Ubiquitylation of drosophila p54/Rpn10/S5a regulates its interaction with the UBA-UBL polyubiquitin receptors

Biochemistry

Volumn 51, Issue 12, 2012, Pages 2461-2470

  Lipinszki, Zoltán ^a   Kovács, Levente ^a   Deák, Péter ^a   Udvardy, Andor ^a  

^a INSTITUTE OF EXPERIMENTAL MEDICINE   (Hungary)

Author keywords

[No Author keywords available]

Indexed keywords

26 S PROTEASOME; IN-VIVO; POLYUBIQUITIN; TRANSGENICS; UBIQUITIN-INTERACTING MOTIFS; UBIQUITIN-LIKE; UBIQUITYLATION;

BIOCHEMISTRY; CHEMISTRY;

AMINO ACIDS;

DROSOPHILA PROTEIN; LYSINE; POLYUBIQUITIN; PROTEASOME; PROTEIN P54; RPN10 PROTEIN; S5A PROTEIN; UNCLASSIFIED DRUG;

ARTICLE; DROSOPHILA; EUKARYOTE; INSECT; NONHUMAN; PHENOTYPE; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN INTERACTION; UBIQUITINATION;

AMINO ACID SEQUENCE; ANIMALS; BINDING SITES; CARRIER PROTEINS; CONSERVED SEQUENCE; DROSOPHILA MELANOGASTER; DROSOPHILA PROTEINS; HUMANS; MICE; MOLECULAR SEQUENCE DATA; POLYUBIQUITIN; PROTEIN BINDING; PROTEIN STRUCTURE, TERTIARY; PROTEIN SUBUNITS; PROTEIN TRANSPORT; RATS; UBIQUITINATION;

EUKARYOTA;

EID: 84859184764     PISSN: 00062960     EISSN: 15204995     Source Type: Journal    
DOI: 10.1021/bi3001006     Document Type: Article

References (30)

