-
1
-
-
0032557042
-
Pleistocene phylogeographic effects on avian populations and the speciation process
-
Avise J.C., Walker D. Pleistocene phylogeographic effects on avian populations and the speciation process. Proc. R. Soc. Lond. B 1998, 265:457-463.
-
(1998)
Proc. R. Soc. Lond. B
, vol.265
, pp. 457-463
-
-
Avise, J.C.1
Walker, D.2
-
2
-
-
52149099649
-
Multilocus phylogenetic analysis of a rapid radiation in the genus Thomomys (Rodentia: Geomyidae)
-
Belfiore N.M., Liu L., Moritz C. Multilocus phylogenetic analysis of a rapid radiation in the genus Thomomys (Rodentia: Geomyidae). Syst. Biol. 2008, 57:294-310.
-
(2008)
Syst. Biol.
, vol.57
, pp. 294-310
-
-
Belfiore, N.M.1
Liu, L.2
Moritz, C.3
-
3
-
-
74849122433
-
Biogeography of the Australian monsoon tropics
-
Bowman D.M.J.S., Brown G.K., Braby M.F., Brown J.R., Cook L.G., Crisp M.D., Ford F., Haberle S., Hughes J., Isagi Y., Joseph L., McBride J., Nelson G., Ladiges P.Y. Biogeography of the Australian monsoon tropics. J. Biogeogr 2010, 37:201-216.
-
(2010)
J. Biogeogr
, vol.37
, pp. 201-216
-
-
Bowman, D.M.J.S.1
Brown, G.K.2
Braby, M.F.3
Brown, J.R.4
Cook, L.G.5
Crisp, M.D.6
Ford, F.7
Haberle, S.8
Hughes, J.9
Isagi, Y.10
Joseph, L.11
McBride, J.12
Nelson, G.13
Ladiges, P.Y.14
-
4
-
-
53849128215
-
Comparison of species tree methods for reconstructing the phylogeny of bearded manikins (Aves: Pipridae: Manacus) from multilocus sequence data
-
Brumfield R.T., Liu L., Lum D.E., Edwards S.V. Comparison of species tree methods for reconstructing the phylogeny of bearded manikins (Aves: Pipridae: Manacus) from multilocus sequence data. Syst. Biol. 2008, 57:719-731.
-
(2008)
Syst. Biol.
, vol.57
, pp. 719-731
-
-
Brumfield, R.T.1
Liu, L.2
Lum, D.E.3
Edwards, S.V.4
-
5
-
-
53749086720
-
Birth of a biome: insights into the assembly and maintenance of the Australian arid zone biota
-
Byrne M., Yeates D.K., Joseph L., Kearney M., Bowler J., Williams M.A.J., Cooper S., Donnellan S.C., Keogh J.S., Leys R., Melville J., Murphy D.J., Porch N., Wyrwoll K.H. Birth of a biome: insights into the assembly and maintenance of the Australian arid zone biota. Mol. Ecol. 2008, 17:4398-4417.
-
(2008)
Mol. Ecol.
, vol.17
, pp. 4398-4417
-
-
Byrne, M.1
Yeates, D.K.2
Joseph, L.3
Kearney, M.4
Bowler, J.5
Williams, M.A.J.6
Cooper, S.7
Donnellan, S.C.8
Keogh, J.S.9
Leys, R.10
Melville, J.11
Murphy, D.J.12
Porch, N.13
Wyrwoll, K.H.14
-
6
-
-
80051671519
-
Decline of a biome: evolution, contraction, fragmentation, extinction and invasion of the Australian mesic zone biota
-
Byrne M., Steane D.A., Joseph L., Yeates D.K., Jordan G.J., Crayn D., Aplin K., Cantrill D.J., Cook L.G., Crisp M.D., Keogh S., Melville J., Moritz C., Porch N., Sniderman J.M.K., Sunnucks P., Weston P.H. Decline of a biome: evolution, contraction, fragmentation, extinction and invasion of the Australian mesic zone biota. J. Biog. 2011, 10.1111/j.1365-2699.2011.02535.x.
-
(2011)
J. Biog.
-
-
Byrne, M.1
Steane, D.A.2
Joseph, L.3
Yeates, D.K.4
Jordan, G.J.5
Crayn, D.6
Aplin, K.7
Cantrill, D.J.8
Cook, L.G.9
Crisp, M.D.10
Keogh, S.11
Melville, J.12
Moritz, C.13
Porch, N.14
Sniderman, J.M.K.15
Sunnucks, P.16
Weston, P.H.17
-
7
-
-
34848833473
-
On the phylogenetic position of the scrub-birds (Passeriformes: Menurae: Atrichornithidae) of Australia
-
Chesser R.T., ten Have J. On the phylogenetic position of the scrub-birds (Passeriformes: Menurae: Atrichornithidae) of Australia. J. Ornithol. 2007, 148:471-476. 10.1007/s10336-007-0174-9.
