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Volumn 11, Issue 3, 2012, Pages 1561-1570

Proteomic profiling of H-Ras-G12V induced hypertrophic cardiomyopathy in transgenic mice using comparative LC-MS analysis of thin fresh-frozen tissue sections

Author keywords

comparative proteomic profiling; fresh frozen tissue; H Ras; hypertrophic cardiomyopathy; methanol based solubilization digestion; method development; pathway analysis

Indexed keywords

BETA CATENIN; GLYCOGEN SYNTHASE KINASE 3BETA; H RAS PROTEIN; METHANOL; PHOSPHOPROTEIN; RAS PROTEIN; UNCLASSIFIED DRUG; WNT3A PROTEIN;

EID: 84857851005     PISSN: 15353893     EISSN: 15353907     Source Type: Journal    
DOI: 10.1021/pr200612y     Document Type: Conference Paper
Times cited : (14)

References (41)
  • 1
    • 34548361955 scopus 로고    scopus 로고
    • Recent advances in protein profiling of tissues and tissue fluids
    • Yang, S.; Huang, C. M. Recent advances in protein profiling of tissues and tissue fluids Expert Rev. Proteomics 2007, 4 (4) 515-29
    • (2007) Expert Rev. Proteomics , vol.4 , Issue.4 , pp. 515-29
    • Yang, S.1    Huang, C.M.2
  • 2
    • 13844312493 scopus 로고    scopus 로고
    • Assessment of tumor characteristic gene expression in cell lines using a tissue similarity index (TSI)
    • Sandberg, R.; Ernberg, I. Assessment of tumor characteristic gene expression in cell lines using a tissue similarity index (TSI) Proc. Natl. Acad. Sci. U. S. A. 2005, 102 (6) 2052-7
    • (2005) Proc. Natl. Acad. Sci. U. S. A. , vol.102 , Issue.6 , pp. 2052-7
    • Sandberg, R.1    Ernberg, I.2
  • 4
    • 0034468232 scopus 로고    scopus 로고
    • Beyond the genome to tissue proteomics
    • Liotta, L. A.; Petricoin, E. F. Beyond the genome to tissue proteomics Breast Cancer Res. 2000, 2 (1) 13-4
    • (2000) Breast Cancer Res. , vol.2 , Issue.1 , pp. 13-4
    • Liotta, L.A.1    Petricoin, E.F.2
  • 5
    • 60749091249 scopus 로고    scopus 로고
    • Targeted cancer therapeutics
    • discussion 1267
    • Hait, W. N.; Hambley, T. W. Targeted cancer therapeutics Cancer Res. 2009, 69 (4) 1263-7 discussion 1267.
    • (2009) Cancer Res. , vol.69 , Issue.4 , pp. 1263-7
    • Hait, W.N.1    Hambley, T.W.2
  • 6
    • 1042278730 scopus 로고    scopus 로고
    • Blasting into the microworld of tissue proteomics: A new window on cancer
    • Geho, D. H.; Petricoin, E. F.; Liotta, L. A. Blasting into the microworld of tissue proteomics: a new window on cancer Clin. Cancer Res. 2004, 10 (3) 825-7
    • (2004) Clin. Cancer Res. , vol.10 , Issue.3 , pp. 825-7
    • Geho, D.H.1    Petricoin, E.F.2    Liotta, L.A.3
  • 9
    • 0032555959 scopus 로고    scopus 로고
    • Expression of proto-oncogenes and gene mutation of sarcomeric proteins in patients with hypertrophic cardiomyopathy
    • Kai, H.; Muraishi, A.; Sugiu, Y.; Nishi, H.; Seki, Y.; Kuwahara, F.; Kimura, A.; Kato, H.; Imaizumi, T. Expression of proto-oncogenes and gene mutation of sarcomeric proteins in patients with hypertrophic cardiomyopathy Circ. Res. 1998, 83 (6) 594-601
    • (1998) Circ. Res. , vol.83 , Issue.6 , pp. 594-601
    • Kai, H.1    Muraishi, A.2    Sugiu, Y.3    Nishi, H.4    Seki, Y.5    Kuwahara, F.6    Kimura, A.7    Kato, H.8    Imaizumi, T.9
  • 10
    • 3242793344 scopus 로고    scopus 로고
    • Ras, PI3-kinase and mTOR signaling in cardiac hypertrophy
    • Proud, C. G. Ras, PI3-kinase and mTOR signaling in cardiac hypertrophy Cardiovasc. Res. 2004, 63 (3) 403-13
