메뉴 건너뛰기




Volumn 9, Issue 69, 2012, Pages 624-639

Computability, Gödel's incompleteness theorem, and an inherent limit on the predictability of evolution

Author keywords

Computability; Evolutionary prediction; Evolutionary theory; Mathematical biology; Philosophy of logic; Progressive evolution

Indexed keywords

BIOPHYSICS; BIOTECHNOLOGY;

EID: 84859392242     PISSN: 17425689     EISSN: 17425662     Source Type: Journal    
DOI: 10.1098/rsif.2011.0479     Document Type: Review
Times cited : (23)

References (44)
  • 1
    • 0037180782 scopus 로고    scopus 로고
    • Macroevolution simulated with autonomously replicating computer programs
    • doi:10.1038/nature01151
    • Yedid, G. & Bell, G. 2002 Macroevolution simulated with autonomously replicating computer programs. Nature 420, 810-812. (doi:10.1038/nature01151)
    • (2002) Nature , vol.420 , pp. 810-812
    • Yedid, G.1    Bell, G.2
  • 3
    • 0028003496 scopus 로고
    • The arrival of the fittest: Towards a theory of biological organization
    • Fontana, W. & Buss, L. 1994 The arrival of the fittest: towards a theory of biological organization. Bull. Math. Biol. 56, 1-64.
    • (1994) Bull. Math. Biol. , vol.56 , pp. 1-64
    • Fontana, W.1    Buss, L.2
  • 4
    • 0029661332 scopus 로고    scopus 로고
    • Perspective: Complex adaptations and the evolution of evolvability
    • doi:10.2307/2410639
    • Wagner, G. P. & Altenberg, L. 1996 Perspective: complex adaptations and the evolution of evolvability. Evolution 50, 967-976. (doi:10.2307/2410639)
    • (1996) Evolution , vol.50 , pp. 967-976
    • Wagner, G.P.1    Altenberg, L.2
  • 6
    • 0029068905 scopus 로고
    • A classification of replicators and lambda-calculus models of biological organization
    • doi:10.1098/rspb.1995.0092
    • Szathmary, E. 1995 A classification of replicators and lambda-calculus models of biological organization. Proc. R. Soc. Lond. B 260, 279-286. (doi:10.1098/rspb.1995.0092)
    • (1995) Proc. R. Soc. Lond. B , vol.260 , pp. 279-286
    • Szathmary, E.1
  • 7
    • 54449096762 scopus 로고    scopus 로고
    • Prevolutionary dynamics and the origin of evolution
    • doi:10.1073/pnas.0806714105
    • Nowak, M. A. & Ohtsuki, H. 2008 Prevolutionary dynamics and the origin of evolution. Proc. Natl Acad. Sci. USA 105, 14 924-14 927. (doi:10.1073/pnas.0806714105)
    • (2008) Proc. Natl Acad. Sci. USA , vol.105 , pp. 14924-14927
    • Nowak, M.A.1    Ohtsuki, H.2
  • 8
    • 70449725265 scopus 로고    scopus 로고
    • Prelife catalysts and replicators
    • doi:10.1098/rspb.2009.1136
    • Ohtsuki, H. & Nowak, M. A. 2009 Prelife catalysts and replicators. Proc. R. Soc. B 276, 3783-3790. (doi:10.1098/rspb.2009.1136)
    • (2009) Proc. R. Soc. B , vol.276 , pp. 3783-3790
    • Ohtsuki, H.1    Nowak, M.A.2
  • 9
    • 58549097444 scopus 로고    scopus 로고
    • Originator dynamics
    • doi:10.1016/j.jtbi.2008.10.006
    • Manapat, M., Ohtsuki, H., Bürger, R. & Nowak, M. A. 2009 Originator dynamics. J. Theor. Biol. 256, 586-595. (doi:10.1016/j.jtbi.2008.10. 006)
    • (2009) J. Theor. Biol. , vol.256 , pp. 586-595
    • Manapat, M.1    Ohtsuki, H.2    Bürger, R.3    Nowak, M.A.4
  • 10
    • 0032556237 scopus 로고    scopus 로고
    • Shaping space: The possible and the attainable in RNA genotype-phenotype mapping
    • doi:10.1006/jtbi.1998.0771