-
(2007)
J. Ornithol.
, vol.148
, pp. 471-476
-
-
Chesser, R.T.1
ten Have, J.2
-
8
-
-
0030749871
-
Relationships within the Australo-Papuanfairy-wrens (Aves: Malurinae): an evaluation of the utility of allozyme data
-
Christidis L., Schodde R. Relationships within the Australo-Papuanfairy-wrens (Aves: Malurinae): an evaluation of the utility of allozyme data. Aust. J. Zool. 1997, 45:113-129.
-
(1997)
Aust. J. Zool.
, vol.45
, pp. 113-129
-
-
Christidis, L.1
Schodde, R.2
-
9
-
-
78049410894
-
Plumage patterns are good indicators of taxonomic diversity, but not of phylogentic affinities, in Australian grasswrens Amytornis (Aves: Maluridae)
-
Christidis L., Rheindt F.E., Boles W.E., Norman J.A. Plumage patterns are good indicators of taxonomic diversity, but not of phylogentic affinities, in Australian grasswrens Amytornis (Aves: Maluridae). Mol. Phylogenet. Evol. 2010, 57:868-877.
-
(2010)
Mol. Phylogenet. Evol.
, vol.57
, pp. 868-877
-
-
Christidis, L.1
Rheindt, F.E.2
Boles, W.E.3
Norman, J.A.4
-
10
-
-
80055110784
-
Mitochondrial and nuclear DNA phylogenies reveal a complex evolutionary history in the Australasian robins (Passeriformes: Petroicidae)
-
Christidis L., Irestedt M., Rowe D., Boles W.E., Norman J.A. Mitochondrial and nuclear DNA phylogenies reveal a complex evolutionary history in the Australasian robins (Passeriformes: Petroicidae). Mol. Phylogenet. Evol. 2011, 61:726-738.
-
(2011)
Mol. Phylogenet. Evol.
, vol.61
, pp. 726-738
-
-
Christidis, L.1
Irestedt, M.2
Rowe, D.3
Boles, W.E.4
Norman, J.A.5
-
11
-
-
0033771358
-
TCS: a computer program to estimate gene genealogies
-
Clement M., Posada D., Crandall K.A. TCS: a computer program to estimate gene genealogies. Mol. Ecol. 2000, 9:1657-1659.
-
(2000)
Mol. Ecol.
, vol.9
, pp. 1657-1659
-
-
Clement, M.1
Posada, D.2
Crandall, K.A.3
-
12
-
-
0022823670
-
Origin and evolution of continental biotas: speciation and historical congruence within the Australian avifauna
-
Cracraft J. Origin and evolution of continental biotas: speciation and historical congruence within the Australian avifauna. Evolution 1986, 40:977-996.
-
(1986)
Evolution
, vol.40
, pp. 977-996
-
-
Cracraft, J.1
-
13
-
-
0026340249
-
Patterns of diversification within continental biotas: hierarchical congruence among the areas of endemism of Australian vertebrates
-
Cracraft J. Patterns of diversification within continental biotas: hierarchical congruence among the areas of endemism of Australian vertebrates. Aust. Syst. Bot. 1991, 4:211-227.
-
(1991)
Aust. Syst. Bot.
, vol.4
, pp. 211-227
-
-
Cracraft, J.1
-
14
-
-
12044258905
-
Intraspecific cladogram estimation: accuracy at higher levels of divergence
-
Crandall K.A. Intraspecific cladogram estimation: accuracy at higher levels of divergence. Syst. Biol. 1994, 43:222-235.
-
(1994)
Syst. Biol.
, vol.43
, pp. 222-235
-
-
Crandall, K.A.1
-
15
-
-
0029189766
-
Cladistic biogeography of plants in Australia and New Guinea: congruent pattern reveals two endemic tropical tracks
-
Crisp M.D., Linder H.P., Weston P.H. Cladistic biogeography of plants in Australia and New Guinea: congruent pattern reveals two endemic tropical tracks. Syst. Biol. 1995, 44:457-473.
-
(1995)
Syst. Biol.
, vol.44
, pp. 457-473
-
-
Crisp, M.D.1
Linder, H.P.2
Weston, P.H.3
-
16
-
-
0000008837
-
Phylogeography of mitochondrial DNA in two species of white-eyes in Australia
-
Degnan J.H., Moritz C. Phylogeography of mitochondrial DNA in two species of white-eyes in Australia. Auk 1992, 109:800-811.
-
(1992)
Auk
, vol.109
, pp. 800-811
-
-
Degnan, J.H.1
Moritz, C.2
-
17
-
-
84859855727
-
A species assemblage approach to comparative phylogeography of birds in southern Australia
-
Dolman G., Joseph L. A species assemblage approach to comparative phylogeography of birds in southern Australia. Ecol. Evol. 2012, 2:354-369.
-
(2012)
Ecol. Evol.
