메뉴 건너뛰기




Volumn 21, Issue 7, 2012, Pages 1779-1788

Ecological drift and local exposures drive enteric bacterial community differences within species of Galápagos iguanas

Author keywords

bacteria; community ecology; DNA barcoding; microbial biology; reptiles; species interactions

Indexed keywords

BACTERIAL DNA; RNA 16S;

EID: 84859103152     PISSN: 09621083     EISSN: 1365294X     Source Type: Journal    
DOI: 10.1111/j.1365-294X.2012.05502.x     Document Type: Article
Times cited : (55)

References (58)
  • 1
    • 77957980539 scopus 로고    scopus 로고
    • Food-borne Enterococci integrate into oral biofilm: An in vivo study
    • Al-Ahmad A, Maier J, Follo M, et al. (2010) Food-borne Enterococci integrate into oral biofilm: An in vivo study. Journal of Endodontics, 36, 1813-1819.
    • (2010) Journal of Endodontics , vol.36 , pp. 1813-1819
    • Al-Ahmad, A.1    Maier, J.2    Follo, M.3
  • 2
    • 50949131523 scopus 로고    scopus 로고
    • Comparative analysis of human gut microbiota by barcoded pyrosequencing
    • Andersson AF, Lindberg M, Jakobsson H, et al. (2008) Comparative analysis of human gut microbiota by barcoded pyrosequencing. PLoS ONE, 3, e2836. doi:.
    • (2008) PLoS ONE , vol.3
    • Andersson, A.F.1    Lindberg, M.2    Jakobsson, H.3
  • 3
    • 78449296237 scopus 로고    scopus 로고
    • Individuality in gut microbiota composition is a complex polygenic trait shaped by multiple environmental and host genetic factors
    • Benson AK, Kelly SA, Legge R, et al. (2010) Individuality in gut microbiota composition is a complex polygenic trait shaped by multiple environmental and host genetic factors. Proceedings of the National Academy of Sciences of the United States of America, 107, 18933-18938.
    • (2010) Proceedings of the National Academy of Sciences of the United States of America , vol.107 , pp. 18933-18938
    • Benson, A.K.1    Kelly, S.A.2    Legge, R.3
  • 4
    • 0141457922 scopus 로고    scopus 로고
    • Community assembly: When should history matter?
    • DOI 10.1007/s00442-003-1311-7
    • Chase JM, (2003) Community assembly: when should history matter? Oecologia, 236, 489-498. (Pubitemid 37110754)
    • (2003) Oecologia , vol.136 , Issue.4 , pp. 489-498
    • Chase, J.M.1
  • 5
    • 0036724922 scopus 로고    scopus 로고
    • A Spatially Explicit Neutral Model of β-Diversity in Tropical Forests
    • DOI 10.1006/tpbi.2002.1597
    • Chave J, Leigh EG Jr, (2002) A spatially explicit neutral model of beta-diversity in tropical forests. Theoretical Population Biology, 62, 153-168. (Pubitemid 38051032)
    • (2002) Theoretical Population Biology , vol.62 , Issue.2 , pp. 153-168
    • Chave, J.1    Leigh Jr., E.G.2
  • 6
    • 0034467820 scopus 로고    scopus 로고
    • Biogeography and degree of endemicity of fluorescent Pseudomonas strains in soil
    • DOI 10.1128/AEM.66.12.5448-5456.2000
    • Cho JC, Tiedje JM, (2000) Biogeography and degree of endemicity of fluorescent Pseudomonas strains in soil. Applied and Environmental Microbiology, 66, 5448-5456. (Pubitemid 32217154)
    • (2000) Applied and Environmental Microbiology , vol.66 , Issue.12 , pp. 5448-5456
    • Cho, J.-C.1    Tiedje, J.M.2
  • 7
    • 0021533931 scopus 로고
    • Diet, digestion and food preferences of Galápagos land iguanas
    • Christian KA, Tracy CR, Porter WP, (1984) Diet, digestion and food preferences of Galápagos land iguanas. Herpetologica, 40, 205-212.
    • (1984) Herpetologica , vol.40 , pp. 205-212
    • Christian, K.A.1    Tracy, C.R.2    Porter, W.P.3
  • 8
    • 58149200948 scopus 로고    scopus 로고
    • The Ribosomal Database Project: Improved alignments and new tools for rRNA analysis
    • Cole JR, Wang Q, Cardenas E, et al. (2009) The Ribosomal Database Project: improved alignments and new tools for rRNA analysis. Nucleic Acids Research, 37, D141-D145.