1. Ravid, T. and Hochstrasser, M. (2008) Diversity of degradation signals in the ubiquitin-proteasome system Nat. Rev. Mol. Cell Biol. 9, 679-690
2. Braun, B. C., Glickman, M., Kraft, R., Dahlmann, B., Kloetzel, P. M., Finley, D., and Schmidt, M. (1999) The base of the proteasome regulatory particle exhibits chaperone-like activity Nat. Cell Biol. 1, 221-226
3. Strickland, E., Hakala, K., Thomas, P. J., and DeMartino, G. N. (2000) Recognition of misfolding proteins by PA700, the regulatory subcomplex of the 26 S proteasome J. Biol. Chem. 275, 5565-5572
4. Verma, R., Aravind, L., Oania, R., McDonald, W. H., Yates, J. R., Koonin, E. V., and Deshaies, R. J. (2002) Role of Rpn11 metalloprotease in deubiquitination and degradation by the 26S proteasome Science 298, 611-615
5. Yao, T. T. and Cohen, R. E. (2002) A cryptic protease couples deubiquitination and degradation by the proteasome Nature 419, 403-407
6. Kohler, A., Cascio, P., Leggett, D. S., Woo, K. M., Goldberg, A. L., and Finley, D. (2001) The axial channel of the proteasome core particle is gated by the Rpt2 ATPase and controls both substrate entry and product release Mol. Cell 7, 1143-1152
7. Hochstrasser, M. (2006) Lingering mysteries of ubiquitin-chain assembly Cell 124, 27-34
8. Collins, G. A. and Tansey, W. P. (2006) The proteasome: A utility tool for transcription? Curr. Opin. Genet. Dev. 16, 197-202
9. Haracska, L. and Udvardy, A. (1995) Cloning and sequencing a non-ATPase subunit of the regulatory complex of the Drosophila 26-S protease Eur. J. Biochem. 231, 720-725
10. Lipinszki, Z., Kiss, P., Pal, M., Deak, P., Szabo, A., Hunyadi-Gulyas, E., Klement, E., Medzihradszky, K. F., and Udvardy, A. (2009) Developmental-stage-specific regulation of the polyubiquitin receptors in Drosophila melanogaster J. Cell Sci. 122, 3083-3092
11. vanNocker, S., Sadis, S., Rubin, D. M., Glickman, M., Fu, H. Y., Coux, O., Wefes, I., Finley, D., and Vierstra, R. D. (1996) The multiubiquitin-chain- binding protein Mcb1 is a component of the 265 proteasome in Saccharomyces cerevisiae and plays a nonessential, substrate-specific role in protein turnover Mol. Cell. Biol. 16, 6020-6028
12. vanNocker, S., Deveraux, Q., Rechsteiner, M., and Vierstra, R. D. (1996) Arabidopsis MBP1 gene encodes a conserved ubiquitin recognition component of the 26S proteasome Proc. Natl. Acad. Sci. U.S.A. 93, 856-860
13. 2+-induced reversible dissociation of subunit Rpn10/p54 of the Drosophila 26 S proteasome Biochem. J. 391, 301-310
14. Lipinszki, Z., Pál, M., Nagy, O., Deák, P., Hunyadi-Gulyas, E., and Udvardy, A. (2011) Overexpression of Dsk2/dUbqln results in severe developmental defects and lethality in Drosophila melanogaster that can be rescued by overexpression of the p54/Rpn10/S5a proteasomal subunit FEBS J. 278, 4833-4844
15. Spradling, A. C. (1986) in Drosophila: A Practical Approach (Roberts, D., Ed.) IRL Press, Oxford, U.K.
16. Ashburner, M. (1989) Drosophila: A Laboratory Handbook, Cold Spring Harbor Laboratory Press, Plainview, NY.
17. Lindsley, D. L. and Zimm, G. G. (1992) The Genome of Drosophila melanogaster, Academic Press, San Diego.
18. Duffy, J. B. (2002) GAL4 system in Drosophila: A fly geneticist's Swiss army knife Genesis 34, 1-15
19. Szlanka, T., Haracska, L., Kiss, I., Deak, P., Kurucz, E., Ando, I., Viragh, E., and Udvardy, A. (2003) Deletion of proteasomal subunit S5a/Rpn10/p54 causes lethality, multiple mitotic defects and overexpression of proteasomal genes in Drosophila melanogaster J. Cell Sci. 116, 1023-1033
20. Hartmann-Petersen, R. and Gordon, C. (2004) Ubiquitin-proteasome system: Proteins interacting with the 26S proteasome Cell. Mol. Life Sci. 61, 1589-1595
21. Hurley, J. H., Lee, S., and Prag, G. (2006) Ubiquitin-binding domains Biochem. J. 399, 361-372
22. Sakata, E., Bohn, S., Mihalache, O., Kiss, P., Beck, F., Nagy, I., Nickell, S., Tanaka, K., Saeki, Y., Förster, F., and Baumeister, W. (2012) Localization of the proteasomal ubiquitin receptors Rpn10 and Rpn13 by electron cryomicroscopy Proc. Natl. Acad. Sci. U.S.A. doi: 10.1073/pnas.1119394109
23. Crosas, B., Hanna, J., Kirkpatrick, D. S., Zhang, D. P., Tone, Y., Hathaway, N. A., Buecker, C., Leggett, D. S., Schmidt, M., King, R. W., Gygi, S. P., and Finley, D. (2006) Ubiquitin chains are remodeled at the proteasome by opposing ubiquitin ligase and deubiquitinating activities Cell 127, 1401-1413
24. Isasa, M., Katz, E. J., Kim, W., Yugo, V., Gonzalez, S., Kirkpatrick, D. S., Thomson, T. M., Finley, D., Gygi, S. P., and Crosas, B. (2010) Monoubiquitination of RPN10 Regulates Substrate Recruitment to the Proteasome Mol. Cell 38, 733-745
25. Danielsen, J. M. R., Sylvestersen, K. B., Bekker-Jensen, S., Szklarczyk, D., Poulsen, J. W., Horn, H., Jensen, L. J., Mailand, N., and Nielsen, M. L. (2011) Mass Spectrometric Analysis of Lysine Ubiquitylation Reveals Promiscuity at Site Level Mol. Cell. Proteomics 10, M110.003590
26. Franco, M., Seyfried, N. T., Brand, A. H., Peng, J., and Mayor, U. (2011) A novel strategy to isolate ubiquitin conjugates reveals wide role of ubiquitination during neural development Mol. Cell. Proteomics 10, M110.002188
27. Funakoshi, M., Sasaki, T., Nishimoto, T., and Kobayashi, H. (2002) Budding yeast Dsk2p is a polyubiquitin-binding protein that can interact with the proteasome Proc. Natl. Acad. Sci. U.S.A. 99, 745-750
28. Hamazaki, J., Sasaki, K., Kawahara, H., Hisanaga, S., Tanaka, K., and Murata, S. (2007) Rpn10-mediated degradation of ubiquitinated proteins is essential for mouse development Mol. Cell. Biol. 27, 6629-6638
29. Elsasser, S., Gali, R. R., Schwickart, M., Larsen, C. N., Leggett, D. S., Muller, B., Feng, M. T., Tubing, F., Dittmar, G. A. G., and Finley, D. (2002) Proteasome subunit Rpn1 binds ubiquitin-like protein domains Nat. Cell Biol. 4, 725-730
30. Matiuhin, Y., Kirkpatrick, D. S., Ziv, I., Kim, W., Dakshinamurthy, A., Kleifeld, O., Gygi, S. P., Reis, N., and Glickman, M. H. (2008) Extraproteasomal Rpn10 Restricts Access of the Polyubiquitin-Binding Protein Dsk2 to Proteasome Mol. Cell 32, 415-425