, vol.2
, pp. 354-369
-
-
Dolman, G.1
Joseph, L.2
-
18
-
-
33646904026
-
A multilocus perspective on refugial isolation and divergence in rainforest skinks (Carlia)
-
Dolman G., Moritz C. A multilocus perspective on refugial isolation and divergence in rainforest skinks (Carlia). Evolution 2006, 60:573-582.
-
(2006)
Evolution
, vol.60
, pp. 573-582
-
-
Dolman, G.1
Moritz, C.2
-
19
-
-
0036969229
-
Evolutionary relationships among blue- and black-plumaged populations of the white-winged fairy-wren (Malurus leucopterus)
-
Driskell A.C., Pruett-Jones S., Tarvin K.A., Hagevik S. Evolutionary relationships among blue- and black-plumaged populations of the white-winged fairy-wren (Malurus leucopterus). Aust. J. Zool. 2002, 50:581-595.
-
(2002)
Aust. J. Zool.
, vol.50
, pp. 581-595
-
-
Driskell, A.C.1
Pruett-Jones, S.2
Tarvin, K.A.3
Hagevik, S.4
-
20
-
-
79551505542
-
A multigene phylogeny examining evolutionary and ecological relationships in the Australo-papuan wrens of the subfamily Malurinae (Aves)
-
Driskell A.C., Norman J.A., Pruett-Jones S., Mangall E., Sonsthagen S., Christidis L. A multigene phylogeny examining evolutionary and ecological relationships in the Australo-papuan wrens of the subfamily Malurinae (Aves). Mol. Phylogenet. Evol. 2011, 60:480-485.
-
(2011)
Mol. Phylogenet. Evol.
, vol.60
, pp. 480-485
-
-
Driskell, A.C.1
Norman, J.A.2
Pruett-Jones, S.3
Mangall, E.4
Sonsthagen, S.5
Christidis, L.6
-
21
-
-
34547645438
-
Molecular evolutionary genomics of birds
-
Ellegren H. Molecular evolutionary genomics of birds. Cyto. Gen. Res. 2007, 117:120-130.
-
(2007)
Cyto. Gen. Res.
, vol.117
, pp. 120-130
-
-
Ellegren, H.1
-
22
-
-
33244495782
-
Accuracy of coalescent likelihood estimates: do we need more sites, more sequences, or more loci?
-
Felsenstein J. Accuracy of coalescent likelihood estimates: do we need more sites, more sequences, or more loci?. Mol. Biol. Evol. 2006, 23:691-700.
-
(2006)
Mol. Biol. Evol.
, vol.23
, pp. 691-700
-
-
Felsenstein, J.1
-
23
-
-
79951577346
-
Reconstructing the phylogeny of "Buarremon" brush-finches and near relatives (Aves, Emberizidae) from individual gene trees
-
Florez-Rodriguez A., Carling M.D., Cadena C.D. Reconstructing the phylogeny of "Buarremon" brush-finches and near relatives (Aves, Emberizidae) from individual gene trees. Mol. Phylogenet. Evol. 2011, 58:297-303.
-
(2011)
Mol. Phylogenet. Evol.
, vol.58
, pp. 297-303
-
-
Florez-Rodriguez, A.1
Carling, M.D.2
Cadena, C.D.3
-
24
-
-
0023529625
-
Minor isolates and minor geographical barriers in avian speciation in continental Australia
-
Ford J. Minor isolates and minor geographical barriers in avian speciation in continental Australia. Emu 1987, 87:90-102.
-
(1987)
Emu
, vol.87
, pp. 90-102
-
-
Ford, J.1
-
25
-
-
84971045197
-
Hybridisation between Malurus lamberti rogersi and Malurus lamberti assimilis in North-western Australia
-
Ford J., Johnstone R.E. Hybridisation between Malurus lamberti rogersi and Malurus lamberti assimilis in North-western Australia. Emu 1991, 91:251-254.
-
(1991)
Emu
, vol.91
, pp. 251-254
-
-
Ford, J.1
Johnstone, R.E.2
-
26
-
-
0842322955
-
Species-level paraphyly and polyphyly: frequency, causes and consequences, with insights from animal mitochondrial DNA
-
Funk D.J., Omland K.E. Species-level paraphyly and polyphyly: frequency, causes and consequences, with insights from animal mitochondrial DNA. Ann. Rev. Ecol. Evol. Syst. 2003, 34:397-423.
-
(2003)
Ann. Rev. Ecol. Evol. Syst.
, vol.34
, pp. 397-423
-
-
Funk, D.J.1
Omland, K.E.2
-
27
-
-
77953129949
-
Phylogeny and evolution of the Meliphagoidea, the largest radiation of Australasian songbirds
-
Gardner J.L., Trueman J.W.H., Ebert D., Joseph L., Magrath R.D. Phylogeny and evolution of the Meliphagoidea, the largest radiation of Australasian songbirds. Mol. Phylogenet. Evol. 2010, 55:1087-1102.
-
(2010)
Mol. Phylogenet. Evol.