    • (2009) Nucleic Acids Research , vol.37
    • Cole, J.R.1    Wang, Q.2    Cardenas, E.3
  • 10
    • 72949091232 scopus 로고    scopus 로고
    • Bacterial community variation in human body habitats across space and time
    • Costello EK, Lauber CL, Hamady M, et al. (2009) Bacterial community variation in human body habitats across space and time. Science, 326, 1694-1697.
    • (2009) Science , vol.326 , pp. 1694-1697
    • Costello, E.K.1    Lauber, C.L.2    Hamady, M.3
  • 12
    • 0002927705 scopus 로고
    • Island biogeography and the design of natural reserves
    • (ed. May R.M.), Blackwell Scientific, Oxford
    • Diamond JM, May RM, (1976) Island biogeography and the design of natural reserves. In: Theoretical Ecology: Principles and Applications (ed., May RM,), pp. 163-186. Blackwell Scientific, Oxford.
    • (1976) Theoretical Ecology: Principles and Applications , pp. 163-186
    • Diamond, J.M.1    May, R.M.2
  • 13
    • 68149128561 scopus 로고    scopus 로고
    • Empirical tests of metacommunity theory using an isolation gradient
    • Driscoll DA, Lindenmayer DB, (2009) Empirical tests of metacommunity theory using an isolation gradient. Ecological Monographs, 79, 485-501.
    • (2009) Ecological Monographs , vol.79 , pp. 485-501
    • Driscoll, D.A.1    Lindenmayer, D.B.2
  • 14
    • 77954423424 scopus 로고    scopus 로고
    • Intestinal microbiota of 6-week-old infants across Europe: Geographic influence beyond delivery mode, breast-feeding and antibiotics
    • Fallani M, Young D, Scott J, et al. (2010) Intestinal microbiota of 6-week-old infants across Europe: geographic influence beyond delivery mode, breast-feeding and antibiotics. Journal of Pediatric Gastroenterology and Nutrition, 51, 77-84.
    • (2010) Journal of Pediatric Gastroenterology and Nutrition , vol.51 , pp. 77-84
    • Fallani, M.1    Young, D.2    Scott, J.3
  • 15
    • 0034524279 scopus 로고    scopus 로고
    • Modulation of intestinal microflora by specific dietary components
    • DOI 10.1080/089106000750060260
    • Gil A, Reuda R, (2000) Modulation of intestinal microflora by specific dietary components. Microbial Ecology in Health and Diseases, 12, 31-39. (Pubitemid 32056920)
    • (2000) Microbial Ecology in Health and Disease , vol.12 , Issue.SUPPL. 2 , pp. 31-39
    • Gil, A.1    Rueda, R.2
  • 16
    • 40149103278 scopus 로고    scopus 로고
    • Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex
    • DOI 10.1038/nmeth.1184, PII NMETH.1184
    • Hamady MJ, Walker J, Harris JK, et al. (2008) Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex. Nature Methods, 5, 235-237. (Pubitemid 351325646)
    • (2008) Nature Methods , vol.5 , Issue.3 , pp. 235-237
    • Hamady, M.1    Walker, J.J.2    Harris, J.K.3    Gold, N.J.4    Knight, R.5
  • 17
    • 80052054575 scopus 로고    scopus 로고
    • Phylogenetic analysis of the intestinal microbial community in herbivorous land and marine iguanas of the Galapagos Islands using 16S rRNA-based pyrosequencing
    • Hong PY, Wheeler E, Cann IKO, et al. (2011) Phylogenetic analysis of the intestinal microbial community in herbivorous land and marine iguanas of the Galapagos Islands using 16S rRNA-based pyrosequencing. ISME Journal, 5, 1461-1470. doi:.
    • (2011) ISME Journal , vol.5 , pp. 1461-1470
    • Hong, P.Y.1    Wheeler, E.2    Cann, I.K.O.3
  • 18
    • 77954737326 scopus 로고    scopus 로고
    • Functional composition controls invasion success in a California serpentine grassland
    • Hooper DU, Dukes JS, (2010) Functional composition controls invasion success in a California serpentine grassland. Journal of Ecology, 98, 764-777.
    • (2010) Journal of Ecology , vol.98 , pp. 764-777
    • Hooper, D.U.1    Dukes, J.S.2
  • 20
    • 52949115612 scopus 로고    scopus 로고
    • Microbiology: Metagenomics
    • Hugenholtz P, Tyson GW, (2008) Microbiology: metagenomics. Nature, 455, 481-483.
