2005.07.006, PII S0968000405002136
    • Khusial P., Plaag R., Zieve G.W. 2005. LSm proteins form heptameric rings that bind to RNA via repeating motifs. Trends Biochem Sci 30: 522-528. (Pubitemid 41206508)
    • (2005) Trends in Biochemical Sciences , vol.30 , Issue.9 , pp. 522-528
    • Khusial, P.1    Plaag, R.2    Zieve, G.W.3
  • 7
    • 0035423087 scopus 로고    scopus 로고
    • The kink-turn: A new RNA secondary structure motif
    • DOI 10.1093/emboj/20.15.4214
    • Klein D.J., Schmeing T.M., Moore P.B., Steitz T.A. 2001. The kink-turn: A new RNA secondary structure motif. EMBO J 20: 4214-4221. (Pubitemid 32751837)
    • (2001) EMBO Journal , vol.20 , Issue.15 , pp. 4214-4221
    • Klein, D.J.1    Schmeing, T.M.2    Moore, P.B.3    Steitz, T.A.4
  • 8
    • 0028225137 scopus 로고
    • A novel RNA-binding motif in omnipotent suppressors of translation termination, ribosomal proteins and a ribosome modification enzyme?
    • Koonin E.V., Bork P., Sander C. 1994. A novel RNA-binding motif in omnipotent suppressors of translation termination, ribosomal proteins and a ribosome modification enzyme? Nucleic Acids Res 22: 2166-2167. (Pubitemid 24192921)
    • (1994) Nucleic Acids Research , vol.22 , Issue.11 , pp. 2166-2167
    • Koonin, E.V.1    Bork, P.2    Sander, C.3
  • 9
    • 28344439968 scopus 로고    scopus 로고
    • Complete MALDI-ToF MS analysis of cross-linked peptide-RNA oligonucleotides derived from nonlabeled UV-irradiated ribonucleoprotein particles
    • DOI 10.1261/rna.2176605
    • Kühn-Hölsken E., Lenz C., Sander B., Lührmann R., Urlaub H. 2005. Complete MALDI-ToF MS analysis of cross-linked peptide-RNA oligonucleotides derived from nonlabeled UV-irradiated ribonucleoprotein particles. RNA 11: 1915-1930. (Pubitemid 41720040)
    • (2005) RNA , vol.11 , Issue.12 , pp. 1915-1930
    • Kuhn-Holsken, E.1    Lenz, C.2    Sander, B.3    Luhrmann, R.4    Urlaub, H.5
  • 10
    • 34147095881 scopus 로고    scopus 로고
    • Binding of the human Prp31 Nop domain to a composite RNA-protein platform in U4 snRNP
    • DOI 10.1126/science.1137924
    • Liu S., Li P., Dybkov O., Nottrott S., Hartmuth K., Lührmann R., Carlomagno T., Wahl M.C. 2007. Binding of the human Prp31 Nop domain to a composite RNA-protein platform in U4 snRNP. Science 316: 115-120. (Pubitemid 46559531)
    • (2007) Science , vol.316 , Issue.5821 , pp. 115-120
    • Liu, S.1    Li, P.2    Dybkov, O.3    Nottrott, S.4    Hartmuth, K.5    Luhrmann, R.6    Carlomagno, T.7    Wahl, M.C.8
  • 11
    • 33745933955 scopus 로고    scopus 로고
    • HKL-3000: The integration of data reduction and structure solution - From diffraction images to an initial model in minutes
    • DOI 10.1107/S0907444906019949
    • Minor W., Cymborowski M., Otwinowski Z., Chruszcz M. 2006. HKL-3000: The integration of data reduction and structure solution - from diffraction images to an initial model in minutes. Acta Crystallogr D Biol Crystallogr 62: 859-866. (Pubitemid 44125661)
    • (2006) Acta Crystallographica Section D: Biological Crystallography , vol.62 , Issue.8 , pp. 859-866
    • Minor, W.1    Cymborowski, M.2    Otwinowski, Z.3    Chruszcz, M.4
  • 12
    • 0033229873 scopus 로고    scopus 로고
    • Functional interaction of a novel 15.5kD [U4/U6middot;U5] tri-snRNP protein with the 5' stem-loop of U4 snRNA
    • DOI 10.1093/emboj/18.21.6119
    • Nottrott S., Hartmuth K., Fabrizio P., Urlaub H., Vidovic I., Ficner R., Lührmann R. 1999. Functional interaction of a novel 15.5kD [U4/U6·U5] tri-snRNP protein with the 5′ stem-loop of U4 snRNA. EMBO J 18: 6119-6133. (Pubitemid 29515687)
    • (1999) EMBO Journal , vol.18 , Issue.21 , pp. 6119-6133
    • Nottrott, S.1    Hartmuth, K.2    Fabrizio, P.3    Urlaub, H.4    Vidovic, I.5    Ficner, R.6    Luhrmann, R.7