, vol.55
, pp. 1087-1102
-
-
Gardner, J.L.1
Trueman, J.W.H.2
Ebert, D.3
Joseph, L.4
Magrath, R.D.5
-
28
-
-
0035576285
-
Prospects for nuclear gene phylogeography
-
Hare M.P. Prospects for nuclear gene phylogeography. Trends Ecol. Evol. 2001, 16:700-706.
-
(2001)
Trends Ecol. Evol.
, vol.16
, pp. 700-706
-
-
Hare, M.P.1
-
29
-
-
0035999488
-
Genetic evidence on the demography of speciation of allopatric dolphin species
-
Hare M.P., Cipriano F., Palumbi S.R. Genetic evidence on the demography of speciation of allopatric dolphin species. Evolution 2002, 56:804-816.
-
(2002)
Evolution
, vol.56
, pp. 804-816
-
-
Hare, M.P.1
Cipriano, F.2
Palumbi, S.R.3
-
30
-
-
84971046919
-
A re-examination of the chestnut-shouldered wren complex of Australia
-
Harrison C.J.O. A re-examination of the chestnut-shouldered wren complex of Australia. Bull. Brit. Mus. Zool. Ser. 1972, 21:313-328.
-
(1972)
Bull. Brit. Mus. Zool. Ser.
, vol.21
, pp. 313-328
-
-
Harrison, C.J.O.1
-
31
-
-
77249086587
-
Bayesian inference of species trees from multilocus data
-
Heled J., Drummond A.J. Bayesian inference of species trees from multilocus data. Mol. Biol. Evol. 2010, 27:570-580.
-
(2010)
Mol. Biol. Evol.
, vol.27
, pp. 570-580
-
-
Heled, J.1
Drummond, A.J.2
-
32
-
-
0022211482
-
Statistical properties of the number of recombination events in the history of a sample of DNA-sequences
-
Hudson R.R., Kaplan N.L. Statistical properties of the number of recombination events in the history of a sample of DNA-sequences. Genetics 1985, 111:147-164.
-
(1985)
Genetics
, vol.111
, pp. 147-164
-
-
Hudson, R.R.1
Kaplan, N.L.2
-
33
-
-
0034807708
-
A phylogeographic analysis of southern and eastern populations of the Australian magpie: evidence for selection in maintenance of the distribution of two morphs
-
Hughes J.M., Baker A.M., De Zylva G., Mather P.B. A phylogeographic analysis of southern and eastern populations of the Australian magpie: evidence for selection in maintenance of the distribution of two morphs. Biol. J. Linn. Soc. 2001, 74:25-34.
-
(2001)
Biol. J. Linn. Soc.
, vol.74
, pp. 25-34
-
-
Hughes, J.M.1
Baker, A.M.2
De Zylva, G.3
Mather, P.B.4
-
34
-
-
25644452054
-
Speciational history of Australian grass finches (Poephila) inferred from thirty gene trees
-
Jennings W.B., Edwards S.V. Speciational history of Australian grass finches (Poephila) inferred from thirty gene trees. Evolution 2005, 59:2033-2047.
-
(2005)
Evolution
, vol.59
, pp. 2033-2047
-
-
Jennings, W.B.1
Edwards, S.V.2
-
35
-
-
0027869907
-
Hybridization between the white-browed and Atherton scrubwrens: Detection with mitochondrial DNA
-
Joseph L., Moritz C. Hybridization between the white-browed and Atherton scrubwrens: Detection with mitochondrial DNA. Emu 1993, 93:93-99.
-
(1993)
Emu
, vol.93
, pp. 93-99
-
-
Joseph, L.1
Moritz, C.2
-
36
-
-
0027611672
-
Phylogeny and historical aspects of the ecology of eastern Australian scrubwrens Sericornis spp. - evidence from mitochondrial DNA
-
Joseph L., Moritz C. Phylogeny and historical aspects of the ecology of eastern Australian scrubwrens Sericornis spp. - evidence from mitochondrial DNA. Mol. Ecol. 1993, 2:161-170.
-
(1993)
Mol. Ecol.
, vol.2
, pp. 161-170
-
-
Joseph, L.1
Moritz, C.2
-
37
-
-
0028160637
-
Mitochondrial DNA phylogeography of birds of eastern Australian rainforests: first fragments
-
Joseph L., Moritz C. Mitochondrial DNA phylogeography of birds of eastern Australian rainforests: first fragments. Aust. J. Zool. 1994, 42:385-403.
-
(1994)
Aust. J. Zool.
, vol.42
, pp. 385-403
-
-
Joseph, L.1
Moritz, C.2
-
38
-
-
62249094504
-
Phylogeography: its development and impact in Australo-Papuan ornithology with special reference to paraphyly in Australian birds
-
Joseph L., Omland K.E. Phylogeography: its development and impact in Australo-Papuan ornithology with special reference to paraphyly in Australian birds. Emu 2009, 109:1-23.
-
(2009)
Emu
, vol.109
, pp. 1-23
-
-
Joseph, L.1
Omland, K.E.2
-
39
-
-
33644870643
-
Molecular resolution of population history, systematics and historical biogeography of the Australian ringneck parrots Barnardius: are we there yet?