    • (2008) Nature , vol.455 , pp. 481-483
    • Hugenholtz, P.1    Tyson, G.W.2
  • 21
    • 34447324898 scopus 로고    scopus 로고
    • Stability and diversity of ecosystems
    • DOI 10.1126/science.1133258
    • Ives AR, Carpenter SR, (2007) Stability and diversity of ecosystems. Science, 317, 58-62. (Pubitemid 47056443)
    • (2007) Science , vol.317 , Issue.5834 , pp. 58-62
    • Ives, A.R.1    Carpenter, S.R.2
  • 22
    • 0004038882 scopus 로고    scopus 로고
    • 11th edn. University of Calgary Press, Calgary, Alberta, Canada
    • Jackson MH, (2007) Galápagos: A Natural History, 11th edn. University of Calgary Press, Calgary, Alberta, Canada.
    • (2007) Galápagos: A Natural History
    • Jackson, M.H.1
  • 23
    • 84859100977 scopus 로고    scopus 로고
    • Hideous looking creatures
    • Princeton University Press, Princeton, New Jersey
    • Kritcher JC,. (2006) Hideous looking creatures. In: Galapagos: A Natural History, pp. 81-97. Princeton University Press, Princeton, New Jersey.
    • (2006) Galapagos: A Natural History , pp. 81-97
    • Kritcher, J.C.1
  • 24
    • 77957322883 scopus 로고    scopus 로고
    • Bacteria from drinking water supply and their fate in gastrointestinal tracts of germ-free mice: A phylogenetic comparison study
    • Lee J, Lee CS, Hugunin KM, et al. (2010) Bacteria from drinking water supply and their fate in gastrointestinal tracts of germ-free mice: a phylogenetic comparison study. Water Research, 44, 5050-5058.
    • (2010) Water Research , vol.44 , pp. 5050-5058
    • Lee, J.1    Lee, C.S.2    Hugunin, K.M.3
  • 25
    • 0033789938 scopus 로고    scopus 로고
    • Biodiversity, stability, and productivity in competitive communities
    • Lehman CL, Tilman D, (2000) Biodiversity, stability, and productivity in competitive communities. The American Naturalist, 156, 534-552.
    • (2000) The American Naturalist , vol.156 , pp. 534-552
    • Lehman, C.L.1    Tilman, D.2
  • 28
    • 52049092682 scopus 로고    scopus 로고
    • Worlds within worlds: Evolution of the vertebrate gut microbiota
    • Ley RE, Lozupone CA, Hamady M, et al. (2008b) Worlds within worlds: evolution of the vertebrate gut microbiota. Nature, 6, 776-788.
    • (2008) Nature , vol.6 , pp. 776-788
    • Ley, R.E.1    Lozupone, C.A.2    Hamady, M.3
  • 29
    • 60149108989 scopus 로고    scopus 로고
    • Adaptation and diversification on islands
    • Losos JB, Ricklefs RE, (2009) Adaptation and diversification on islands. Nature, 457, 830-836.
    • (2009) Nature , vol.457 , pp. 830-836
    • Losos, J.B.1    Ricklefs, R.E.2
  • 30
    • 0001372773 scopus 로고
    • Fluctuations of animal populations and a measure of community stability
    • MacArthur R, (1955) Fluctuations of animal populations and a measure of community stability. Ecology, 36, 533-536.
    • (1955) Ecology , vol.36 , pp. 533-536
    • MacArthur, R.1
  • 32
    • 0003401433 scopus 로고
    • Harvard University Press, Cambridge, Massachusetts
    • Mayr E, (1963) Animal Species and Evolution. Harvard University Press, Cambridge, Massachusetts.
    • (1963) Animal Species and Evolution
    • Mayr, E.1
  • 33
    • 40349113425 scopus 로고    scopus 로고
    • The macaque gut microbiome in health, lentiviral infection, and chronic enterocolitis
    • doi
    • McKenna P, (2008) The macaque gut microbiome in health, lentiviral infection, and chronic enterocolitis. PLoS Pathogens, 4, e20. doi:.
    • (2008) PLoS Pathogens , vol.4
    • McKenna, P.1
  • 34
    • 0001257473 scopus 로고
    • Diversity and stability of ecological communities: A comment on the role of empiricism in ecology
    • McNaughton SJ, (1977) Diversity and stability of ecological communities: a comment on the role of empiricism in ecology. The American Naturalist, 111, 515-525.
