A relationship between carotenoid accumulation and the distribution of species of the fungus neurospora in spain

PLoS ONE

Volumn 7, Issue 3, 2012, Pages

  Luque, Eva M ^a   Gutiérrez, Gabriel ^a   Navarro Sampedro, Laura ^a   Olmedo, María ^a   Rodríguez Romero, Julio ^a   Ruger Herreros, Carmen ^a   Tagua, Víctor G ^a   Corrochano, Luis M ^a  

^a UNIVERSITY OF SEVILLE   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

CAROTENOID; NEUROSPORAXANTHIN; UNCLASSIFIED DRUG; FUNGAL DNA; FUNGAL RNA; MESSENGER RNA; PIGMENT;

AL 1 GENE; AL 2 GENE; ARTICLE; BIOACCUMULATION; GENE; GENE EXPRESSION; GEOGRAPHIC DISTRIBUTION; LATITUDE; LIGHT EXPOSURE; NEUROSPORA; NEUROSPORA CRASSA; NEUROSPORA DISCRETA; NEUROSPORA SITOPHILA; NEUROSPORA TETRASPERMA; NONHUMAN; NUCLEOTIDE SEQUENCE; RADIATION PROTECTION; SPAIN; SPECIES DISTRIBUTION; STRAIN DIFFERENCE; ULTRAVIOLET RADIATION; UNINDEXED SEQUENCE; CLASSIFICATION; FUNGAL GENE; GENETICS; GEOGRAPHY; METABOLISM; PHYLOGENY; RADIATION DOSE; RADIATION EXPOSURE; REAL TIME POLYMERASE CHAIN REACTION;

CACERES; FUNGI; NEUROSPORA; NEUROSPORA CRASSA; NEUROSPORA DISCRETA; NEUROSPORA SITOPHILA; NEUROSPORA TETRASPERMA;

CAROTENOIDS; DNA, FUNGAL; GENES, FUNGAL; GEOGRAPHY; NEUROSPORA; PHYLOGENY; PIGMENTS, BIOLOGICAL; RADIATION TOLERANCE; REAL-TIME POLYMERASE CHAIN REACTION; RNA, FUNGAL; RNA, MESSENGER; SPAIN; ULTRAVIOLET RAYS;

EID: 84858652109     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0033658     Document Type: Article

References (57)