-
Joseph L., Wilke T. Molecular resolution of population history, systematics and historical biogeography of the Australian ringneck parrots Barnardius: are we there yet?. Emu 2006, 106:49-62.
-
(2006)
Emu
, vol.106
, pp. 49-62
-
-
Joseph, L.1
Wilke, T.2
-
40
-
-
33947653226
-
Lack of phylogeographic structure in three widespread Australian birds reinforces emerging challenges in Australian historical biogeography
-
Joseph L., Wilke T. Lack of phylogeographic structure in three widespread Australian birds reinforces emerging challenges in Australian historical biogeography. J. Biogeogr. 2007, 34:612-624.
-
(2007)
J. Biogeogr.
, vol.34
, pp. 612-624
-
-
Joseph, L.1
Wilke, T.2
-
41
-
-
33750557664
-
Implications of mitochondrial DNA polyphyly in two ecologically undifferentiated but morphologically distinct migratory birds, the masked and white-browed woodswallows Artamus spp. of inland Australia
-
Joseph L., Wilke T., Have J.T., Chesser R.T. Implications of mitochondrial DNA polyphyly in two ecologically undifferentiated but morphologically distinct migratory birds, the masked and white-browed woodswallows Artamus spp. of inland Australia. J. Avian Biol. 2006, 37:625-636.
-
(2006)
J. Avian Biol.
, vol.37
, pp. 625-636
-
-
Joseph, L.1
Wilke, T.2
Have, J.T.3
Chesser, R.T.4
-
42
-
-
52749090706
-
Where and when does a ring start and end? Testing the ring-species hypothesis in a species complex of Australian parrots
-
Joseph L., Dolman G., Donnellan S., Saint K.M., Berg M.L., Bennett A.T.D. Where and when does a ring start and end? Testing the ring-species hypothesis in a species complex of Australian parrots. Proc. R. Soc. Lond. B 2008, 275:2431-2440.
-
(2008)
Proc. R. Soc. Lond. B
, vol.275
, pp. 2431-2440
-
-
Joseph, L.1
Dolman, G.2
Donnellan, S.3
Saint, K.M.4
Berg, M.L.5
Bennett, A.T.D.6
-
43
-
-
79957858338
-
Phylogeography and taxonomy of the Little Bronze-Cuckoo (Chalcites minutillus) in Australia's monsoon tropics
-
Joseph L., Zeriga T., Adcock G., Langmore N. Phylogeography and taxonomy of the Little Bronze-Cuckoo (Chalcites minutillus) in Australia's monsoon tropics. Emu - Aust. Ornithol. 2011, 111:113-119. 10.1071/MU10050.
-
(2011)
Emu - Aust. Ornithol.
, vol.111
, pp. 113-119
-
-
Joseph, L.1
Zeriga, T.2
Adcock, G.3
Langmore, N.4
-
45
-
-
58249100052
-
Inferring the phylogeography and evolutionary history of the splendid fairy-wren Malurus splendens from mitochondrial DNA and spectrophotometry
-
Kearns A.M., Joseph L., Edwards S.V., Double M.C. Inferring the phylogeography and evolutionary history of the splendid fairy-wren Malurus splendens from mitochondrial DNA and spectrophotometry. J. Avian Biol. 2009, 40:7-17.
-
(2009)
J. Avian Biol.
, vol.40
, pp. 7-17
-
-
Kearns, A.M.1
Joseph, L.2
Edwards, S.V.3
Double, M.C.4
-
46
-
-
78649582958
-
The impact of Pleistocene changes of climate and landscape on Australian birds: a test using the Pied Butcherbird (Cracticus nigrogularis)
-
Kearns A.M., Joseph L., Cook L.G. The impact of Pleistocene changes of climate and landscape on Australian birds: a test using the Pied Butcherbird (Cracticus nigrogularis). Emu 2010, 110:285-295.
-
(2010)
Emu
, vol.110
, pp. 285-295
-
-
Kearns, A.M.1
Joseph, L.2
Cook, L.G.3
-
47
-
-
81855207249
-
Testing the impact of transient Plio-Pleistocene barriers in monsoonal Australo-Papua: did mangrove habitats maintain genetic connectivity in the Black Butcherbird?
-
Kearns A., Joseph L., Omland K., Cook L. Testing the impact of transient Plio-Pleistocene barriers in monsoonal Australo-Papua: did mangrove habitats maintain genetic connectivity in the Black Butcherbird?. Mol. Ecol. 2011, 20:5042-5059. 10.1111/j.1365-294X.2011.05330.x.
-
(2011)
Mol. Ecol.
, vol.20
, pp. 5042-5059
-
-
Kearns, A.1
Joseph, L.2
Omland, K.3
Cook, L.4
-
48
-
-
84859855331
-
Bird Speciation on the Australian Continent
-
Museum of Comparative Zoology, Harvard, USA.