    • (1977) The American Naturalist , vol.111 , pp. 515-525
    • McNaughton, S.J.1
  • 37
    • 70149120519 scopus 로고    scopus 로고
    • Microbial biogeography of six salt lakes in inner Mongolia, China and a salt lake in Argentina
    • Pagaling E, (2009) Microbial biogeography of six salt lakes in inner Mongolia, China and a salt lake in Argentina. Applied and Environmental Microbiology, 75, 5750-5760.
    • (2009) Applied and Environmental Microbiology , vol.75 , pp. 5750-5760
    • Pagaling, E.1
  • 38
    • 36148937913 scopus 로고    scopus 로고
    • A pyrosequencing-tailored nucleotide barcode design unveils opportunities for large-scale sample multiplexing
    • Parameswaran P, (2007) A pyrosequencing-tailored nucleotide barcode design unveils opportunities for large-scale sample multiplexing. Nucleic Acids Research, 35, e130.
    • (2007) Nucleic Acids Research , vol.35
    • Parameswaran, P.1
  • 39
    • 51849127437 scopus 로고    scopus 로고
    • Colonisation and diversification of Galápagos terrestrial fauna: A phylogenetic and biogeographical synthesis
    • Parent CE, Caccone A, Petren K, (2008) Colonisation and diversification of Galápagos terrestrial fauna: a phylogenetic and biogeographical synthesis. Philosophical Transactions of the Royal Society, London B, 363, 3347-3361.
    • (2008) Philosophical Transactions of the Royal Society, London B , vol.363 , pp. 3347-3361
    • Parent, C.E.1    Caccone, A.2    Petren, K.3
  • 40
    • 0021607939 scopus 로고
    • The complexity and stability of ecosystems
    • Pimm SL, (1984) The complexity and stability of ecosystems. Nature, 307, 321-326.
    • (1984) Nature , vol.307 , pp. 321-326
    • Pimm, S.L.1
  • 42
    • 79951480123 scopus 로고    scopus 로고
    • R Development Core Team. R Foundation for Statistical Computing, Vienna, Austria
    • R Development Core Team. (2010) R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing, Vienna, Austria.
    • (2010) R: A Language and Environment for Statistical Computing
  • 44
    • 0031110216 scopus 로고    scopus 로고
    • Evolutionary Age of the Galápagos Iguanas Predates the Age of the Present Galápagos Islands
    • DOI 10.1006/mpev.1996.0386, PII S1055790396903863
    • Rassmann K, (1997) Evolutionary age of the Galápagos iguanas predates the age of the present Galápagos Islands. Molecular Phylogenetics and Evolution, 7, 158-172. (Pubitemid 127345879)
    • (1997) Molecular Phylogenetics and Evolution , vol.7 , Issue.2 , pp. 158-172
    • Rassmann, K.1
  • 45
    • 0030749796 scopus 로고    scopus 로고
    • Hybridization between the Galapagos land and marine iguana (Conolophus subcristatus and Amblyrhynchus cristatus) on Plaza Sur
    • Rassmann K, Trillmich F, Tautz D, (1997) Hybridization between the Galapagos land and marine iguana (Conolophus subcristatus and Amblyrhynchus cristatus) on Plaza Sur. Journal of Zoology, 242, 729-739. (Pubitemid 27350086)
    • (1997) Journal of Zoology , vol.242 , Issue.4 , pp. 729-739
    • Rassmann, K.1    Trillmich, F.2    Tautz, D.3
  • 47
    • 23044514909 scopus 로고    scopus 로고
    • Algal food preferences and seasonal foraging strategy of the marine iguana, Amblyrhynchus cristatus, on Santa Cruz, Galápagos
    • Shepherd SA, Hawkes MW, (2005) Algal food preferences and seasonal foraging strategy of the marine iguana, Amblyrhynchus cristatus, on Santa Cruz, Galápagos. Bulletin of Marine Science, 77, 51-72. (Pubitemid 41060170)
    • (2005) Bulletin of Marine Science , vol.77 , Issue.1 , pp. 51-72
    • Shepherd, S.A.1    Hawkes, M.W.2
  • 48
    • 0029910524 scopus 로고    scopus 로고
    • Character congruence and phylogenetic signal in molecular and morphological data sets: A case study in the living Iguanas (squamata, Iguanidae)
    • Sites JW, Scott KD, Guerra T, et al. (1996) Character congruence and phylogenetic signal in molecular and morphological data sets: a case study of the living iguanas. Molecular Biology and Evolution, 13, 1087-1105. (Pubitemid 26346246)
    • (1996) Molecular Biology and Evolution , vol.13 , Issue.8 , pp. 1087-1105
    • Sites Jr., J.W.1    Davis, S.K.2    Guerra, T.3    Iverson, J.B.4    Snell, H.L.5
  • 49
    • 0021533823 scopus 로고
    • Variation among populations of Galapagos land iguanas (Conolophus): Contrasts of phylogeny and ecology
    • Snell HL, Snell HM, Tracy CR, (1984) Variation among populations of Galapagos land iguanas (Conolophus): contrasts of phylogeny and ecology. Biological Journal of the Linnean Society, 21, 185-208.
