gurken and the I factor retrotransposon RNAs share common localization signals and machinery

Developmental Cell

Volumn 9, Issue 1, 2005, Pages 51-62

  Van De Bor, Véronique ^a   Hartswood, Eve ^b   Jones, Cheryl ^b   Finnegan, David ^b   Davis, Ilan ^a  

^a UNIVERSITY OF EDINBURGH   (United Kingdom)

^b UNIVERSITY OF EDINBURGH   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

DYNEIN ADENOSINE TRIPHOSPHATASE; G PROTEIN COUPLED RECEPTOR KINASE; MESSENGER RNA; RNA; TRANSFORMING GROWTH FACTOR ALPHA;

ANIMAL CELL; ANIMAL TISSUE; ARTICLE; CELL NUCLEUS; CELL TRANSPORT; DNA TRANSPOSITION; DROSOPHILA; FEMALE; FEMALE STERILITY; NONHUMAN; OOCYTE; PRIORITY JOURNAL; PROTEIN LOCALIZATION; PROTEIN SECONDARY STRUCTURE; RETROPOSON; RNA TRANSPORT; SIGNAL TRANSDUCTION;

ANIMALS; BASE SEQUENCE; CELL NUCLEUS; DROSOPHILA; DROSOPHILA PROTEINS; DYNEIN ATPASE; FEMALE; HOMEODOMAIN PROTEINS; MOLECULAR SEQUENCE DATA; NUCLEIC ACID CONFORMATION; OOCYTES; OOGENESIS; RETROELEMENTS; RNA; RNA TRANSPORT; RNA, MESSENGER; SEQUENCE HOMOLOGY, NUCLEIC ACID; TRANS-ACTIVATORS; TRANSFORMING GROWTH FACTOR ALPHA;

EID: 21344451867     PISSN: 15345807     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.devcel.2005.04.012     Document Type: Article

References (45)

