-
1
-
-
0036375939
-
Monotony of surprise and large-scale quest for unusual words
-
ACM Press, Washington, DC
-
Apostolico, A., Bock, M. and Lonardi, S. (2002) Monotony of surprise and large-scale quest for unusual words. Proceedings of the Sixth Annual International Conference on Research in Computational Molecular Biology (RECOMB-02). ACM Press, Washington, DC, pp. 22-31.
-
(2002)
Proceedings of the Sixth Annual International Conference on Research in Computational Molecular Biology (RECOMB-02)
, pp. 22-31
-
-
Apostolico, A.1
Bock, M.2
Lonardi, S.3
-
2
-
-
0028685490
-
Fitting a mixture model by expectation maximization to discover motifs in biopolymers
-
AAAI Press, Menlo Park, CA
-
Bailey, T. and Elkan, C. (1994) Fitting a mixture model by expectation maximization to discover motifs in biopolymers. Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology (