Emergence of the sudden oak death pathogen Phytophthora ramorum

Trends in Microbiology

Volumn 20, Issue 3, 2012, Pages 131-138

  Grünwald, Niklaus J ^a   Garbelotto, Matteo ^b   Goss, Erica M ^c   Heungens, Kurt ^d   Prospero, Simone ^e  

^a HORTICULTURAL CROPS RESEARCH LABORATORY   (United States)

^b UNIVERSITY OF CALIFORNIA   (United States)

^c UNIVERSITY OF FLORIDA   (United States)

^d INSTITUTE FOR AGRICULTURAL AND FISHERIES RESEARCH ILVO   (Belgium)

^e SWISS FEDERAL RESEARCH INSTITUTE WSL   (Switzerland)

Author keywords

[No Author keywords available]

Indexed keywords

CHRONOBIOLOGY; ENVIRONMENTAL IMPACT; EUROPE; EXOTIC SPECIES; GEOGRAPHIC DISTRIBUTION; GEOGRAPHIC ORIGIN; HOST PATHOGEN INTERACTION; MOLECULAR EVOLUTION; NONHUMAN; NORTH AMERICA; OAK; PHYTOPHTHORA; PHYTOPHTHORA RAMORUM; PLANT FUNGUS INTERACTION; PLANT GENETICS; POPULATION GENETIC STRUCTURE; PRIORITY JOURNAL; REVIEW; UNITED STATES;

EUROPE; EVOLUTION, MOLECULAR; NORTH AMERICA; PHYTOPHTHORA; PLANT DISEASES; QUERCUS;

PHYTOPHTHORA RAMORUM;

EID: 84857993467     PISSN: 0966842X     EISSN: 18784380     Source Type: Journal    
DOI: 10.1016/j.tim.2011.12.006     Document Type: Review

References (71)

1. Grünwald N.J., et al. Phytophthora ramorum: a pathogen with a remarkably wide host-range causing sudden oak death on oaks and ramorum blight on woody ornamentals. Mol. Plant Pathol. 2008, 9:729-740.
2. Rizzo D.M., et al. Phytophthora ramorum as the cause of extensive mortality of Quercus spp. and Lithocarpus densiflorus in California. Plant Dis. 2002, 86:205-214.
3. Werres S., et al. Phytophthora ramorum sp. nov. a new pathogen on Rhododendron and Viburnum. Mycol. Res. 2001, 105:1155-1165.
4. Grünwald N.J., Goss E.M. Evolution and population genetics of exotic and re-emerging pathogens: Novel tools and approaches. Ann. Rev. Phytopathol. 2011, 49:249-267.
5. Baldauf S.L. The deep roots of eukaryotes. Science 2003, 300:1703-1706.
6. Davidson J.M., et al. Transmission of Phytophthora ramorum in mixed-evergreen forest in California. Phytopathology 2005, 95:587-596.
7. Tooley P.W., et al. Recovery of Phytophthora ramorum following exposure to temperature extremes. Plant Dis. 2008, 92:431-437.
8. Blair J.E., et al. A multi-locus phylogeny for Phytophthora utilizing markers derived from complete genome sequences. Fungal Genet. Biol. 2008, 45:266-277.
9. Hansen E.M., et al. Susceptibility of Oregon forest trees and shrubs to Phytophthora ramorum: A comparison of artificial inoculation and natural infection. Plant Dis. 2005, 89:63-70.
10. Rizzo D.M., et al. Phytophthora ramorum: Integrative research and management of an emerging pathogen in California and Oregon forests. Ann. Rev. Phytopathol. 2005, 43:309-335.
11. Parke J.L., et al. Phytophthora ramorum colonizes tanoak xylem and is associated with reduced stem water transport. Phytopathology 2007, 97:1558-1567.
12. Collins B.R., et al. The effects of Phytophthora ramorum infection on hydraulic conductivity and tylosis formation in tanoak sapwood. Can. J. Forest Res. 2009, 39:1766-1776.
13. Rizzo D.M., Garbelotto M. Sudden oak death: endangering California and Oregon forest ecosystems. Front. Ecol. Environ. 2003, 1:197-204.
14. Brasier C., Webber J. Plant pathology: sudden larch death. Nature 2010, 466:824-825.
15. Vercauteren A., et al. Clonal expansion of the Belgian Phytophthora ramorum populations based on new microsatellite markers. Mol. Ecol. 2010, 19:92-107.
16. Ivors K., et al. Microsatellite markers identify three lineages of Phytophthora ramorum in US nurseries, yet single lineages in US forest and European nursery populations. Mol. Ecol. 2006, 15:1493-1505.
17. Goss E.M., et al. Population genetic analysis infers migration pathways of Phytophthora ramorum in US nurseries. PLoS Pathog. 2009, 5:e1000583.
18. Grünwald N.J., et al. Standardizing the nomenclature for clonal lineages of the sudden oak death pathogen, Phytophthora ramorum. Phytopathology 2009, 99:792-795.
19. Mascheretti S., et al. Genetic epidemiology of the sudden oak death pathogen Phytophthora ramorum in California. Mol. Ecol. 2009, 18:4577-4590.
20. Mascheretti S., et al. Reconstruction of the Sudden Oak Death epidemic in California through microsatellite analysis of the pathogen Phytophthora ramorum. Mol. Ecol. 2008, 17:2755-2768.
21. Meentemeyer R., et al. Mapping the risk of establishment and spread of sudden oak death in California. Forest Ecol. Manag. 2004, 200:195-214.
22. Prospero S., et al. Population dynamics of the sudden oak death pathogen Phytophthora ramorum in Oregon from 2001 to 2004. Mol. Ecol. 2007, 16:2958-2973.
23. Goss E.M., et al. Phytophthora ramorum in Canada: Evidence for migration within North America and from Europe. Phytopathology 2011, 101:166-171.
24. Prospero S., et al. Migration patterns of the emerging plant pathogen Phytophthora ramorum on the west coast of the United States of America. Phytopathology 2009, 99:739-749.
25. Beerli P., Felsenstein J. Maximum likelihood estimation of a migration matrix and effective population sizes in n subpopulations by using a coalescent approach. Proc. Natl. Acad. Sci. U.S.A. 2001, 98:4563-4568.
26. Tooley P.W., et al. Effect of temperature and moisture period on infection of Rhododendron 'Cunningham's White' by Phytophthora ramorum. Phytopathology 2009, 99:1045-1052.
27. Werres S., et al. Survival of Phytophthora ramorum in recirculating irrigation water and subsequent infection of Rhododendron and Viburnum. Plant Dis. 2007, 91:1034-1044.
28. Shishkoff N. Persistence of Phytophthora ramorum in soil mix and roots of nursery ornamentals. Plant Dis. 2007, 91:1245-1249.
29. Parke J.L., Lewis C. Root and stem infection of Rhododendron from potting medium infested with Phytophthora ramorum. Plant Dis. 2007, 91:1265-1270.
30. Denman S., et al. Phytophthora ramorum and Phytophthora kernoviae on naturally infected asymptomatic foliage. EPPO Bull. 2009, 39:105-111.
31. Moslonka-Lefebvre M., et al. Networks in plant epidemiology: from genes to landscapes, countries, and continents. Phytopathology 2011, 101:392-403.
32. Goss E.M., et al. Ancient isolation and independent evolution of the three clonal lineages of the exotic sudden oak death pathogen Phytophthora ramorum. Mol. Ecol. 2009, 18:1161-1174.
33. Tyler B.M., et al. Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis. Science 2006, 313:1261-1266.
34. Grünwald N.J., et al. Population structure of Phytophthora infestans in the Toluca Valley region of Central Mexico. Phytopathology 2001, 91:882-890.
35. Grünwald N.J., Flier W.G. The biology of Phytophthora infestans at its center of origin. Ann. Rev. Phytopathol. 2005, 43:171-190.