1. P. Abad C. Vaury A. Pelisson M.-C. Chaboissier I. Busseau A. Bucheton A long interspersed repetitive element - the I factor of Drosophila teissieri - is able to transpose in different Drosophila species Proc. Natl. Acad. Sci. USA 86 1989 8887-8891
2. C.M. Bergman B.D. Pfeiffer D.E. Rincon-Limas R.A. Hoskins A. Gnirke C.J. Mungall A.M. Wang B. Kronmiller J. Pacleb S. Park et al. Assessing the impact of comparative genomic sequence data on the functional annotation of the Drosophila genome Genome Biol. 3 2002 86
3. A. Bucheton I transposable elements and I-R hybrid dysgenesis in Drosophila Trends Genet. 6 1990 16-21
4. S.L. Bullock D. Ish-Horowicz Conserved signals and machinery for RNA transport in Drosophila oogenesis and embryogenesis Nature 414 2001 611-616
5. S.L. Bullock D. Zicha D. Ish-Horowicz The Drosophila hairy RNA localization signal modulates the kinetics of cytoplasmic mRNA transport EMBO J. 22 2003 2484-2494
6. B. Cha B.S. Koppetsch W.E. Theurkauf In vivo analysis of Drosophila bicoid mRNA localization reveals a novel microtubule-dependent axis specification pathway Cell 106 2001 35-46
7. G.J. Cost Q. Feng A. Jacquier J.D. Boeke Human L1 element target-primed reverse transcription in vitro EMBO J. 21 2002 5899-5910
8. I. Davis Visualising fluorescence in Drosophila - optimal detection in thick specimens In Protein Localisation by Fluorescence Microscopy: A Practical Approach V.J. Allan ed. 2000 Oxford University Press Oxford 131-162
9. I. Davis D. Ish-Horowicz Apical localization of pair-rule transcripts requires 3′ sequences and limits protein diffusion in the Drosophila blastoderm embryo Cell 67 1991 927-940
10. I. Davis C.H. Girdham P.H. O'Farrell A nuclear GFP that marks nuclei in living Drosophila embryos - maternal supply overcomes a delay in the appearance of zygotic fluorescence Dev. Biol. 170 1995 726-729
11. A. Dawson E. Hartswood T. Paterson D.J. Finnegan A LINE-like transposable element in Drosophila, the I factor, encodes a protein with properties similar to those of retroviral nucleocapsids EMBO J. 16 1997 4448-4455
12. W. Driever C. Nüsslein-Volhard A gradient of bicoid protein in Drosophila embryos Cell 54 1988 83-93
13. J.E. Duncan R. Warrior The cytoplasmic Dynein and Kinesin motors have interdependent roles in patterning the Drosophila oocyte Curr. Biol. 12 2002 1982-1991
14. D.H. Fawcett C.K. Lister E. Kellett D.J. Finnegan Transposable elements controlling I-R hybrid dysgenesis in D. melanogaster are similar to mammalian LINEs Cell 47 1986 1007-1015
15. D.J. Finnegan The I factor and I-R hybrid dysgenesis in Drosophila melanogaster In Mobile DNA D.E. Berg M.M. Howe eds. 1989 (American Society for Microbiology Washington, DC) 503-517
16. H. Francis-Lang I. Davis D. Ish-Horowicz Asymmetric localization of Drosophila pair-rule rranscripts from displaced nuclei-evidence for directional nuclear export EMBO J. 15 1996 640-649
17. E.R. Gavis L. Lunsford S.E. Bergsten R. Lehmann A conserved 90-nucleotide element mediates translational repression of nanos RNA Development 122 1996 2791-2800
18. A. Gonzalez-Reyes H. Elliott D. St Johnston Polarization of both major body axes in Drosophila by Gurken-Torpedo signaling Nature 375 1995 654-658
19. O. Hachet A. Ephrussi Splicing of oskar RNA in the nucleus is coupled to its cytoplasmic localization Nature 428 2004 959-963
20. J. Januschke L. Gervais S. Dass J.A. Kaltschmidt H. Lopez-Schier D.S. St Johnston A.H. Brand S. Roth A. Guichet Polar transport in the Drosophila oocyte requires Dynein and Kinesin I cooperation Curr. Biol. 12 2002 1971-1981
21. J. Kim-Ha P.J. Webster J.L. Smith P.M. Macdonald Multiple RNA regulatory elements mediate distinct steps in localization of oskar mRNA Development 119 1993 169-178
22. E.S. Lander L.M. Linton B. Birren C. Nusbaum M.C. Zody J. Baldwin K. Devon K. Dewar M. Doyle W. FitzHugh et al. Initial sequencing and analysis of the human genome Nature 409 2001 860-921
23. J.-M. Lavige P. Lecher Mitoses anormales dans les embryons à développement bloqué dans le système I-R dysgénésie hybride chez Drosophila melanogaster Biol. Cell. 44 1982 9-14
24. D.D. Luan M.H. Korman J.L. Jakubczak T.H. Eickbush Reverse transcription of R2Bm RNA is primed by a nick at the chromosomal target site: A mechanism for non-LTR retrotransposition Cell 72 1993 595-605
25. P.M. Macdonald G. Struhl cis-acting sequences responsible for anterior localization of bicoid mRNA in Drosophila embryos Nature 336 1988 595-598
26. P.M. Macdonald K. Kerr J.L. Smith A. Leask RNA regulatory element BLE1 directs the early steps of bicoid mRNA localization Development 118 1993 1233-1243
27. N. MacDougall A. Clark E. MacDougall I. Davis Drosophila gurken (TGFalpha) mRNA localizes as particles that move within the oocyte in two dynein-dependent steps Dev. Cell 4 2003 307-319
28. F.S. Neuman-Silberberg T. Schüpbach The Drosophila dorsoventral patterning gene gurken produces a dorsally localized RNA and encodes a TGF alpha-like protein Cell 75 1993 165-174
29. F.S. Neuman-Silberberg T. Schüpbach Dorsoventral axis formation in Drosophila depends on the correct dosage of the gene gurken Development 120 1994 2457-2463
30. C.N. Nusslein-Volhard The bicoid morphogen papers (I): Account from CNV Cell 116 2004 S1-S5
31. G. Picard J.-M. Lavige A. Bucheton J.-M. Bregliano Non Mendelian female sterility in Drosophila melanogaster: Physiological pattern of embryo lethality Biol. Cell. 29 1977 89-98
32. M.A. Pritchard J.M. Dura A. Pelisson A. Bucheton D.J. Finnegan A cloned I-factor is fully functional in Drosophila melanogaster Mol. Gen. Genet. 214 1988 533-540
33. S. Roth T. Schupbach The relationship between ovarian and embryonic dorsoventral patterning in Drosophila Development 120 1994 2245-2257
34. C. Saunders R.S. Cohen The role of oocyte transcription, the 5′UTR, and translation repression and derepression in Drosophila gurken mRNA and protein localization Mol. Cell 3 1999 43-54
35. M. Seleme I. Busseau S. Malinsky A. Bucheton D. Teninges High-frequency retrotransposition of a marked I factor in Drosophila melanogaster correlates with a dynamic expression pattern of the ORF1 protein in the cytoplasm of oocytes Genetics 151 1999 761-771
36. C. Seleme Mdel O. Disson S. Robin C. Brun D. Teninges A. Bucheton In vivo RNA localization of I factor, a non-LTR retrotransposon, requires a cis-acting signal in ORF2 and ORF1 protein Nucleic Acids Res. 33 2005 776-785
37. T.L. Serano R.S. Cohen A small predicted stem-loop structure mediates oocyte localization of Drosophila K10 mRNA Development 121 1995 3809-3818
38. A.J. Simmonds G. dosSantos I. Livne-Bar H.M. Krause Apical localization of wingless transcripts is required for Wingless signaling Cell 105 2001 197-207
39. H. Tekotte I. Davis Intracellular mRNA localization: Motors move messages Trends Genet. 18 2002 636-642
40. G.L. Thio R.P. Ray G. Barcelo T. Schupbach Localization of gurken RNA in Drosophila oogenesis requires elements in the 5′ and 3′ regions of the transcript Dev. Biol. 221 2000 435-446
41. V. Van de Bor I. Davis mRNA localisation gets more complex Curr. Opin. Cell Biol. 16 2004 300-307
42. G.R. Whittaker M. Kann A. Helenius Viral entry into the nucleus Annu. Rev. Cell Dev. Biol. 16 2000 627-651
43. G.S. Wilkie I. Davis Drosophila wingless and pair-rule transcripts localize apically by dynein-mediated transport of RNA particles Cell 105 2001 209-219
44. G.S. Wilkie A.W. Shermoen P.H. O'Farrell I. Davis Transcribed genes are localized according to chromosomal position within polarized Drosophila embryonic nuclei Curr. Biol. 9 1999 1263-1266
45. M. Zuker Mfold web server for nucleic acid folding and hybridization prediction Nucleic Acids Res. 31 2003 3406-3415