1. Davis RH, Perkins DD, (2002) Neurospora: a model of model microbes. Nat Rev Genet 3: 397-403.
2. Perkins DD, Davis RH, (2000) Neurospora at the millennium. Fungal Genet Biol 31: 153-167.
3. Davis RH, (2000) Neurospora. Contributions of a Model Organism Oxford Oxford University Press.
4. Selker EU, (2011) Neurospora. Curr Biol 21: R139-140.
5. Perkins DD, Turner BC, (1988) Neurospora from natural populations: toward the population biology of a haploid eukaryote. Exp Mycol 12: 91-131.
6. Turner BC, Perkins DD, Fairfield A, (2001) Neurospora from natural populations: a global study. Fungal Genet Biol 32: 67-92.
7. Ellison CE, Hall C, Kowbel D, Welch J, Brem RB, et al. (2011) Population genomics and local adaptation in wild isolates of a model microbial eukaryote. Proc Natl Acad Sci USA 108: 2831-2836.
8. Jacobson DJ, Powell AJ, Dettman JR, Saenz GS, Barton MM, et al. (2004) Neurospora in temperate forests of western North America. Mycologia 96: 66-74.
9. Jacobson DJ, Dettman JR, Adams RI, Boesl C, Sultana S, et al. (2006) New findings of Neurospora in Europe and comparisons of diversity in temperate climates on continental scales. Mycologia 98: 550-559.
10. Zalokar M, (1954) Studies on biosynthesis of carotenoids in Neurospora crassa. Arch Biochem Biophys 50: 71-80.
11. Zalokar M, (1955) Biosynthesis of carotenoids in Neurospora. Action spectrum of photoactivation. Arch Biochem Biophys 56: 318-325.
12. Chen CH, Dunlap JC, Loros JJ, (2010) Neurospora illuminates fungal photoreception. Fungal Genet Biol 47: 922-929.
13. Linden H, Ballario P, Macino G, (1997) Blue light regulation in Neurospora crassa. Fungal Genet Biol 22: 141-150.
14. Brunner M, Káldi K, (2008) Interlocked feedback loops of the circadian clock of Neurospora crassa. Mol Microbiol 68: 255-262.
15. Diernfellner AC, Schafmeier T, (2011) Phosphorylations: Making the Neurospora crassa circadian clock tick. FEBS Lett 585: 1461-1466.
16. Schafmeier T, Diernfellner AC, (2011) Light input and processing in the circadian clock of Neurospora. FEBS Lett 585: 1467-1473.
17. Namitha KK, Negi PS, (2010) Chemistry and biotechnology of carotenoids. Crit Rev Food Sci Nutr 50: 728-760.
18. Demmig-Adams B, Adams WW 3rd, (2002) Antioxidants in photosynthesis and human nutrition. Science 298: 2149-2153.
19. Britton G, (1995) Structure and properties of carotenoids in relation to function. FASEB J 9: 1551-1558.
20. Sies H, Stahl W, (2004) Carotenoids and UV protection. Photochem Photobiol Sci 3: 749-752.
21. Moliné M, Libkind D, Diéguez MC, van Broock M, (2009) Photoprotective role of carotenoids in yeasts: Response to UV-B of pigmented and naturally-occurring albino strains. J Photochem Photobiol B 95: 156-161.
22. Geis PA, Szaniszlo PJ, (1984) Carotenoid pigments of the dematiaceous fungus Wangiella dermatitidis. Mycologia 76: 268-273.
23. Moliné M, Flores MR, Libkind D, Diéguez MC, Farías ME, et al. (2010) Photoprotection by carotenoid pigments in the yeast Rhodotorula mucilaginosa: the role of torularhodin. Photochem Photobiol Sci 9: 1145-1151.
24. Martín-Rojas V, Gómez-Puerto A, Cerdá-Olmedo E, (1996) Lack of protection by carotenes against gamma-radiation damage in Phycomyces. Radiat Environ Biophys 35: 193-197.
25. Lamare MD, Hoffman J, (2004) Natural variation of carotenoids in the eggs and gonads of the echinoid genus, Strongylocentrotus: implications for their role in ultraviolet radiation photoprotection. J Exp Mar Biol Ecol 312: 215-233.
26. Mathews-Roth MM, Krinsky NI, (1985) Carotenoid dose level and protection against UV-B induced skin tumors. Photochem Photobiol 42: 35-38.
27. Albrecht M, Steiger S, Sandmann G, (2001) Expression of a ketolase gene mediates the synthesis of canthaxanthin in Synechococcus leading to tolerance against photoinhibition, pigment degradation and UV-B sensitivity of photosynthesis. Photochem Photobiol 73: 551-555.
28. Gotz T, Windhovel U, Boger P, Sandmann G, (1999) Protection of photosynthesis against ultraviolet-B radiation by carotenoids in transformants of the cyanobacterium Synechococcus PCC7942. Plant Physiology 120: 599-604.
29. Corrochano LM, Avalos J, (2010) Light sensing. In: Borkovich KA, Ebbole DJ, editors. Cellular and molecular biology of filamentous fungi Washington ASM Press pp. 417-441.
30. Häder DP, Lebert M, Schuster M, del Ciampo L, Helbling EW, et al. (2007) ELDONET-a decade of monitoring solar radiation on five continents. Photochem Photobiol 83: 1348-1357.
