메뉴 건너뛰기




Volumn 7, Issue 4, 2012, Pages

Computational modeling-based discovery of novel classes of anti-inflammatory drugs that target lanthionine synthetase C-like protein 2

Author keywords

[No Author keywords available]

Indexed keywords

ADENYLATE CYCLASE; ANTIINFLAMMATORY AGENT; CD11B ANTIGEN; CYCLIC AMP; DEXTRAN SULFATE; INTERLEUKIN 10; LANTHIONINE SYNTHETASE C LIKE PROTEIN 2; LUCIFERASE; MEMBRANE ENZYME; NSC 61610; NUTRACEUTICAL; PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA; UNCLASSIFIED DRUG; CELL SURFACE RECEPTOR; LANCL2 PROTEIN, MOUSE;

EID: 84859609283     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0034643     Document Type: Article
Times cited : (38)

References (44)
  • 2
    • 0032506996 scopus 로고    scopus 로고
    • Isolation, molecular characterization, and tissue-specific expression of a novel putative G protein-coupled receptor
    • Mayer H, Salzer U, Breuss J, Ziegler S, Marchler-Bauer A, et al. (1998) Isolation, molecular characterization, and tissue-specific expression of a novel putative G protein-coupled receptor. Biochim Biophys Acta 1395: 301-308.
    • (1998) Biochim Biophys Acta , vol.1395 , pp. 301-308
    • Mayer, H.1    Salzer, U.2    Breuss, J.3    Ziegler, S.4    Marchler-Bauer, A.5
  • 3
    • 0035238674 scopus 로고    scopus 로고
    • Molecular cloning, characterization, and tissue-specific expression of human LANCL2, a novel member of the LanC-like protein family
    • Mayer H, Pongratz M, Prohaska R, (2001) Molecular cloning, characterization, and tissue-specific expression of human LANCL2, a novel member of the LanC-like protein family. DNA Seq 12: 161-166.
    • (2001) DNA Seq , vol.12 , pp. 161-166
    • Mayer, H.1    Pongratz, M.2    Prohaska, R.3
  • 4
    • 0037310181 scopus 로고    scopus 로고
    • Lanthionine synthetase components C-like 2 increases cellular sensitivity to adriamycin by decreasing the expression of P-glycoprotein through a transcription-mediated mechanism
    • Park S, James CD, (2003) Lanthionine synthetase components C-like 2 increases cellular sensitivity to adriamycin by decreasing the expression of P-glycoprotein through a transcription-mediated mechanism. Cancer Res 63: 723-727.
    • (2003) Cancer Res , vol.63 , pp. 723-727
    • Park, S.1    James, C.D.2
  • 5
    • 33750511318 scopus 로고    scopus 로고
    • Myristoylation of human LanC-like protein 2 (LANCL2) is essential for the interaction with the plasma membrane and the increase in cellular sensitivity to adriamycin
    • Landlinger C, Salzer U, Prohaska R, (2006) Myristoylation of human LanC-like protein 2 (LANCL2) is essential for the interaction with the plasma membrane and the increase in cellular sensitivity to adriamycin. Biochim Biophys Acta 1758: 1759-1767.
    • (2006) Biochim Biophys Acta , vol.1758 , pp. 1759-1767
    • Landlinger, C.1    Salzer, U.2    Prohaska, R.3
  • 6
    • 70350504374 scopus 로고    scopus 로고
    • LANCL2 is necessary for abscisic acid binding and signaling in human granulocytes and in rat insulinoma cells
    • Sturla L, Fresia C, Guida L, Bruzzone S, Scarfi S, et al. (2009) LANCL2 is necessary for abscisic acid binding and signaling in human granulocytes and in rat insulinoma cells. J Biol Chem 284: 28045-28057.
    • (2009) J Biol Chem , vol.284 , pp. 28045-28057
    • Sturla, L.1    Fresia, C.2    Guida, L.3    Bruzzone, S.4    Scarfi, S.5
  • 8
    • 78951490677 scopus 로고    scopus 로고
    • Abscisic acid regulates inflammation via ligand-binding domain-independent activation of peroxisome proliferator-activated receptor gamma
    • Bassaganya-Riera J, Guri AJ, Lu P, Climent M, Carbo A, et al. (2011) Abscisic acid regulates inflammation via ligand-binding domain-independent activation of peroxisome proliferator-activated receptor gamma. J Biol Chem 286: 2504-2516.