-
Keast, A., 1961. Bird Speciation on the Australian Continent. Museum of Comparative Zoology, Harvard, USA.
-
(1961)
-
-
Keast, A.1
-
49
-
-
57249086459
-
Divergence across Australia's Carpentarian barrier: statistical phylogeography of the red-backed fairy wren (Malurus melanocephalus)
-
Lee J.Y., Edwards S.V. Divergence across Australia's Carpentarian barrier: statistical phylogeography of the red-backed fairy wren (Malurus melanocephalus). Evolution 2008, 62:2953-3192.
-
(2008)
Evolution
, vol.62
, pp. 2953-3192
-
-
Lee, J.Y.1
Edwards, S.V.2
-
50
-
-
84863115972
-
A species tree for the Australo-Papuan fairy-wrens and allies
-
Lee J.Y., Joseph L., Edwards S.V. A species tree for the Australo-Papuan fairy-wrens and allies. Syst. Biol 2012, 10.1093/sysbio/syr101.
-
(2012)
Syst. Biol
-
-
Lee, J.Y.1
Joseph, L.2
Edwards, S.V.3
-
51
-
-
65649117685
-
DnaSP v5: a software for comprehensive analysis of DNA polymorphism data
-
Librado P., Rozas J. DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics 2009, 25:1451-1452.
-
(2009)
Bioinformatics
, vol.25
, pp. 1451-1452
-
-
Librado, P.1
Rozas, J.2
-
52
-
-
54949090066
-
BEST: Bayesian estimation of species trees under the coalescent model
-
Liu L. BEST: Bayesian estimation of species trees under the coalescent model. Bioinformatics 2008, 24:2542-2543.
-
(2008)
Bioinformatics
, vol.24
, pp. 2542-2543
-
-
Liu, L.1
-
53
-
-
67949103531
-
Multi-locus phylogeny clarifies the systematics of the Australo-Papuan robins (Family Petroicidae, Passeriformes)
-
Loynes K., Joseph L., Keogh S. Multi-locus phylogeny clarifies the systematics of the Australo-Papuan robins (Family Petroicidae, Passeriformes). Mol. Phylogen. Evol. 2009, 53:212-219. 10.1016/j.ympev.2009.05.012.
-
(2009)
Mol. Phylogen. Evol.
, vol.53
, pp. 212-219
-
-
Loynes, K.1
Joseph, L.2
Keogh, S.3
-
54
-
-
84970593933
-
Notes on the taxonomy of Neositta (Results of the Harold Hall Australian Expedition, No. 18)
-
Macdonald J.D. Notes on the taxonomy of Neositta (Results of the Harold Hall Australian Expedition, No. 18). Emu 1969, 69:169-174.
-
(1969)
Emu
, vol.69
, pp. 169-174
-
-
Macdonald, J.D.1
-
55
-
-
0006760527
-
A revision of the genus Malurus
-
Mack G. A revision of the genus Malurus. Mem. Nat. Mus. Melb. 1934, 8:100-125.
-
(1934)
Mem. Nat. Mus. Melb.
, vol.8
, pp. 100-125
-
-
Mack, G.1
-
56
-
-
84859872688
-
The number of Australian bird species
-
Mayr E., Serventy D.L. The number of Australian bird species. Emu 1944, 44:33-40.
-
(1944)
Emu
, vol.44
, pp. 33-40
-
-
Mayr, E.1
Serventy, D.L.2
-
57
-
-
15944416738
-
Is homoplasy or lineage sorting the source of incongruent mtDNA and nuclear gene trees in the stiff-tailed ducks (Nomonyx-Oxyura)?
-
McCracken K.G., Sorenson M. Is homoplasy or lineage sorting the source of incongruent mtDNA and nuclear gene trees in the stiff-tailed ducks (Nomonyx-Oxyura)?. Syst. Biol. 2005, 54:35-55.
-
(2005)
Syst. Biol.
, vol.54
, pp. 35-55
-
-
McCracken, K.G.1
Sorenson, M.2
-
58
-
-
73149117123
-
The causes of mitochondrial DNA gene tree paraphyly in birds
-
McKay B.D., Zink R.M. The causes of mitochondrial DNA gene tree paraphyly in birds. Mol. Phylogenet. Evol. 2010, 2010:647-650.
-
(2010)
Mol. Phylogenet. Evol.
, vol.2010
, pp. 647-650
-
-
McKay, B.D.1
Zink, R.M.2
-
59
-
-
0031773680
-
MODELTEST: testing the model of DNA substitution
-
Posada D., Crandall K.A. MODELTEST: testing the model of DNA substitution. Bioinformatics 1998, 14:817-818.
-
(1998)
Bioinformatics
, vol.14
, pp. 817-818
-
-
Posada, D.1
Crandall, K.A.2
-
60
-
-
0035139147
-
Intraspecific gene genealogies: trees grafting into networks
-
Posada D., Crandall K.A. Intraspecific gene genealogies: trees grafting into networks. Trends. Ecol. Evol. 2001, 16:37-45.
