Identification of amino acid residues essential for onion lachrymatory factor synthase activity

Bioscience, Biotechnology and Biochemistry

Volumn 76, Issue 3, 2012, Pages 447-453

  Masamura, Noriya ^a,b   Ohashi, Wakana ^c   Tsuge, Nobuaki ^a   Imai, Shinsuke ^a   Ishii Nakamura, Anri ^d   Hirota, Hiroshi ^c,d   Nagata, Toshiyuki ^e   Kumagai, Hidehiko ^f  

^a House Foods Corporation   (Japan)

^b TOTTORI UNIVERSITY   (Japan)

^c RIKEN YOKOHAMA INSTITUTE   (Japan)

^d YOKOHAMA CITY UNIVERSITY   (Japan)

^e HOSEI UNIVERSITY   (Japan)

^f ISHIKAWA PREFECTURAL UNIVERSITY   (Japan)

Author keywords

Allium; Homology modeling; Lachrymatory factor; Lachrymatory factor synthase; Thioaldehyde S oxides

Indexed keywords

ALLIUM; HOMOLOGY MODELING; LACHRYMATORY FACTOR; LACHRYMATORY FACTOR SYNTHASE; THIOALDEHYDE S-OXIDES;

CATALYSIS; ENZYMES; SUBSTITUTION REACTIONS;

AMINO ACIDS;

COMPLEMENTARY DNA; ISOMERASE;

ALLIUM; AMINO ACID SEQUENCE; ARTICLE; BIOCATALYSIS; CHEMICAL STRUCTURE; CHEMISTRY; ENZYMOLOGY; GENETICS; METABOLISM; MOLECULAR CLONING; MOLECULAR GENETICS; PROTEIN CONFORMATION; SEQUENCE HOMOLOGY; SITE DIRECTED MUTAGENESIS;

ALLIUM; AMINO ACID SEQUENCE; BIOCATALYSIS; CLONING, MOLECULAR; DNA, COMPLEMENTARY; INTRAMOLECULAR OXIDOREDUCTASES; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; MUTAGENESIS, SITE-DIRECTED; PROTEIN CONFORMATION; SEQUENCE HOMOLOGY, AMINO ACID;

ALLIUM; ALLIUM CEPA;

EID: 84859033885     PISSN: 09168451     EISSN: 13476947     Source Type: Journal    
DOI: 10.1271/bbb.110652     Document Type: Article

References (31)

1. Brodnitz MH and Pascale JV, J. Agric. Food Chem., 19, 269-272 (1971).
2. Block E and Bayer T, J. Am. Chem. Soc., 112, 4584-4585 (1990).
3. Kubec R, Kim S, and Musah RA, Phytochemistry, 63, 37-40 (2003).
4. Kubec R, Cody RB, Dane AJ, Musah RA, Schraml J, Vattekkatte A, and Block E, J. Agric. Food Chem., 58, 1121- 1128 (2010).
5. Block E, Penn RE, and Revelle LK, J. Am. Chem. Soc., 101, 2200-2201 (1979).
6. Block E, Angew. Chem. Int. Ed. Engl., 31, 1135-1178 (1992).
7. Shen C and Parkin KL, J. Agric. Food Chem., 48, 6254-6260 (2000).
8. Yamane A, Yamane A, and Shibamoto T, J. Agric. Food Chem., 42, 1010-1012 (1994).
9. Imai S, Tsuge N, Tomotake M, Nagatome Y, Sawada H, Nagata T, and Kumagai H, Nature, 419, 685 (2002).
10. Imai S, Masamura N, Tsuge N, Tomotake M, Sawada H, Nagata T, and Kumagai H, J. Clin. Biochem. Nutr., 43 (Suppl. 1), 211-214 (2008).
11. Musah RA, He Q, and Kubec R, Plant Physiol., 151, 1294-1303 (2009).
12. Block E, Gillies JZ, Gillies CW, Bazzi AA, Putman D, Revelle LK, Wang D, and Zhang X, J. Am. Chem. Soc., 118, 7492-7501 (1996).
13. Nock LP and Mazelis M, Phytochemistry, 28, 729-731 (1989).
14. Bradford M, Anal. Biochem., 72, 248-254 (1976).
15. Kamoi T, Eady CC, and Imai S, Plant Biotechnol. Rep., 2, 199-206 (2008).
16. Eady CC, Kamoi T, Kato M, Porter NG, Davis S, Shaw M, Kamoi A, and Imai S, Plant Physiol., 147, 2096-2106 (2008).
17. Jones DT, J. Mol. Biol., 292, 195-202 (1999).
18. Bryson K, McGuffin LJ, Marsden RL, Ward JJ, Sodhi JS, and Jones DT, Nucleic Acids Res., 33, (Web Server issue): W36-W38 (2005).
19. Arnold K, Bordoli L, Kopp J, and Schwede T, Bioinformatics, 22, 195-201 (2006).
20. Schwede T, Kopp J, Guex N, and Peitsch MC, Nucleic Acids Res., 31, 3381-3385 (2003).
21. Guex N and Peitsch MC, Electrophoresis, 18, 2714-2723 (1997).
22. van der Meer QP and Hanelt P, "Onion and Allied Crops Volume III Biochemistry, Food Science, and Minor Crops," eds. Brewster JL and Rabinowitch HD, CRC Press, Inc., Boca Raton, pp. 179-196 (1990).
23. Gutteridge A and Thornton JM, Trends Biochem. Sci., 30, 622-629 (2005).
24. Yin P, Fan H, Hao Q, Yuan X, Wu D, Pang Y, Yan C, Li W, Wang J, and Yan N, Nat. Struct. Mol. Biol., 16, 1230-1236 (2009).
25. Klingler J, Batelli G, and Zhu JK, J. Exp. Bot., 61, 3199-3210 (2010).
26. Robben J, van der Schueren J, and Volckaert G, J. Biological. Chem., 268, 24555-24558 (1993).
27. Melcher K, Ng LM, Zhou XE, Fen-Fen Soon FF, Yong Xu Y, Kelly M, Suino-Powel KM, Park SY, Weiner JJ, Fujii H, Viswanathan Chinnusamy V, Kovach A, Li J, Wang Y, Li J, Peterson FC, Jensen DR, Yong EL, Volkman BF, Cutler SR, Zhu JK, and Xu HE, Nature, 462, 602-610 (2009).
28. Miyazono K, Miyakawa T, Sawano Y, Kubota K, Kang HJ, Asano A, Miyauchi Y, Takahashi M, Zhi Y, Fujita Y, Yoshida T, Kodaira K, Yamaguchi-Shinozaki K, and Tanokura M, Nature, 462, 609-615 (2009).
29. Nishimura N, Hitomi K, Arvai AS, Rambo RP, Hitomi C, Cutler SR, Schroeder JI, and Getzoff ED, Science, 326, 1373-1379 (2009).
30. Liu JJ and Ekaramoddoullah AKM, Physiol. Mol. Plant Pathol., 68, 3-13 (2006).
31. Radauer C, Lackner P, and Breiteneder H, BMC Evol. Biol., 8, 286 (2008).