    • (2011) J Biol Chem , vol.286 , pp. 2504-2516
    • Bassaganya-Riera, J.1    Guri, A.J.2    Lu, P.3    Climent, M.4    Carbo, A.5
  • 10
    • 79954428171 scopus 로고    scopus 로고
    • Molecular modeling of lanthionine synthetase component C-like protein 2: a potential target for the discovery of novel type 2 diabetes prophylactics and therapeutics
    • Lu P, Bevan DR, Lewis SN, Hontecillas R, Bassaganya-Riera J, (2011) Molecular modeling of lanthionine synthetase component C-like protein 2: a potential target for the discovery of novel type 2 diabetes prophylactics and therapeutics. J Mol Model 17: 543-553.
    • (2011) J Mol Model , vol.17 , pp. 543-553
    • Lu, P.1    Bevan, D.R.2    Lewis, S.N.3    Hontecillas, R.4    Bassaganya-Riera, J.5
  • 11
    • 11144323163 scopus 로고    scopus 로고
    • Virtual screening of chemical libraries
    • Shoichet BK, (2004) Virtual screening of chemical libraries. Nature 432: 862-865.
    • (2004) Nature , vol.432 , pp. 862-865
    • Shoichet, B.K.1
  • 12
    • 61449156662 scopus 로고    scopus 로고
    • Protein crystallography in drug discovery
    • Canduri F, de Azevedo WF, (2008) Protein crystallography in drug discovery. Curr Drug Targets 9: 1048-1053.
    • (2008) Curr Drug Targets , vol.9 , pp. 1048-1053
    • Canduri, F.1    de Azevedo, W.F.2
  • 13
    • 0037235663 scopus 로고    scopus 로고
    • Protein-based virtual screening of chemical databases. II. Are homology models of G-Protein Coupled Receptors suitable targets?
    • Bissantz C, Bernard P, Hibert M, Rognan D, (2003) Protein-based virtual screening of chemical databases. II. Are homology models of G-Protein Coupled Receptors suitable targets? Proteins 50: 5-25.
    • (2003) Proteins , vol.50 , pp. 5-25
    • Bissantz, C.1    Bernard, P.2    Hibert, M.3    Rognan, D.4
  • 14
    • 43949095157 scopus 로고    scopus 로고
    • On the applicability of GPCR homology models to computer-aided drug discovery: a comparison between in silico and crystal structures of the beta2-adrenergic receptor
    • Costanzi S, (2008) On the applicability of GPCR homology models to computer-aided drug discovery: a comparison between in silico and crystal structures of the beta2-adrenergic receptor. J Med Chem 51: 2907-2914.
    • (2008) J Med Chem , vol.51 , pp. 2907-2914
    • Costanzi, S.1
  • 15
    • 0347123444 scopus 로고    scopus 로고
    • Ligand-supported homology modeling of g-protein-coupled receptor sites: models sufficient for successful virtual screening
    • Evers A, Klebe G, (2004) Ligand-supported homology modeling of g-protein-coupled receptor sites: models sufficient for successful virtual screening. Angew Chem Int Ed Engl 43: 248-251.
    • (2004) Angew Chem Int Ed Engl , vol.43 , pp. 248-251
    • Evers, A.1    Klebe, G.2
  • 16
    • 0037495033 scopus 로고    scopus 로고
    • Discovery of diverse thyroid hormone receptor antagonists by high-throughput docking
    • Schapira M, Raaka BM, Das S, Fan L, Totrov M, et al. (2003) Discovery of diverse thyroid hormone receptor antagonists by high-throughput docking. Proc Natl Acad Sci U S A 100: 7354-7359.