    • Fontana, W. & Schuster, P. 1998 Shaping space: the possible and the attainable in RNA genotype-phenotype mapping. J. Theor. Biol. 194, 491-515. (doi:10.1006/jtbi.1998.0771)
    • (1998) J. Theor. Biol. , vol.194 , pp. 491-515
    • Fontana, W.1    Schuster, P.2
  • 11
    • 0035930008 scopus 로고    scopus 로고
    • The topology of the possible: Formal spaces underlying patterns of evolutionary change
    • doi:10.1006/jtbi.2001.2423
    • Stadler, B. M. R., Stadler, P. F., Wagner, G. P. & Fontana, W. 2001 The topology of the possible: formal spaces underlying patterns of evolutionary change. J. Theor. Biol. 213, 241-274. (doi:10.1006/jtbi.2001.2423)
    • (2001) J. Theor. Biol. , vol.213 , pp. 241-274
    • Stadler, B.M.R.1    Stadler, P.F.2    Wagner, G.P.3    Fontana, W.4
  • 12
    • 0037458350 scopus 로고    scopus 로고
    • Quasi-independence, homology and the unity of type: A topological theory of characters
    • doi:10.1006/jtbi.2003.3150
    • Wagner, G. P. & Stadler, P. F. 2003 Quasi-independence, homology and the unity of type: a topological theory of characters. J. Theor. Biol. 220, 505-527. (doi:10.1006/jtbi.2003.3150)
    • (2003) J. Theor. Biol. , vol.220 , pp. 505-527
    • Wagner, G.P.1    Stadler, P.F.2
  • 14
    • 0032577365 scopus 로고    scopus 로고
    • Continuity in evolution: On the nature of transitions
    • doi:10.1126/science.280.5368.1451
    • Fontana, W. & Schuster, P. 1998 Continuity in evolution: on the nature of transitions. Science 280, 1451-1455. (doi:10.1126/science.280.5368. 1451)
    • (1998) Science , vol.280 , pp. 1451-1455
    • Fontana, W.1    Schuster, P.2
  • 15
    • 0001359641 scopus 로고
    • Molecular evolution over the mutational landscape
    • doi:10.2307/2408444
    • Gillespie, J. H. 1984 Molecular evolution over the mutational landscape. Evolution 38, 1116-1129. (doi:10.2307/2408444)
    • (1984) Evolution , vol.38 , pp. 1116-1129
    • Gillespie, J.H.1
  • 16
    • 0031714655 scopus 로고    scopus 로고
    • The population genetics of adaptation: The distribution of factors fixed during adaptive evolution
    • doi:10.2307/2411226
    • Orr, H. A. 1998 The population genetics of adaptation: the distribution of factors fixed during adaptive evolution. Evolution 52, 935-949. (doi:10.2307/2411226)
    • (1998) Evolution , vol.52 , pp. 935-949
    • Orr, H.A.1
  • 17
    • 0036340979 scopus 로고    scopus 로고
    • The population genetics of adaptation: The adaptation of DNA sequences
    • Orr, H. A. 2002 The population genetics of adaptation: the adaptation of DNA sequences. Evolution 56, 1317-1330. (Pubitemid 34881586)
    • (2002) Evolution , vol.56 , Issue.7 , pp. 1317-1330
    • Orr, H.A.1
  • 18
    • 59449088633 scopus 로고    scopus 로고
    • A general extreme value theory model for the adaptation of DNA sequences under strong selection and weak mutation
    • doi:10.1534/genetics.108.088716
    • Joyce, P., Rokyta, D. R., Beisel, C. J. & Orr, H. A. 2008 A general extreme value theory model for the adaptation of DNA sequences under strong selection and weak mutation. Genetics 180, 1627-1643. (doi:10.1534/genetics.108. 088716)
    • (2008) Genetics , vol.180 , pp. 1627-1643
    • Joyce, P.1    Rokyta, D.R.2    Beisel, C.J.3    Orr, H.A.4
  • 19
    • 0033549752 scopus 로고    scopus 로고
    • Genome complexity, robustness and genetic interactions in digital organisms
    • doi:10.1038/23245