-
(2001)
Trends. Ecol. Evol.
, vol.16
, pp. 37-45
-
-
Posada, D.1
Crandall, K.A.2
-
61
-
-
84859846762
-
-
Tracer v1.5. Available from:
-
Rambaut, A., Drummond, A.J., 2007. Tracer v1.5. Available from: http://beast.bio.ed.ac.uk/Tracer.
-
(2007)
-
-
Rambaut, A.1
Drummond, A.J.2
-
62
-
-
0041386108
-
Mr Bayes 3: Bayesian phylogenetic inference under mixed models
-
Ronquist F., Heulsenbeck J.P. Mr Bayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 2003, 19:1572-1574.
-
(2003)
Bioinformatics
, vol.19
, pp. 1572-1574
-
-
Ronquist, F.1
Heulsenbeck, J.P.2
-
63
-
-
84859830218
-
-
MrBayes 3.1 Manual. School of Computational Science, Florida State University
-
Ronquist, F., Huelsenbeck, J.P., van der Mark, P., 2005. MrBayes 3.1 Manual. School of Computational Science, Florida State University, p. 64.
-
(2005)
, pp. 64
-
-
Ronquist, F.1
Huelsenbeck, J.P.2
van der Mark, P.3
-
64
-
-
33846196284
-
Genetic affinities among subspecies of a widespread Australian lycaenid butterfly, Ogyris amaryllis (Hewitson)
-
Schmidt D.J., Hughes J.M. Genetic affinities among subspecies of a widespread Australian lycaenid butterfly, Ogyris amaryllis (Hewitson). Aust. J. Zool. 2006, 54:429-446.
-
(2006)
Aust. J. Zool.
, vol.54
, pp. 429-446
-
-
Schmidt, D.J.1
Hughes, J.M.2
-
65
-
-
0003517341
-
The Directory of Australian birds. A Taxonomic and Zoogeographic Atlas of the Biodiversity of Birds in Australia and Its Territories
-
Passerines. CSIRO Publishing, Melbourne.
-
Schodde, R., Mason, I.J., 1999. The Directory of Australian birds. A Taxonomic and Zoogeographic Atlas of the Biodiversity of Birds in Australia and Its Territories. Passerines. CSIRO Publishing, Melbourne.
-
(1999)
-
-
Schodde, R.1
Mason, I.J.2
-
66
-
-
0003466707
-
The Fairy-Wrens: A Monograph of the Maluridae.
-
Lansdowne Editions, Melbourne.
-
Schodde, R., Weatherly, R., 1982. The Fairy-Wrens: A Monograph of the Maluridae. Lansdowne Editions, Melbourne.
-
(1982)
-
-
Schodde, R.1
Weatherly, R.2
-
67
-
-
84970613991
-
The evolution of the Chestnut-shouldered Wrens (Malurus)
-
Serventy D.L. The evolution of the Chestnut-shouldered Wrens (Malurus). Emu 1951, 51:113-120.
-
(1951)
Emu
, vol.51
, pp. 113-120
-
-
Serventy, D.L.1
-
68
-
-
0032766857
-
Multiple comparisons of log-likelihoods with applications to phylogenetic inference
-
Shimodaira H., Hasegawa M. Multiple comparisons of log-likelihoods with applications to phylogenetic inference. Mol. Biol. Evol. 1999, 16:1114-1116.
-
(1999)
Mol. Biol. Evol.
, vol.16
, pp. 1114-1116
-
-
Shimodaira, H.1
Hasegawa, M.2
-
69
-
-
1642362564
-
Clade-limited colonization in brood parasitic finches (Vidua spp.)
-
Sorenson M., Balakrishnan C.N., Payne R.B. Clade-limited colonization in brood parasitic finches (Vidua spp.). Syst. Biol. 2004, 53:140-153.
-
(2004)
Syst. Biol.
, vol.53
, pp. 140-153
-
-
Sorenson, M.1
Balakrishnan, C.N.2
Payne, R.B.3
-
70
-
-
33750403801
-
RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
-
Stamatakis A. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 2006, 22:2688-2690.
-
(2006)
Bioinformatics
, vol.22
, pp. 2688-2690
-
-
Stamatakis, A.1
-
71
-
-
50249100595
-
A rapid bootstrap algorithm for the RAxML web servers
-
Stamatakis A., Hoover P., Rougemont J. A rapid bootstrap algorithm for the RAxML web servers. Syst. Biol. 2008, 57:758-771.
-
(2008)
Syst. Biol.
, vol.57
, pp. 758-771
-
-
Stamatakis, A.1
Hoover, P.2
Rougemont, J.3
-
72
-
-
0242691208
-
A comparison of Bayesian methods for haplotype reconstruction
-
Stephens M., Donnelly P. A comparison of Bayesian methods for haplotype reconstruction. Am. J. Hum. Gen. 2003, 73:1162-1169.