    • (2003) Proc Natl Acad Sci U S A , vol.100 , pp. 7354-7359
    • Schapira, M.1    Raaka, B.M.2    Das, S.3    Fan, L.4    Totrov, M.5
  • 17
    • 67149147296 scopus 로고    scopus 로고
    • Structure of human lanthionine synthetase C-like protein 1 and its interaction with Eps8 and glutathione
    • Zhang W, Wang L, Liu Y, Xu J, Zhu G, et al. (2009) Structure of human lanthionine synthetase C-like protein 1 and its interaction with Eps8 and glutathione. Genes Dev 23: 1387-1392.
    • (2009) Genes Dev , vol.23 , pp. 1387-1392
    • Zhang, W.1    Wang, L.2    Liu, Y.3    Xu, J.4    Zhu, G.5
  • 18
    • 13844312649 scopus 로고    scopus 로고
    • ZINC-a free database of commercially available compounds for virtual screening
    • Irwin JJ, Shoichet BK, (2005) ZINC-a free database of commercially available compounds for virtual screening. J Chem Inf Model 45: 177-182.
    • (2005) J Chem Inf Model , vol.45 , pp. 177-182
    • Irwin, J.J.1    Shoichet, B.K.2
  • 19
    • 70349932423 scopus 로고    scopus 로고
    • AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibility
    • Morris GM, Huey R, Lindstrom W, Sanner MF, Belew RK, et al. (2009) AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibility. J Comput Chem 30: 2785-2791.
    • (2009) J Comput Chem , vol.30 , pp. 2785-2791
    • Morris, G.M.1    Huey, R.2    Lindstrom, W.3    Sanner, M.F.4    Belew, R.K.5
  • 20
    • 76149120388 scopus 로고    scopus 로고
    • AutoDock Vina: improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading
    • Trott O, Olson AJ, (2010) AutoDock Vina: improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading. J Comput Chem 31: 455-461.
    • (2010) J Comput Chem , vol.31 , pp. 455-461
    • Trott, O.1    Olson, A.J.2
  • 21
    • 4444280899 scopus 로고    scopus 로고
    • Activation of PPAR gamma and delta by conjugated linoleic acid mediates protection from experimental inflammatory bowel disease
    • Bassaganya-Riera J, Reynolds K, Martino-Catt S, Cui Y, Hennighausen L, et al. (2004) Activation of PPAR gamma and delta by conjugated linoleic acid mediates protection from experimental inflammatory bowel disease. Gastroenterology 127: 777-791.
    • (2004) Gastroenterology , vol.127 , pp. 777-791
    • Bassaganya-Riera, J.1    Reynolds, K.2    Martino-Catt, S.3    Cui, Y.4    Hennighausen, L.5
  • 22
    • 40549130652 scopus 로고    scopus 로고
    • PDTD: a web-accessible protein database for drug target identification
    • Gao Z, Li H, Zhang H, Liu X, Kang L, et al. (2008) PDTD: a web-accessible protein database for drug target identification. BMC Bioinformatics 9: 104.
    • (2008) BMC Bioinformatics , vol.9 , pp. 104
    • Gao, Z.1    Li, H.2    Zhang, H.3    Liu, X.4    Kang, L.5
  • 23
    • 33747829590 scopus 로고    scopus 로고
    • TarFisDock: a web server for identifying drug targets with docking approach
    • Li H, Gao Z, Kang L, Zhang H, Yang K, et al. (2006) TarFisDock: a web server for identifying drug targets with docking approach. Nucleic Acids Res 34: W219-224.
    • (2006) Nucleic Acids Res , vol.34
    • Li, H.1    Gao, Z.2    Kang, L.3    Zhang, H.4    Yang, K.5
  • 24
    • 0035025191 scopus 로고    scopus 로고
    • DOCK 4.0: search strategies for automated molecular docking of flexible molecule databases
    • Ewing TJ, Makino S, Skillman AG, Kuntz ID, (2001) DOCK 4.0: search strategies for automated molecular docking of flexible molecule databases. J Comput Aided Mol Des 15: 411-428.
    • (2001) J Comput Aided Mol Des , vol.15 , pp. 411-428
    • Ewing, T.J.1    Makino, S.2    Skillman, A.G.3    Kuntz, I.D.4
  • 26
    • 32144432437 scopus 로고    scopus 로고
    • The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling
    • Arnold K, Bordoli L, Kopp J, Schwede T, (2006) The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling. Bioinformatics 22: 195-201.