    • Lenski, R. E., Ofria, C., Collier, T. C. & Adami, C. 1999 Genome complexity, robustness and genetic interactions in digital organisms. Nature 400, 661-664. (doi:10.1038/23245)
    • (1999) Nature , vol.400 , pp. 661-664
    • Lenski, R.E.1    Ofria, C.2    Collier, T.C.3    Adami, C.4
  • 20
    • 0034997064 scopus 로고    scopus 로고
    • Microevolution in an electronic microcosm
    • doi:10.1086/319928
    • Yedid, G. & Bell, G. 2001 Microevolution in an electronic microcosm. Am. Nat. 157, 465-487. (doi:10.1086/319928)
    • (2001) Am. Nat. , vol.157 , pp. 465-487
    • Yedid, G.1    Bell, G.2
  • 21
    • 0035913336 scopus 로고    scopus 로고
    • Evolution of digital organisms at high mutation rates leads to survival of the flattest
    • doi:10.1038/35085569
    • Wilke, C. O., Wang, J. L., Ofria, C., Lenski, R. E. &Adami, C. 2001 Evolution of digital organisms at high mutation rates leads to survival of the flattest. Nature 412, 331-333. (doi:10.1038/35085569)
    • (2001) Nature , vol.412 , pp. 331-333
    • Wilke, C.O.1    Wang, J.L.2    Ofria, C.3    Lenski, R.E.4    Adami, C.5
  • 22
    • 0038668776 scopus 로고    scopus 로고
    • The evolutionary origin of complex features
    • doi:10.1038/nature01568
    • Lenski, R. E., Ofria, C., Pennock, R. T. & Adami, C. 2003 The evolutionary origin of complex features. Nature 423, 139-144. (doi:10.1038/nature01568)
    • (2003) Nature , vol.423 , pp. 139-144
    • Lenski, R.E.1    Ofria, C.2    Pennock, R.T.3    Adami, C.4
  • 23
    • 3042752559 scopus 로고    scopus 로고
    • Adaptive radiation from resource competition in digital organisms
    • doi:10.1126/science.1096307
    • Chow, S. S., Wilke, C. O., Ofria, C., Lenski, R. E. &Adami, C. 2004 Adaptive radiation from resource competition in digital organisms. Science 305, 84-86. (doi:10.1126/science.1096307)
    • (2004) Science , vol.305 , pp. 84-86
    • Chow, S.S.1    Wilke, C.O.2    Ofria, C.3    Lenski, R.E.4    Adami, C.5
  • 24
    • 33847735562 scopus 로고    scopus 로고
    • Ecological specialization and adaptive decay in digital organisms
    • doi:10.1086/510211
    • Ostrowski, E. A., Ofria, C. & Lenski, R. E. 2007 Ecological specialization and adaptive decay in digital organisms. Am. Nat. 169, E1-E20. (doi:10.1086/510211)
    • (2007) Am. Nat. , vol.169
    • Ostrowski, E.A.1    Ofria, C.2    Lenski, R.E.3
  • 25
    • 34248659392 scopus 로고    scopus 로고
    • Natural selection in chemical evolution
    • doi:10.1016/j.jtbi.2007.01.028
    • Fernando, C. & Rowe, J. 2007 Natural selection in chemical evolution. J. Theor. Biol. 247, 152-167. (doi:10.1016/j.jtbi.2007.01.028)
    • (2007) J. Theor. Biol. , vol.247 , pp. 152-167
    • Fernando, C.1    Rowe, J.2
  • 26
    • 49549084325 scopus 로고    scopus 로고
    • Historical and contingent factors affect re-evolution of a complex feature lost during mass extinction in communities of digital organisms
    • doi:10.1111/j.1420-9101.2008.01564.x
    • Yedid, G., Ofria, C. A. & Lenski, R. E. 2008 Historical and contingent factors affect re-evolution of a complex feature lost during mass extinction in communities of digital organisms. J. Evol. Biol. 21, 1335-1357. (doi:10.1111/j.1420-9101.2008.01564.x)
    • (2008) J. Evol. Biol. , vol.21 , pp. 1335-1357
    • Yedid, G.1    Ofria, C.A.2    Lenski, R.E.3
  • 27
    • 63449126094 scopus 로고    scopus 로고