    • (2004) Cardiovasc. Res. , vol.63 , Issue.3 , pp. 403-13
    • Proud, C.G.1
  • 11
    • 0347381135 scopus 로고    scopus 로고
    • Ras, Akt, and mechanotransduction in the cardiac myocyte
    • Sugden, P. H. Ras, Akt, and mechanotransduction in the cardiac myocyte Circ. Res. 2003, 93 (12) 1179-92
    • (2003) Circ. Res. , vol.93 , Issue.12 , pp. 1179-92
    • Sugden, P.H.1
  • 13
    • 2642531954 scopus 로고    scopus 로고
    • The pathology of hypertrophic cardiomyopathy
    • Hughes, S. E. The pathology of hypertrophic cardiomyopathy Histopathology 2004, 44 (5) 412-27
    • (2004) Histopathology , vol.44 , Issue.5 , pp. 412-27
    • Hughes, S.E.1
  • 14
    • 0942276251 scopus 로고    scopus 로고
    • A detergent- and cyanogen bromide-free method for integral membrane proteomics: Application to Halobacterium purple membranes and the human epidermal membrane proteome
    • Blonder, J.; Conrads, T. P.; Yu, L. R.; Terumuma, A.; Janini, G. M.; Issaq, H. J.; Vogel, J.; Veenstra, T. D. A detergent- and cyanogen bromide-free method for integral membrane proteomics: Application to Halobacterium purple membranes and the human epidermal membrane proteome Proteomics 2004, 4, 31-45
    • (2004) Proteomics , vol.4 , pp. 31-45
    • Blonder, J.1    Conrads, T.P.2    Yu, L.R.3    Terumuma, A.4    Janini, G.M.5    Issaq, H.J.6    Vogel, J.7    Veenstra, T.D.8
  • 15
    • 14844360847 scopus 로고    scopus 로고
    • Probability-based evaluation of peptide and protein identifications from tandem mass spectrometry and SEQUEST analysis: The human proteome
    • Qian, W. J.; Liu, T.; Monroe, M. E.; Strittmatter, E. F.; Jacobs, J. M.; Kangas, L. J.; Petritis, K.; Camp, D. G., 2nd; Smith, R. D. Probability-based evaluation of peptide and protein identifications from tandem mass spectrometry and SEQUEST analysis: the human proteome J. Proteome Res. 2005, 4 (1) 53-62
    • (2005) J. Proteome Res. , vol.4 , Issue.1 , pp. 53-62
    • Qian, W.J.1    Liu, T.2    Monroe, M.E.3    Strittmatter, E.F.4    Jacobs, J.M.5    Kangas, L.J.6    Petritis, K.7    Smith, R.D.8
  • 16
    • 3242731195 scopus 로고    scopus 로고
    • A model for random sampling and estimation of relative protein abundance in shotgun proteomics
    • Liu, H.; Sadygov, R. G.; Yates, J. R., 3rd. A model for random sampling and estimation of relative protein abundance in shotgun proteomics Anal. Chem. 2004, 76 (14) 4193-201
    • (2004) Anal. Chem. , vol.76 , Issue.14 , pp. 4193-201
    • Liu, H.1    Sadygov, R.G.2    Yates III, J.R.3
  • 17
    • 61449172037 scopus 로고    scopus 로고
    • Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
    • Huang, D. W.; Sherman, B. T.; Lempicki, R. A. Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources Nat. Protoc. 2009, 4 (1) 44-57
    • (2009) Nat. Protoc. , vol.4 , Issue.1 , pp. 44-57
    • Huang, D.W.1    Sherman, B.T.2    Lempicki, R.A.3
  • 19
    • 70349991237 scopus 로고    scopus 로고
    • Optimization of protein solubilization for the analysis of the CD14 human monocyte membrane proteome using LC-MS/MS
    • Ye, X.; Johann, D. J., Jr.; Hakami, R. M.; Xiao, Z.; Meng, Z.; Ulrich, R. G.; Issaq, H. J.; Veenstra, T. D.; Blonder, J. Optimization of protein solubilization for the analysis of the CD14 human monocyte membrane proteome using LC-MS/MS J. Proteomics 2009, 73 (1) 112-22
    • (2009) J. Proteomics , vol.73 , Issue.1 , pp. 112-22