    • (2006) Bioinformatics , vol.22 , pp. 195-201
    • Arnold, K.1    Bordoli, L.2    Kopp, J.3    Schwede, T.4
  • 28
    • 0032540222 scopus 로고    scopus 로고
    • Assessing protein structures with a non-local atomic interaction energy
    • Melo F, Feytmans E, (1998) Assessing protein structures with a non-local atomic interaction energy. J Mol Biol 277: 1141-1152.
    • (1998) J Mol Biol , vol.277 , pp. 1141-1152
    • Melo, F.1    Feytmans, E.2
  • 29
    • 0000243829 scopus 로고
    • PROCHECK: a program to check the stereochemical quality of protein structures
    • Laskowski R, MacArthur M, Moss D, Thornton J, (1993) PROCHECK: a program to check the stereochemical quality of protein structures. J Appl Cryst 26: 283-291.
    • (1993) J Appl Cryst , vol.26 , pp. 283-291
    • Laskowski, R.1    MacArthur, M.2    Moss, D.3    Thornton, J.4
  • 30
    • 39749200215 scopus 로고    scopus 로고
    • Loss of PPAR gamma in immune cells impairs the ability of abscisic acid to improve insulin sensitivity by suppressing monocyte chemoattractant protein-1 expression and macrophage infiltration into white adipose tissue
    • Guri AJ, Hontecillas R, Ferrer G, Casagran O, Wankhade U, et al. (2008) Loss of PPAR gamma in immune cells impairs the ability of abscisic acid to improve insulin sensitivity by suppressing monocyte chemoattractant protein-1 expression and macrophage infiltration into white adipose tissue. J Nutr Biochem 19: 216-228.
    • (2008) J Nutr Biochem , vol.19 , pp. 216-228
    • Guri, A.J.1    Hontecillas, R.2    Ferrer, G.3    Casagran, O.4    Wankhade, U.5
  • 31
    • 77955920362 scopus 로고    scopus 로고
    • Abscisic acid ameliorates experimental IBD by downregulating cellular adhesion molecule expression and suppressing immune cell infiltration
    • Guri AJ, Hontecillas R, Bassaganya-Riera J, (2010) Abscisic acid ameliorates experimental IBD by downregulating cellular adhesion molecule expression and suppressing immune cell infiltration. Clin Nutr 29: 824-831.
    • (2010) Clin Nutr , vol.29 , pp. 824-831
    • Guri, A.J.1    Hontecillas, R.2    Bassaganya-Riera, J.3
  • 32
    • 33846566783 scopus 로고    scopus 로고
    • Dietary abscisic acid ameliorates glucose tolerance and obesity-related inflammation in db/db mice fed high-fat diets
    • Guri AJ, Hontecillas R, Si H, Liu D, Bassaganya-Riera J, (2007) Dietary abscisic acid ameliorates glucose tolerance and obesity-related inflammation in db/db mice fed high-fat diets. Clin Nutr 26: 107-116.
    • (2007) Clin Nutr , vol.26 , pp. 107-116
    • Guri, A.J.1    Hontecillas, R.2    Si, H.3    Liu, D.4    Bassaganya-Riera, J.5
  • 33
    • 77957335787 scopus 로고    scopus 로고
    • Abscisic acid synergizes with rosiglitazone to improve glucose tolerance and down-modulate macrophage accumulation in adipose tissue: possible action of the cAMP/PKA/PPAR gamma axis
    • Guri AJ, Hontecillas R, Bassaganya-Riera J, (2010) Abscisic acid synergizes with rosiglitazone to improve glucose tolerance and down-modulate macrophage accumulation in adipose tissue: possible action of the cAMP/PKA/PPAR gamma axis. Clin Nutr 29: 646-653.