31. Lebert M, Schuster M, Häder DP, (2002) The European Light Dosimeter Network: four years of measurements. J Photochem Photobiol B 66: 81-87.
32. Dettman JR, Jacobson DJ, Taylor JW, (2003) A multilocus genealogical approach to phylogenetic species recognition in the model eukaryote Neurospora. Evolution 57: 2703-2720.
33. Menkis A, Bastiaans E, Jacobson DJ, Johannesson H, (2009) Phylogenetic and biological species diversity within the Neurospora tetrasperma complex. J Evol Biol 22: 1923-1936.
34. Dettman JR, Jacobson DJ, Taylor JW, (2006) Multilocus sequence data reveal extensive phylogenetic species diversity within the Neurospora discreta complex. Mycologia 98: 436-446.
35. Villalta CF, Jacobson DJ, Taylor JW, (2009) Three new phylogenetic and biological Neurospora species: N. hispaniola, N. metzenbergii and N. perkinsii. Mycologia 101: 777-789.
36. Dettman JR, Jacobson DJ, Turner E, Pringle A, Taylor JW, (2003) Reproductive isolation and phylogenetic divergence in Neurospora: comparing methods of species recognition in a model eukaryote. Evolution 57: 2721-2741.
37. Nygren K, Strandberg R, Wallberg A, Nabholz B, Gustafsson T, et al. (2011) A comprehensive phylogeny of Neurospora reveals a link between reproductive mode and molecular evolution in fungi. Mol Phylogenet Evol 59: 649-663.
38. Powell AJ, Jacobson DJ, Salter L, Natvig DO, (2003) Variation among natural isolates of Neurospora on small spatial scales. Mycologia 95: 809-819.
39. Schmidhauser TJ, Lauter FR, Russo VE, Yanofsky C, (1990) Cloning, sequence, and photoregulation of al-1, a carotenoid biosynthetic gene of Neurospora crassa. Mol Cell Biol 10: 5064-5070.
40. Arrach N, Schmidhauser TJ, Avalos J, (2002) Mutants of the carotene cyclase domain of al-2 from Neurospora crassa. Mol Genet Genomics 266: 914-921.
41. Schmidhauser TJ, Lauter FR, Schumacher M, Zhou W, Russo VEA, et al. (1994) Characterization of al-2, the phytoene synthase gene of Neurospora crassa. Cloning, sequence analysis, and photoregulation. J Biol Chem 269: 12060-12066.
42. Cadet J, Sage E, Douki T, (2005) Ultraviolet radiation-mediated damage to cellular DNA. Mutat Res 571: 3-17.
43. Sinha RP, Häder DP, (2002) UV-induced DNA damage and repair: a review. Photochem Photobiol Sci 1: 225-236.
44. Berrocal-Tito G, Sametz-Baron L, Eichenberg K, Horwitz BA, Herrera-Estrella A, (1999) Rapid blue light regulation of a Trichoderma harzianum photolyase gene. J Biol Chem 274: 14288-14294.
45. Alejandre-Durán E, Roldán-Arjona T, Ariza RR, Ruiz-Rubio M, (2003) The photolyase gene from the plant pathogen Fusarium oxysporum f. sp. lycopersici is induced by visible light and alpha-tomatine from tomato plant. Fungal Genet Biol 40: 159-165.
46. Bejarano ER, Avalos J, Lipson ED, Cerdá-Olmedo E, (1990) Photoinduced accumulation of carotene in Phycomyces. Planta 183: 1-9.
47. Avalos J, Schrott EL, (1990) Photoinduction of carotenoid biosynthesis in Gibberella fujikuroi. FEMS Microbiol lett 66: 295-298.
48. Li C, Sachs MS, Schmidhauser TJ, (1997) Developmental and photoregulation of three Neurospora crassa carotenogenic genes during conidiation induced by desiccation. Fungal Genet Biol 21: 101-108.
49. Arpaia G, Carattoli A, Macino G, (1995) Light and development regulate the expression of the albino-3 gene in Neurospora crassa. Dev Biol 170: 626-635.
50. Fernandes EK, Rangel DE, Moraes AM, Bittencourt VR, Roberts DW, (2007) Variability in tolerance to UV-B radiation among Beauveria spp. isolates. J Invertebr Pathol 96: 237-243.
51. Braga GU, Flint SD, Miller CD, Anderson AJ, Roberts DW, (2001) Variability in response to UV-B among species and strains of Metarhizium isolated from sites at latitudes from 61 degrees N to 54 degrees S. J Invertebr Pathol 78: 98-108.
52. Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, et al. (2007) Clustal W and Clustal X version 2.0. Bioinformatics 23: 2947-2948.
53. Tamura K, Dudley J, Nei M, Kumar S, (2007) MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol 24: 1596-1599.
54. Posada D, (2008) jModelTest: phylogenetic model averaging. Mol Biol Evol 25: 1253-1256.
55. Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, et al. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25: 3389-3402.
56. Page RDM, (1993) COMPONENT: Tree comparison software for Microsoft Windows, version 2.0. The Natural History Museum, London.
57. Edgar RC, (2010) Search and clustering orders of magnitude faster than BLAST. Bioinformatics 26: 2460-2461.