  • 13
    • 0037107418 scopus 로고    scopus 로고
    • Hierarchical, clustered protein interactions with U4/U6 snRNA: A biochemical role for U4/U6 proteins
    • DOI 10.1093/emboj/cdf544
    • Nottrott S., Urlaub H., Lührmann R. 2002. Hierarchical, clustered protein interactions with U4/U6 snRNA: A biochemical role for U4/U6 proteins. EMBO J 21: 5527-5538. (Pubitemid 35231032)
    • (2002) EMBO Journal , vol.21 , Issue.20 , pp. 5527-5538
    • Nottrott, S.1    Urlaub, H.2    Luhrmann, R.3
  • 14
    • 0345169036 scopus 로고    scopus 로고
    • Splicing double: Insights from the second spliceosome
    • DOI 10.1038/nrm1259
    • Patel A.A., Steitz J.A. 2003. Splicing double: Insights from the second spliceosome. Nat Rev Mol Cell Biol 4: 960-970. (Pubitemid 37493644)
    • (2003) Nature Reviews Molecular Cell Biology , vol.4 , Issue.12 , pp. 960-970
    • Patel, A.A.1    Steitz, J.A.2
  • 15
    • 33748778456 scopus 로고    scopus 로고
    • RNA structural requirements for the association of the spliceosomal hPrp31 protein with the U4 and U4atac small nuclear ribonucleoproteins
    • DOI 10.1074/jbc.M603350200
    • Schultz A., Nottrott S., Hartmuth K., Lührmann R. 2006. RNA structural requirements for the association of the spliceosomal hPrp31 protein with the U4 and U4atac snRNP. J Biol Chem 281: 28278-28286. (Pubitemid 44414541)
    • (2006) Journal of Biological Chemistry , vol.281 , Issue.38 , pp. 28278-28286
    • Schultz, A.1    Nottrott, S.2    Hartmuth, K.3    Luhrmann, R.4
  • 16
    • 33745598322 scopus 로고    scopus 로고
    • The ever-growing world of small nuclear ribonucleoproteins
    • ed. RF Gesteland et al. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
    • Tycowski K.T., Kolev N.G., Conrad N.K., Fok V., Steitz J.A. 2006. The ever-growing world of small nuclear ribonucleoproteins. In The RNA world (ed. RF Gesteland et al.), pp. 327-368. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
    • (2006) The RNA World , pp. 327-368
    • Tycowski, K.T.1    Kolev, N.G.2    Conrad, N.K.3    Fok, V.4    Steitz, J.A.5
  • 18
    • 0034509631 scopus 로고    scopus 로고
    • Crystal structure of the spliceosomal 15.5kD protein bound to a U4 snRNA fragment
    • DOI 10.1016/S1097-2765(00)00131-3
    • Vidovic I., Nottrott S., Hartmuth K., Lührmann R., Ficner R. 2000. Crystal structure of the spliceosomal 15.5kD protein bound to a U4 snRNA fragment. Mol Cell 6: 1331-1342. (Pubitemid 32045926)
    • (2000) Molecular Cell , vol.6 , Issue.6 , pp. 1331-1342
    • Vidovic, I.1    Nottrott, S.2    Hartmuth, K.3    Luhrmann, R.4    Ficner, R.5
  • 19
    • 60349104299 scopus 로고    scopus 로고
    • The spliceosome: Design principles of a dynamic RNP machine
    • Wahl M.C., Will C.L., Lührmann R. 2009. The spliceosome: Design principles of a dynamic RNP machine. Cell 136: 701-718.
    • (2009) Cell , vol.136 , pp. 701-718
    • Wahl, M.C.1    Will, C.L.2    Lührmann, R.3
  • 20
    • 0035370526 scopus 로고    scopus 로고
    • Spliceosomal UsnRNP biogenesis, structure and function
    • DOI 10.1016/S0955-0674(00)00211-8
    • Will C.L., Lührmann R. 2001. Spliceosomal UsnRNP biogenesis, structure and function. Curr Opin Cell Biol 13: 290-301. (Pubitemid 32429493)
    • (2001) Current Opinion in Cell Biology , vol.13 , Issue.3 , pp. 290-301
    • Will, C.L.1    Luhrmann, R.2
  • 21
    • 26844431946 scopus 로고    scopus 로고
    • Splicing of a rare class of introns by the U12-dependent spliceosome
    • DOI 10.1515/BC.2005.084
    • Will C.L., Lührmann R. 2005. Splicing of a rare class of introns by the U12-dependent spliceosome. Biol Chem 386: 713-724. (Pubitemid 41448152)
    • (2005) Biological Chemistry , vol.386 , Issue.8 , pp. 713-724
    • Will, C.L.1    Luhrmann, R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.