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Volumn 5, Issue , 2007, Pages 27-36

Subtle motif discovery for detection of dna regulatory sites

Author keywords

Binding sites; Consensus motifs; Pattern discovery; Subtle motifs; Transcription factors

Indexed keywords

BENCHMARK DATA; BINDING FACTORS; CONSENSUS MOTIF; FUNCTIONAL DOMAINS; LITMUS TEST; MOTIF DISCOVERY; MULTIPLE SEQUENCES; PATTERN DISCOVERY; SUBTLE MOTIFS;

EID: 84857005866     PISSN: 17516404     EISSN: None     Source Type: Conference Proceeding    
DOI: None     Document Type: Conference Paper
Times cited : (7)

References (16)
  • 5
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    • Finding composite regulatory patterns in DNA sequences
    • Eleazar Eskin and Pavel Pevzner. Finding composite regulatory patterns in DNA sequences. In Bioinformatics, volume 18, pages 354-363, 2002.
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    • Eskin, E.1    Pevzner, P.2
  • 6
    • 0032826179 scopus 로고    scopus 로고
    • Identifying DNA and protein patterns with statistically significant alignments of multiple sequences
    • G. Z. Hertz and G. D. Stormo. Identifying DNA and protein patterns with statistically significant alignments of multiple sequences. Bioinformatics, 15:563-577, 1999.
    • (1999) Bioinformatics , vol.15 , pp. 563-577
    • Hertz, G.Z.1    Stormo, G.D.2
  • 8
    • 0036772507 scopus 로고    scopus 로고
    • Subtle motifs: Defining the limits of motif finding algorithms
    • Uri Keich and Pavel Pevzner. Subtle motifs: defining the limits of motif finding algorithms. In Bioinformatics, volume 18, pages 1382-1390, 2002.
    • (2002) Bioinformatics , vol.18 , pp. 1382-1390
    • Keich, U.1    Pevzner, P.2
  • 9
    • 0025320805 scopus 로고
    • An expectaion maximization (EM) algorithm for the identification and characterization of common sites in unaligned biopolymer sequences
    • C. E. Lawrence and Reilly A.A. An expectaion maximization (EM) algorithm for the identification and characterization of common sites in unaligned biopolymer sequences. Proteins: Structure, Function and Genetics, 7:41-51, 1990.
    • (1990) Proteins: Structure, Function and Genetics , vol.7 , pp. 41-51
    • Lawrence, C.E.1    Reilly, A.A.2
  • 10
    • 0027912333 scopus 로고
    • Detecting subtle sequence signals: A Gibbs sampling strategy for multiple alignment
    • Oct
    • C. E. Lawrence, S. F. Altschul, M. S. Boguski, J. S. Liu, A. F. Neuwald, and J. C. Wootton. Detecting subtle sequence signals: A Gibbs sampling strategy for multiple alignment. Science, 262:208-214, Oct, 1993.
    • (1993) Science , vol.262 , pp. 208-214
    • Lawrence, C.E.1    Altschul, S.F.2    Boguski, M.S.3    Liu, J.S.4    Neuwald, A.F.5    Wootton, J.C.6
  • 12
    • 2342476143 scopus 로고    scopus 로고
    • Finding subtle motifs by branching from sample strings
    • Alkes Price, Sriram Ramabhadran, and Pavel Pevzner. Finding subtle motifs by branching from sample strings. In Bioinformatics, number 1, pages 149-155, 2003.
    • (2003) Bioinformatics , Issue.1 , pp. 149-155
    • Price, A.1    Ramabhadran, S.2    Pevzner, P.3
  • 16
    • 0021665479 scopus 로고
    • Pattern recognition in several sequences: Consensus and alignment
    • M.S. Waterman, R. Aratia, and D.J. Galas. Pattern recognition in several sequences: Consensus and alignment. Bulletin of Mathematical Biology, 46(4):515-527, 1984.
    • (1984) Bulletin of Mathematical Biology , vol.46 , Issue.4 , pp. 515-527
    • Waterman, M.S.1    Aratia, R.2    Galas, D.J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.