    • Selective press extinctions, but not random pulse extinctions, cause delayed ecological recovery in communities of digital organisms
    • doi:10.1086/597228
    • Yedid, G., Ofria, C. A. & Lenski, R. E. 2009 Selective press extinctions, but not random pulse extinctions, cause delayed ecological recovery in communities of digital organisms. Am. Nat. 173, E139-E154. (doi:10.1086/597228)
    • (2009) Am. Nat. , vol.173
    • Yedid, G.1    Ofria, C.A.2    Lenski, R.E.3
  • 28
    • 0007024751 scopus 로고    scopus 로고
    • Human chauvinism
    • doi:10.2307/2411179
    • Dawkins, R. 1997 Human chauvinism. Evolution 51, 1015-1020. (doi:10.2307/2411179)
    • (1997) Evolution , vol.51 , pp. 1015-1020
    • Dawkins, R.1
  • 29
    • 0000015559 scopus 로고    scopus 로고
    • Self-help for a hedgehog stuck on a molehill
    • doi:10.2307/2411180
    • Gould, S. J. 1997 Self-help for a hedgehog stuck on a molehill. Evolution 51, 1020-1023. (doi:10.2307/2411180)
    • (1997) Evolution , vol.51 , pp. 1020-1023
    • Gould, S.J.1
  • 30
    • 0034712858 scopus 로고    scopus 로고
    • Evolution of biological complexity
    • doi:10.1073/pnas.97.9.4463
    • Adami, C., Ofria, C. & Collier, T. C. 2000 Evolution of biological complexity. Proc. Natl Acad. Sci. USA 97, 4463-4468. (doi:10.1073/pnas.97.9. 4463)
    • (2000) Proc. Natl Acad. Sci. USA , vol.97 , pp. 4463-4468
    • Adami, C.1    Ofria, C.2    Collier, T.C.3
  • 31
    • 75949146309 scopus 로고
    • The number of alleles that can be maintained in a finite population
    • Kimura, M. & Crow, J. 1964 The number of alleles that can be maintained in a finite population. Genetics 49, 725-738.
    • (1964) Genetics , vol.49 , pp. 725-738
    • Kimura, M.1    Crow, J.2
  • 32
    • 34347193348 scopus 로고
    • Über formal unentscheidbare Sátze der principia mathematica und verwandter systeme
    • doi:10.1007/BF01700692
    • Gödel, K. 1931 Über formal unentscheidbare Sátze der principia mathematica und verwandter systeme. Monatshefte für Mathematik und Physik 38, 173-198. (doi:10.1007/BF01700692)
    • (1931) Monatshefte für Mathematik und Physik , vol.38 , pp. 173-198
    • Gödel, K.1
  • 36
    • 84960561455 scopus 로고
    • On computable numbers, with an application to the Entscheidungsproblem
    • doi:10.1112/plms/s2-42.1.230
    • Turing, A. 1936 On computable numbers, with an application to the Entscheidungsproblem. Proc. Lond. Math. Soc. 42, 230-265. (doi:10.1112/plms/s2- 42.1.230)
    • (1936) Proc. Lond. Math. Soc. , vol.42 , pp. 230-265
    • Turing, A.1
  • 39
    • 0037079023 scopus 로고    scopus 로고
    • Escherichia coli K-12 undergoes adaptive evolution to achieve in silico predicted optimal growth
    • doi:10.1038/nature01149
    • Ibarra, R., Edwards, J. & Palsson, B. 2002 Escherichia coli K-12 undergoes adaptive evolution to achieve in silico predicted optimal growth. Nature 420, 186-189. (doi:10.1038/nature01149)
    • (2002) Nature , vol.420 , pp. 186-189
    • Ibarra, R.1    Edwards, J.2    Palsson, B.3
  • 40
    • 0024281037 scopus 로고
    • A free fitness that always increases in evolution
    • doi:10.1016/S0022-5193(88)80243-1
    • Iwasa, Y. 1988 A free fitness that always increases in evolution. J. Theor. Biol. 135, 265-281. (doi:10.1016/S0022-5193(88)80243-1)
    • (1988) J. Theor. Biol. , vol.135 , pp. 265-281
    • Iwasa, Y.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.