Autosomal monoallelic expression in the mouse

Genome Biology

Volumn 13, Issue 2, 2012, Pages

  Zwemer, Lillian M ^a   Zak, Alexander ^b,e   Thompson, Benjamin R ^b   Kirby, Andrew ^a   Daly, Mark J ^a   Chess, Andrew ^a,c   Gimelbrant, Alexander A ^b,d  

^a MASSACHUSETTS GENERAL HOSPITAL   (United States)

^b DANA FARBER CANCER INSTITUTE   (United States)

^c MOUNT SINAI SCHOOL OF MEDICINE   (United States)

^d HARVARD MEDICAL SCHOOL   (United States)

^e PFIZER INC   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEMENTARY DNA;

ALLELE; ANIMAL EXPERIMENT; ARTICLE; AUTOSOME; CELL TYPE; CONTROLLED STUDY; FEMALE; GENE EXPRESSION; GENE MAPPING; GENETIC ASSOCIATION; GENETIC POLYMORPHISM; GENETIC VARIABILITY; GENOTYPE PHENOTYPE CORRELATION; HETEROZYGOTE; HUMAN; MALE; MOUSE; MOUSE STRAIN; NONHUMAN; ORTHOLOGY; PHENOTYPIC VARIATION; X CHROMOSOME INACTIVATION; ALLELIC IMBALANCE; ANIMAL; CHROMOSOME; DNA MICROARRAY; GENETICS; GENOME; GENOTYPE; SINGLE NUCLEOTIDE POLYMORPHISM; X CHROMOSOME;

PRIMATES; RODENTIA;

ALLELES; ALLELIC IMBALANCE; ANIMALS; CHROMOSOMES; GENE EXPRESSION; GENETIC ASSOCIATION STUDIES; GENOME; GENOTYPE; HUMANS; MICE; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; POLYMORPHISM, SINGLE NUCLEOTIDE; X CHROMOSOME;

EID: 84857133536     PISSN: 14747596     EISSN: 1474760X     Source Type: Journal    
DOI: 10.1186/gb-2012-13-2-r10     Document Type: Article

References (22)

1. Reik W, Walter J. Genomic imprinting: parental influence on the genome. Nat Rev Genet 2001, 2:21-32.
2. Lyon MF. Gene action in the X-chromosome of the mouse (Mus musculus L.). Nature 1961, 190:372-373. 10.1038/190372a0, 13764598.
3. Chess A, Simon I, Cedar H, Axel R. Allelic inactivation regulates olfactory receptor gene expression. Cell 1994, 78:823-834. 10.1016/S0092-8674(94)90562-2, 8087849.
4. Hollander GA, Zuklys S, Morel C, Mizoguchi E, Mobisson K, Simpson S, Terhorst C, Wishart W, Golan DE, Bhan AK, Burakoff SJ. Monoallelic expression of the interleukin-2 locus. Science 1998, 279:2118-2121. 10.1126/science.279.5359.2118, 9516115.
5. Pernis B, Chiappino G, Kelus AS, Gell PG. Cellular localization of immunoglobulins with different allotypic specificities in rabbit lymphoid tissues. J Exp Med 1965, 122:853-876. 10.1084/jem.122.5.853, 2138120, 4159057.
6. Rajewsky K. Clonal selection and learning in the antibody system. Nature 1996, 381:751-758. 10.1038/381751a0, 8657279.
7. Bix M, Locksley RM. Independent and epigenetic regulation of the interleukin-4 alleles in CD4+ T cells. Science 1998, 281:1352-1354.
8. Rhoades KL, Singh N, Simon I, Glidden B, Cedar H, Chess A. Allele-specific expression patterns of interleukin-2 and Pax-5 revealed by a sensitive single-cell RT-PCR analysis. Curr Biol 2000, 10:789-792. 10.1016/S0960-9822(00)00565-0, 10898982.
9. Gimelbrant AA, Ensminger AW, Qi P, Zucker J, Chess A. Monoallelic expression and asynchronous replication of p120 catenin in mouse and human cells. J Biol Chem 2005, 280:1354-1359.
10. Gimelbrant A, Hutchinson JN, Thompson BR, Chess A. Widespread monoallelic expression on human autosomes. Science 2007, 318:1136-1140. 10.1126/science.1148910, 18006746.
11. Wang J, Valo Z, Smith D, Singer-Sam J. Monoallelic expression of multiple genes in the CNS. PloS One 2007, 2:e1293. 10.1371/journal.pone.0001293, 2100171, 18074017.
12. Riviere I, Sunshine MJ, Littman DR. Regulation of IL-4 expression by activation of individual alleles. Immunity 1998, 9:217-228. 10.1016/S1074-7613(00)80604-4, 9729042.
13. Hu-Li J, Pannetier C, Guo L, Lohning M, Gu H, Watson C, Assenmacher M, Radbruch A, Paul WE. Regulation of expression of IL-4 alleles: analysis using a chimeric GFP/IL-4 gene. Immunity 2001, 14:1-11. 10.1016/S1074-7613(01)00084-X, 11163225.
14. Kirby A, Kang HM, Wade CM, Cotsapas C, Kostem E, Han B, Furlotte N, Kang EY, Rivas M, Bogue MA, Frazer KA, Johnson FM, Beilharz EJ, Cox DR, Eskin E, Daly MJ. Fine mapping in 94 inbred mouse strains using a high-density haplotype resource. Genetics 2010, 185:1081-1095. 10.1534/genetics.110.115014, 2907194, 20439770.
15. Percec I, Plenge RM, Nadeau JH, Bartolomei MS, Willard HF. Autosomal dominant mutations affecting X inactivation choice in the mouse. Science 2002, 296:1136-1139. 10.1126/science.1070087, 12004136.
16. Cattanach BM, Williams CE. Evidence of non-random X chromosome activity in the mouse. Genet Res 1972, 19:229-240. 10.1017/S001667230001449X, 5075805.
17. Foote M, Hunter JP, Janis CM, Sepkoski JJ. Evolutionary and preservational constraints on origins of biologic groups: divergence times of eutherian mammals. Science 1999, 283:1310-1314. 10.1126/science.283.5406.1310, 10037598.
18. Cheung VG, Spielman RS. Genetics of human gene expression: mapping DNA variants that influence gene expression. Nat Rev Genet 2009, 10:595-604. 2989458, 19636342.
19. Morcos L, Ge B, Koka V, Lam KC, Pokholok DK, Gunderson KL, Montpetit A, Verlaan DJ, Pastinen T. Genome-wide assessment of imprinted expression in human cells. Genome Biol 2011, 12:R25. 10.1186/gb-2011-12-3-r25, 3129675, 21418647.
20. van Rietschoten JG, Verzijlbergen KF, Gringhuis SI, van der Pouw Kraan TC, Bayley JP, Wierenga EA, Jones PA, Kooter JM, Verweij CL. Differentially methylated alleles in a distinct region of the human interleukin-1alpha promoter are associated with allele-specific expression of IL-1alpha in CD4+ T cells. Blood 2006, 108:2143-2149. 10.1182/blood-2006-01-021147, 1895553, 16788102.
21. Rosenberg N, Baltimore D, Scher CD. In vitro transformation of lymphoid cells by Abelson murine leukemia virus. Proc Natl Acad Sci USA 1975, 72:1932-1936. 10.1073/pnas.72.5.1932, 432662, 168584.
22. Takagi N, Sasaki M. Preferential inactivation of the paternally derived X chromosome in the extraembryonic membranes of the mouse. Nature 1975, 256:640-642. 10.1038/256640a0, 1152998.