    • (1984) Biological Journal of the Linnean Society , vol.21 , pp. 185-208
    • Snell, H.L.1    Snell, H.M.2    Tracy, C.R.3
  • 50
    • 74549196525 scopus 로고    scopus 로고
    • Progressive colonization and restricted gene flow shape island-dependent population structure in Galápagos marine iguana (Amblyrhynchus cristatus)
    • Steinfartz S, Glaberman S, Lanterbecq D, et al. (2009) Progressive colonization and restricted gene flow shape island-dependent population structure in Galápagos marine iguana (Amblyrhynchus cristatus). BMC Evolutionary Biology, 9, 297.
    • (2009) BMC Evolutionary Biology , vol.9 , pp. 297
    • Steinfartz, S.1    Glaberman, S.2    Lanterbecq, D.3
  • 52
    • 0000487913 scopus 로고
    • Behavioral acquisition of the hindgut fermentation system by hatchling Iguana iguana
    • Troyer K, (1983) Behavioral acquisition of the hindgut fermentation system by hatchling Iguana iguana. Behavioral Ecology and Sociobiology, 14, 189-193.
    • (1983) Behavioral Ecology and Sociobiology , vol.14 , pp. 189-193
    • Troyer, K.1
  • 53
    • 56549110028 scopus 로고    scopus 로고
    • Population genetics of Galápagos land iguana (genus Conolophus) remnant populations
    • Tzika AC, Rosa SFP, Fabiani A, et al. (2008) Population genetics of Galápagos land iguana (genus Conolophus) remnant populations. Molecular Ecology, 17, 4943-4952.
    • (2008) Molecular Ecology , vol.17 , pp. 4943-4952
    • Tzika, A.C.1    Rosa, S.F.P.2    Fabiani, A.3
  • 55
    • 54049089063 scopus 로고    scopus 로고
    • Context dependent effects of plant species and functional groups loss on vegetation invisibility across an island area-gradient
    • Wardle DA, Lagerström A, Nilsson MC, (2008) Context dependent effects of plant species and functional groups loss on vegetation invisibility across an island area-gradient. Journal of Ecology, 96, 1174-1186.
    • (2008) Journal of Ecology , vol.96 , pp. 1174-1186
    • Wardle, D.A.1    Lagerström, A.2    Nilsson, M.C.3
  • 56
    • 0042242559 scopus 로고    scopus 로고
    • Geographic barriers isolate endemic populations of hyperthermophilic archaea
    • DOI 10.1126/science.1086909
    • Whitaker RJ, Grogan DW, Taylor JW, (2003) Geographic barriers isolate endemic populations of hyperthermophilic archeae. Science, 301, 976-978. (Pubitemid 36994812)
    • (2003) Science , vol.301 , Issue.5635 , pp. 976-978
    • Whitaker, R.J.1    Grogan, D.W.2    Taylor, J.W.3
  • 57
    • 0027837970 scopus 로고
    • Ontogenetic changes in food intake and digestion rate of the herbivorous marine iguana (Amblyrhynchus cristatus, Bell)
    • Wikelski M, Gall B, Trillmich F, (1993) Ontogenetic changes in food intake and digestion rate of the herbivorous marine iguana (Amblyrhynchus cristatus, Bell). Oecologia, 94, 373-379. (Pubitemid 24408866)
    • (1993) Oecologia , vol.94 , Issue.3 , pp. 373-379
    • Wikelski, M.1    Gall, B.2    Trillmich, F.3
  • 58
    • 0027100116 scopus 로고
    • Complex interactions in metacommunities, with implications for biodiversity and higher levels of selection
    • Wilson DS, (1992) Complex interactions in metacommunities with implications for biodiversity and higher levels of selection. Ecology, 73, 1984-2000. (Pubitemid 23400157)
    • (1992) Ecology , vol.73 , Issue.6 , pp. 1984-2000
    • Wilson, D.S.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.