    • Ye, X.1    Johann Jr., D.J.2    Hakami, R.M.3    Xiao, Z.4    Meng, Z.5    Ulrich, R.G.6    Issaq, H.J.7    Veenstra, T.D.8    Blonder, J.9
  • 21
    • 0042691509 scopus 로고    scopus 로고
    • Nuclear membrane proteins with potential disease links found by subtractive proteomics
    • Schirmer, E. C.; Florens, L.; Guan, T.; Yates, J. R., 3rd; Gerace, L. Nuclear membrane proteins with potential disease links found by subtractive proteomics Science 2003, 301 (5638) 1380-2
    • (2003) Science , vol.301 , Issue.5638 , pp. 1380-2
    • Schirmer, E.C.1    Florens, L.2    Guan, T.3    Yates III, J.R.4    Gerace, L.5
  • 23
    • 34248598796 scopus 로고    scopus 로고
    • Trends in sample preparation for classical and second generation proteomics
    • Canas, B.; Pineiro, C.; Calvo, E.; Lopez-Ferrer, D.; Gallardo, J. M. Trends in sample preparation for classical and second generation proteomics J. Chromatogr., A 2007, 1153 (1-2) 235-58
    • (2007) J. Chromatogr., A , vol.1153 , Issue.1-2 , pp. 235-58
    • Canas, B.1    Pineiro, C.2    Calvo, E.3    Lopez-Ferrer, D.4    Gallardo, J.M.5
  • 24
    • 58149147240 scopus 로고    scopus 로고
    • Sample preparation and fractionation for proteome analysis and cancer biomarker discovery by mass spectrometry
    • Ahmed, F. E. Sample preparation and fractionation for proteome analysis and cancer biomarker discovery by mass spectrometry J. Sep. Sci. 2009, 32 (5-6) 771-98
    • (2009) J. Sep. Sci. , vol.32 , Issue.5-6 , pp. 771-98
    • Ahmed, F.E.1
  • 25
    • 67651173106 scopus 로고    scopus 로고
    • Proteomics by mass spectrometry: Approaches, advances, and applications
    • Yates, J. R.; Ruse, C. I.; Nakorchevsky, A. Proteomics by mass spectrometry: approaches, advances, and applications Annu. Rev. Biomed. Eng. 2009, 11, 49-79
    • (2009) Annu. Rev. Biomed. Eng. , vol.11 , pp. 49-79
    • Yates, J.R.1    Ruse, C.I.2    Nakorchevsky, A.3
  • 26
    • 66749148302 scopus 로고    scopus 로고
    • Approaching solid tumor heterogeneity on a cellular basis by tissue proteomics using laser capture microdissection and biological mass spectrometry
    • Johann, D. J.; Rodriguez-Canales, J.; Mukherjee, S.; Prieto, D. A.; Hanson, J. C.; Emmert-Buck, M.; Blonder, J. Approaching solid tumor heterogeneity on a cellular basis by tissue proteomics using laser capture microdissection and biological mass spectrometry J. Proteome Res. 2009, 8 (5) 2310-8
    • (2009) J. Proteome Res. , vol.8 , Issue.5 , pp. 2310-8
    • Johann, D.J.1    Rodriguez-Canales, J.2    Mukherjee, S.3    Prieto, D.A.4    Hanson, J.C.5    Emmert-Buck, M.6    Blonder, J.7
  • 27
    • 34047189384 scopus 로고    scopus 로고
    • Bypassing heterogeneity: The road to embryonic stem cell-derived cardiomyocyte specification
    • Singh, A. M.; Terada, N. Bypassing heterogeneity: the road to embryonic stem cell-derived cardiomyocyte specification Trends Cardiovasc. Med. 2007, 17 (3) 96-101
    • (2007) Trends Cardiovasc. Med. , vol.17 , Issue.3 , pp. 96-101
    • Singh, A.M.1    Terada, N.2
  • 28
    • 33846966331 scopus 로고    scopus 로고
    • Differences between pathological and physiological cardiac hypertrophy: Novel therapeutic strategies to treat heart failure
    • McMullen, J. R.; Jennings, G. L. Differences between pathological and physiological cardiac hypertrophy: novel therapeutic strategies to treat heart failure Clin. Exp. Pharmacol. Physiol. 2007, 34 (4) 255-62
    • (2007) Clin. Exp. Pharmacol. Physiol. , vol.34 , Issue.4 , pp. 255-62