36. Flier W.G., et al. Phytophthora ipomoeae, a new homothallic species causing late blight on Ipomoeae longipedunculata in the Toluca Valley of central Mexico. Mycol. Res. 2002, 106:848-856.
37. Brasier C., Kirk S. Production of gametangia by Phytophthora ramorum in vitro. Mycol. Res. 2004, 108:823-827.
38. Vercauteren A., et al. Aberrant genome size and instability of Phytophthora ramorum oospore progenies. Fungal Genet. Biol. 2011, 48:537-543.
39. Boutet X., et al. Oospores progenies from Phytophthora ramorum. Fungal Biol. 2010, 114:369-378.
40. Werres S., Kaminsky K. Characterization of European and North American Phytophthora ramorum isolates due to their morphology and mating behaviour in vitro with heterothallic Phytophthora species. Mycol. Res. 2005, 109:860-871.
41. Vercauteren A., et al. Genotypic and phenotypic characterization of the European A2 isolates of Phytophthora ramorum. Eur. J. Plant Pathol. 2011, 129:621-635.
42. Dobrowolski M.P., et al. Non-mendelian inheritance revealed in a genetic analysis of sexual progeny of Phytophthora cinnamomi with microsatellite markers. Fungal Genet. Biol. 2002, 35:197-212.
43. Hardham A.R. Phytophthora cinnamomi. Mol. Plant Pathol. 2005, 6:589-604.
44. Fry W.E. Phytophthora infestans: the plant (and R gene) destroyer. Mol. Plant Pathol. 2008, 9:385-402.
45. Duran A., et al. Phytophthora pinifolia sp nov associated with a serious needle disease of Pinus radiata in Chile. Plant Pathol. 2008, 57:715-727.
46. Hansen E.M., et al. Managing Port-Orford-Cedar and the introduced pathogen Phytophthora lateralis. Plant Dis. 2000, 84:4-10.
47. Brasier C.M., et al. Phytophthora alni sp. nov. and its variants: designation of emerging heteroploid hybrid pathogens spreading on Alnus trees. Mycol. Res. 2004, 108:1172-1184.
48. Ioos R., et al. Genetic characterization of the natural hybrid species Phytophthora alni as inferred from nuclear and mitochondrial DNA analyses. Fungal Genet. Biol. 2006, 43:511-529.
49. Goss E.M., et al. The plant pathogen Phytophthora andina emerged via hybridization of an unknown Phytophthora species and the Irish potato famine pathogen, P. infestans. PLoS ONE 2011, 6:e24543.
50. Ersek T., Nagy Z.A. Species hybrids in the genus Phytophthora with emphasis on the alder pathogen Phytophthora alni: a review. Eur. J. Plant Pathol. 2008, 122:31-39.
51. Brasier C.M. The rise of the hybrid fungi. Nature 2000, 405:134-135.
52. Martin F.N. Mitochondrial haplotype determination in the oomycete plant pathogen Phytophthora ramorum. Curr. Genet. 2008, 54:23-34.
53. Pérez-Sierra A., et al. Genetic diversity, sensitivity to phenylamide fungicides and aggressiveness of Phytophthora ramorum on Camellia, Rhododendron and Viburnum plants in Spain. Plant Pathol. 2011, 60:1069-1076.
54. Hansen E.M., et al. Epidemiology of Phytophthora ramorum in Oregon tanoak forests. Can. J. Forest Res. 2008, 38:1133-1143.
55. Jules E.S., et al. Spread of an invasive pathogen over a variable landscape: a nonnative root rot on Port Orford cedar. Ecology 2002, 83:3167-3181.
56. Sutton W., et al. Stream monitoring for detection of Phytophthora ramorum in Oregon tanoak forests. Plant Dis. 2009, 93:1182-1186.
57. Cushman J.H., Meentemeyer R.K. Multi-scale patterns of human activity and the incidence of an exotic forest pathogen. J. Ecol. 2008, 96:766-776.
58. Brown A.V., Brasier C.M. Colonization of tree xylem by Phytophthora ramorum, P. kernoviae and other Phytophthora species. Plant Pathol. 2007, 56:227-241.
59. Tjosvold S.A., et al. Disease risk of potting media infested with Phytophthora ramorum under nursery conditions. Plant Dis. 2009, 93:371-376.
60. Hyder N., et al. Viability of oomycete propagules following ingestion and excretion by fungus gnats, shore flies, and snails. Plant Dis. 2009, 93:720-726.
61. Goodwin S.B., et al. Panglobal distribution of a single clonal lineage of the Irish potato famine fungus. Proc. Natl. Acad. Sci. U.S.A. 1994, 91:11591-11595.
62. Anagnostakis S. The effect of multiple importations of pests and pathogens on a native tree. Biol. Invasions 2001, 3:245-254.
63. Brasier C.M., Buck K.W. Rapid evolutionary changes in a globally invading fungal pathogen (Dutch Elm Disease). Biol. Invasions 2001, 3:223-233.
64. Zaffarano P.L., et al. Rapid speciation following recent host shifts in the plant pathogenic fungus Rhynchosporium. Evolution 2008, 62:1418-1436.
65. Brasier C.M., et al. Origin of a new Phytophthora pathogen through interspecific hybridization. Proc. Natl. Acad. Sci. U.S.A. 1999, 96:5878-5883.
66. Friesen T.L., et al. Emergence of a new disease as a result of interspecific virulence gene transfer. Nat. Genet. 2006, 38:953-956.
67. Ma L.J., et al. Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium. Nature 2010, 464:367-373.
68. Goodwin S.B., et al. Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity, and stealth pathogenesis. PLoS Genet. 2011, 7:e1002070.
69. Newcombe G., et al. Melampsora × columbiana, a natural hybrid of M. medusae and M. occidentalis. Mycol. Res. 2000, 104:261-274.
70. Brasier C.M. Rapid evolution of introduced plant pathogens via interspecific hybridization. Bioscience 2001, 51:123-133.
71. Gonthier P., et al. Invasion of European pine stands by a North American forest pathogen and its hybridization with a native interfertile taxon. Mol. Ecol. 2007, 16:1389-1400.