-
(2003)
Am. J. Hum. Gen.
, vol.73
, pp. 1162-1169
-
-
Stephens, M.1
Donnelly, P.2
-
73
-
-
84859872689
-
-
PAUP*. Phylogenetic Analysis Using Parsimony (*and Other Methods). Version 4b10. Sinauer Associates, Sunderland, Massachusetts.
-
Swofford, D.L., 2003. PAUP*. Phylogenetic Analysis Using Parsimony (*and Other Methods). Version 4b10. Sinauer Associates, Sunderland, Massachusetts.
-
(2003)
-
-
Swofford, D.L.1
-
74
-
-
0027278852
-
A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping. IV. Nested analyses with cladogram uncertainty and recombination
-
Templeton A.R., Sing C.F. A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping. IV. Nested analyses with cladogram uncertainty and recombination. Genetics 1993, 134:659-669.
-
(1993)
Genetics
, vol.134
, pp. 659-669
-
-
Templeton, A.R.1
Sing, C.F.2
-
75
-
-
34250173496
-
Pleistocene refugia in an arid landscape: analysis of a widely distributed Australian passerine
-
Toon A., Mather P.B., Baker A.M., Durrant K.L., Hughes J.M. Pleistocene refugia in an arid landscape: analysis of a widely distributed Australian passerine. Mol. Ecol. 2007, 16:2525-2541.
-
(2007)
Mol. Ecol.
, vol.16
, pp. 2525-2541
-
-
Toon, A.1
Mather, P.B.2
Baker, A.M.3
Durrant, K.L.4
Hughes, J.M.5
-
76
-
-
77954562166
-
Multilocus analysis of honeyeaters (Aves: Meliphagidae) highlights spatio-temporal heterogeneity in the influence of biogeographic barriers in the Australian monsoonal zone
-
Toon A., Hughes J.M., Joseph L. Multilocus analysis of honeyeaters (Aves: Meliphagidae) highlights spatio-temporal heterogeneity in the influence of biogeographic barriers in the Australian monsoonal zone. Mol. Ecol. 2010, 19:2980-2994.
-
(2010)
Mol. Ecol.
, vol.19
, pp. 2980-2994
-
-
Toon, A.1
Hughes, J.M.2
Joseph, L.3
-
77
-
-
0036841106
-
Evolutionary dynamics of intron size, genome size, and physiological correlates in Archosaurs
-
Waltari E., Edwards S.V. Evolutionary dynamics of intron size, genome size, and physiological correlates in Archosaurs. Am. Nat. 2002, 160:539-552.
-
(2002)
Am. Nat.
, vol.160
, pp. 539-552
-
-
Waltari, E.1
Edwards, S.V.2
-
78
-
-
43049101093
-
Calibrating the avian molecular clock
-
Weir J.T., Schluter D. Calibrating the avian molecular clock. Mol. Ecol. 2008, 17:2321-2328.
-
(2008)
Mol. Ecol.
, vol.17
, pp. 2321-2328
-
-
Weir, J.T.1
Schluter, D.2
-
79
-
-
52449084460
-
A multilocus molecular phylogeny of the parrots (Psittaciformes): support for a Gondwanan origin during the Cretaceous
-
Wright T.F., Schirtzinger E.E., Matsumoto T., Eberhard J.R., Graves G.R., Sanchez J.J., Capelli S., Mueller H., Scharpegge J., Chambers G.K., Fleischer R.C. A multilocus molecular phylogeny of the parrots (Psittaciformes): support for a Gondwanan origin during the Cretaceous. Mol. Biol. Evol. 2008, 25:2141-2156.
-
(2008)
Mol. Biol. Evol.
, vol.25
, pp. 2141-2156
-
-
Wright, T.F.1
Schirtzinger, E.E.2
Matsumoto, T.3
Eberhard, J.R.4
Graves, G.R.5
Sanchez, J.J.6
Capelli, S.7
Mueller, H.8
Scharpegge, J.9
Chambers, G.K.10
Fleischer, R.C.11
-
80
-
-
78649664210
-
Additional data for nuclear DNA give new insights into the phylogenetic position of Sorex granarius within the Sorex araneus group
-
Yannic G., Dubey S., Hausser J., Basset P. Additional data for nuclear DNA give new insights into the phylogenetic position of Sorex granarius within the Sorex araneus group. Mol. Phylogenet. Evol. 2010, 10.1016/j.ympev.2010.09.015.
-
(2010)
Mol. Phylogenet. Evol.
-
-
Yannic, G.1
Dubey, S.2
Hausser, J.3
Basset, P.4
-
81
-
-
42449136665
-
Mitochondrial DNA under siege in avian phylogeography
-
Zink R.M., Barrowclough G.F. Mitochondrial DNA under siege in avian phylogeography. Mol. Ecol. 2008, 17:2107-2121.
-
(2008)
Mol. Ecol.
, vol.17
, pp. 2107-2121
-
-
Zink, R.M.1
Barrowclough, G.F.2
|