    • McMullen, J.R.1    Jennings, G.L.2
  • 29
    • 41349106140 scopus 로고    scopus 로고
    • The Wnt/frizzled/GSK-3 beta pathway: A novel therapeutic target for cardiac hypertrophy
    • Blankesteijn, W. M.; van de Schans, V. A.; ter Horst, P.; Smits, J. F. The Wnt/frizzled/GSK-3 beta pathway: a novel therapeutic target for cardiac hypertrophy Trends Pharmacol. Sci. 2008, 29 (4) 175-80
    • (2008) Trends Pharmacol. Sci. , vol.29 , Issue.4 , pp. 175-80
    • Blankesteijn, W.M.1    Van De Schans, V.A.2    Ter Horst, P.3    Smits, J.F.4
  • 31
    • 33751242287 scopus 로고    scopus 로고
    • Activation of beta-catenin signaling pathways by classical G-protein-coupled receptors: Mechanisms and consequences in cycling and non-cycling cells
    • Shevtsov, S. P.; Haq, S.; Force, T. Activation of beta-catenin signaling pathways by classical G-protein-coupled receptors: mechanisms and consequences in cycling and non-cycling cells Cell Cycle 2006, 5 (20) 2295-300
    • (2006) Cell Cycle , vol.5 , Issue.20 , pp. 2295-300
    • Shevtsov, S.P.1    Haq, S.2    Force, T.3
  • 32
    • 40349098058 scopus 로고    scopus 로고
    • Glycogen synthase kinase 3 (GSK3) in the heart: A point of integration in hypertrophic signalling and a therapeutic target? A critical analysis
    • Sugden, P. H.; Fuller, S. J.; Weiss, S. C.; Clerk, A. Glycogen synthase kinase 3 (GSK3) in the heart: a point of integration in hypertrophic signalling and a therapeutic target? A critical analysis Br. J. Pharmacol. 2008, 153 (Suppl 1) S137-53
    • (2008) Br. J. Pharmacol. , vol.153 , Issue.SUPPL. 1 , pp. 137-53
    • Sugden, P.H.1    Fuller, S.J.2    Weiss, S.C.3    Clerk, A.4
  • 33
    • 20044391985 scopus 로고    scopus 로고
    • Cell adhesion and signal transduction in cancer. Conference on cadherins, catenins and cancer
    • Birchmeier, W. Cell adhesion and signal transduction in cancer. Conference on cadherins, catenins and cancer EMBO Rep. 2005, 6 (5) 413-7
    • (2005) EMBO Rep. , vol.6 , Issue.5 , pp. 413-7
    • Birchmeier, W.1
  • 34
    • 30644458570 scopus 로고    scopus 로고
    • Balancing cell adhesion and Wnt signaling, the key role of beta-catenin
    • Brembeck, F. H.; Rosario, M.; Birchmeier, W. Balancing cell adhesion and Wnt signaling, the key role of beta-catenin Curr. Opin. Genet. Dev. 2006, 16 (1) 51-9
    • (2006) Curr. Opin. Genet. Dev. , vol.16 , Issue.1 , pp. 51-9
    • Brembeck, F.H.1    Rosario, M.2    Birchmeier, W.3
  • 36
    • 0037237653 scopus 로고    scopus 로고
    • Dilated cardiomyopathy: A disease of the intercalated disc?
    • Perriard, J. C.; Hirschy, A.; Ehler, E. Dilated cardiomyopathy: a disease of the intercalated disc? Trends Cardiovasc. Med. 2003, 13 (1) 30-8
    • (2003) Trends Cardiovasc. Med. , vol.13 , Issue.1 , pp. 30-8
    • Perriard, J.C.1    Hirschy, A.2    Ehler, E.3
  • 37
    • 79952268278 scopus 로고    scopus 로고
    • Cardiac tissue-restricted deletion of plakoglobin results in progressive cardiomyopathy and activation of {beta}-catenin signaling
    • Li, J.; Swope, D.; Raess, N.; Cheng, L.; Muller, E. J.; Radice, G. L. Cardiac tissue-restricted deletion of plakoglobin results in progressive cardiomyopathy and activation of {beta}-catenin signaling Mol. Cell. Biol. 2011, 31 (6) 1134-44
    • (2011) Mol. Cell. Biol. , vol.31 , Issue.6 , pp. 1134-44
    • Li, J.1    Swope, D.2    Raess, N.3    Cheng, L.4    Muller, E.J.5    Radice, G.L.6


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