Blautia stercoris sp. nov., isolated from human faeces

International Journal of Systematic and Evolutionary Microbiology

Volumn 62, Issue 4, 2012, Pages 776-779

  Park, Seong Kyu ^a   Kim, Min Soo ^a   Roh, Seong Woon ^a   Bae, Jin Woo ^a  

^a Kyung Hee University   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

ACETIC ACID; BACTERIAL DNA; CARBOHYDRATE; CATALASE; FATTY ACID; GENOMIC DNA; GLUCOSE; OXIDOREDUCTASE; RNA 16S;

ARTICLE; BACTERIAL STRAIN; BACTERIUM ISOLATE; BLAUTIA STERCORIS; ENZYME ACTIVITY; FECES; FERMENTATION; GENE SEQUENCE; LACHNOSPIRACEAE; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PRIORITY JOURNAL;

ACETIC ACID; ADULT; BACTERIA, ANAEROBIC; BASE COMPOSITION; DNA, BACTERIAL; FATTY ACIDS; FECES; FERMENTATION; GENOTYPE; GRAM-POSITIVE BACTERIA; HUMANS; MALE; MOLECULAR SEQUENCE DATA; PHYLOGENY; REPUBLIC OF KOREA; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA;

BACTERIA (MICROORGANISMS); LACHNOSPIRACEAE;

EID: 84859711470     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.031625-0     Document Type: Article

References (23)

1. Andersson, A. F., Lindberg, M., Jakobsson, H., Bäckhed, F., Nyrén, P. & Engstrand, L. (2008). Comparative analysis of human gut microbiota by barcoded pyrosequencing. PLoS ONE 3, e2836.
2. Baker, G. C., Smith, J. J. & Cowan, D. A. (2003). Review and re-analysis of domain-specific 16S primers. J Microbiol Methods 55, 541-555.
3. Chun, J., Lee, J. H., Jung, Y., Kim, M., Kim, S., Kim, B. K. & Lim, Y. W. (2007). EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences. Int J Syst Evol Microbiol 57, 2259-2261.
4. Eckburg, P. B., Bik, E. M., Bernstein, C. N., Purdom, E., Dethlefsen, L., Sargent, M., Gill, S. R., Nelson, K. E. & Relman, D. A. (2005). Diversity of the human intestinal microbial flora. Science 308, 1635-1638.
5. Furuya, H., Ide, Y., Hamamoto, M., Asanuma, N. & Hino, T. (2010). Isolation of a novel bacterium, Blautia glucerasei sp. nov., hydrolyzing plant glucosylceramide to ceramide. Arch Microbiol 192, 365-372.
6. Gill, S. R., Pop, M., Deboy, R. T., Eckburg, P. B., Turnbaugh, P. J., Samuel, B. S., Gordon, J. I., Relman, D. A., Fraser-Liggett, C. M. & Nelson, K. E. (2006). Metagenomic analysis of the human distal gut microbiome. Science 312, 1355-1359.
7. Gonzalez, J. M. & Saiz-Jimenez, C. (2002). A fluorimetric method for the estimation of G+C mol% content in microorganisms by thermal denaturation temperature. Environ Microbiol 4, 770-773.
8. Gosalbes, M. J., Durbán, A., Pignatelli, M., Abellan, J. J., Jiménez-Hernández, N., Pérez-Cobas, A. E., Latorre, A. & Moya, A. (2011). Metatranscriptomic approach to analyze the functional human gut microbiota. PLoS ONE 6, e17447.
9. Guerrant, G. O., Lambert, M. A. & Moss, C. W. (1982). Analysis of short-chain acids from anaerobic bacteria by high-performance liquid chromatography. J Clin Microbiol 16, 355-360.
10. Kluge, A. G. & Farris, F. S. (1969). Quantitative phyletics and the evolution of anurans. Syst Zool 18, 1-32.
11. Kurokawa, K., Itoh, T., Kuwahara, T., Oshima, K., Toh, H., Toyoda, A., Takami, H., Morita, H., Sharma, V. K. & other authors (2007). Comparative metagenomics revealed commonly enriched gene sets in human gut microbiomes. DNA Res 14, 169-181.
12. Lay, C., Sutren, M., Rochet, V., Saunier, K., Doré, J. & Rigottier-Gois, L. (2005). Design and validation of 16S rRNA probes to enumerate members of the Clostridium leptum subgroup in human faecal microbiota. Environ Microbiol 7, 933-946.
13. Liu, C., Finegold, S. M., Song, Y. & Lawson, P. A. (2008). Reclassification of Clostridium coccoides, Ruminococcus hansenii, Ruminococcus hydrogenotrophicus, Ruminococcus luti, Ruminococcus productus and Ruminococcus schinkii as Blautia coccoides gen. nov., comb. nov., Blautia hansenii comb. nov., Blautia hydrogenotrophica comb. nov., Blautia luti comb. nov., Blautia producta comb. nov., Blautia schinkii comb. nov. and description of Blautia wexlerae sp. nov., isolated from human faeces. Int J Syst Evol Microbiol 58, 1896-1902.
14. MIDI (1999). Sherlock Microbial Identification System Operating Manual, version 3.0. Newark, DE: MIDI, Inc.
15. Qin, J., Li, R., Raes, J., Arumugam, M., Burgdorf, K. S., Manichanh, C., Nielsen, T., Pons, N., Levenez, F. & other authors (2010). A human gut microbial gene catalogue established by metagenomic sequencing. Nature 464, 59-65.
16. Rajilić-Stojanović, M., Smidt, H. & de Vos, W. M. (2007). Diversity of the human gastrointestinal tract microbiota revisited. Environ Microbiol 9, 2125-2136.
17. Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
18. Suau, A., Bonnet, R., Sutren, M., Godon, J. J., Gibson, G. R., Collins, M. D. & Doré, J. (1999). Direct analysis of genes encoding 16S rRNA from complex communities reveals many novel molecular species within the human gut. Appl Environ Microbiol 65, 4799-4807.
19. Tamura, K., Dudley, J., Nei, M. & Kumar, S. (2007). mega4: molecular evolutionary genetics analysis (mega) software version 4.0. Mol Biol Evol 24, 1596-1599.
20. Tap, J., Mondot, S., Levenez, F., Pelletier, E., Caron, C., Furet, J. P., Ugarte, E., Muñoz-Tamayo, R., Paslier, D. L. & other authors (2009). Towards the human intestinal microbiota phylogenetic core. Environ Microbiol 11, 2574-2584.
21. Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The clustal_x windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
22. Wang, M., Ahrné, S., Jeppsson, B. & Molin, G. (2005). Comparison of bacterial diversity along the human intestinal tract by direct cloning and sequencing of 16S rRNA genes. FEMS Microbiol Ecol 54, 219-231.
23. Zoetendal, E. G., von Wright, A., Vilpponen-Salmela, T., Ben-Amor, K., Akkermans, A. D. & de Vos, W. M. (2002). Mucosa-associated bacteria in the human gastrointestinal tract are uniformly distributed along the colon and differ from the community recovered from feces. Appl Environ Microbiol 68, 3401-3407.