    • (2010) Clin Nutr , vol.29 , pp. 646-653
    • Guri, A.J.1    Hontecillas, R.2    Bassaganya-Riera, J.3
  • 34
    • 78249263857 scopus 로고    scopus 로고
    • Abscisic acid ameliorates atherosclerosis by suppressing macrophage and CD4+ T cell recruitment into the aortic wall
    • Guri AJ, Misyak SA, Hontecillas R, Hasty A, Liu D, et al. (2010) Abscisic acid ameliorates atherosclerosis by suppressing macrophage and CD4+ T cell recruitment into the aortic wall. J Nutr Biochem 21: 1178-1185.
    • (2010) J Nutr Biochem , vol.21 , pp. 1178-1185
    • Guri, A.J.1    Misyak, S.A.2    Hontecillas, R.3    Hasty, A.4    Liu, D.5
  • 36
    • 57749107690 scopus 로고    scopus 로고
    • Abscisic acid is an endogenous stimulator of insulin release from human pancreatic islets with cyclic ADP ribose as second messenger
    • Bruzzone S, Bodrato N, Usai C, Guida L, Moreschi I, et al. (2008) Abscisic acid is an endogenous stimulator of insulin release from human pancreatic islets with cyclic ADP ribose as second messenger. J Biol Chem 283: 32188-32197.
    • (2008) J Biol Chem , vol.283 , pp. 32188-32197
    • Bruzzone, S.1    Bodrato, N.2    Usai, C.3    Guida, L.4    Moreschi, I.5
  • 37
    • 33751071608 scopus 로고    scopus 로고
    • Critical role of MCP-1 in the pathogenesis of experimental colitis in the context of immune and enterochromaffin cells
    • Khan WI, Motomura Y, Wang H, El-Sharkawy RT, Verdu EF, et al. (2006) Critical role of MCP-1 in the pathogenesis of experimental colitis in the context of immune and enterochromaffin cells. Am J Physiol Gastrointest Liver Physiol 291: G803-811.
    • (2006) Am J Physiol Gastrointest Liver Physiol , vol.291
    • Khan, W.I.1    Motomura, Y.2    Wang, H.3    El-Sharkawy, R.T.4    Verdu, E.F.5
  • 38
    • 34548190038 scopus 로고    scopus 로고
    • Il-6 signaling in inflammatory bowel disease: pathophysiological role and clinical relevance
    • Mudter J, Neurath MF, (2007) Il-6 signaling in inflammatory bowel disease: pathophysiological role and clinical relevance. Inflamm Bowel Dis 13: 1016-1023.
    • (2007) Inflamm Bowel Dis , vol.13 , pp. 1016-1023
    • Mudter, J.1    Neurath, M.F.2
  • 39
    • 34547514211 scopus 로고    scopus 로고
    • IL-6-dependent and -independent pathways in the development of interleukin 17-producing T helper cells
    • Kimura A, Naka T, Kishimoto T, (2007) IL-6-dependent and-independent pathways in the development of interleukin 17-producing T helper cells. Proc Natl Acad Sci U S A 104: 12099-12104.
    • (2007) Proc Natl Acad Sci U S A , vol.104 , pp. 12099-12104
    • Kimura, A.1    Naka, T.2    Kishimoto, T.3
  • 40
    • 0033214776 scopus 로고    scopus 로고
    • Regulatory T cells and inflammatory bowel disease
    • Groux H, Powrie F, (1999) Regulatory T cells and inflammatory bowel disease. Immunol Today 20: 442-445.
    • (1999) Immunol Today , vol.20 , pp. 442-445
    • Groux, H.1    Powrie, F.2
  • 41
    • 55749091152 scopus 로고    scopus 로고
    • Regulatory T cells in inflammatory bowel disease
    • Boden EK, Snapper SB, (2008) Regulatory T cells in inflammatory bowel disease. Curr Opin Gastroenterol 24: 733-741.
    • (2008) Curr Opin Gastroenterol , vol.24 , pp. 733-741
    • Boden, E.K.1    Snapper, S.B.2
  • 43
    • 1542580481 scopus 로고    scopus 로고
    • IL-10 and its related cytokines for treatment of inflammatory bowel disease
    • Li MC, He SH, (2004) IL-10 and its related cytokines for treatment of inflammatory bowel disease. World J Gastroenterol 10: 620-625.
    • (2004) World J Gastroenterol , vol.10 , pp. 620-625
    • Li, M.C.1    He, S.H.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.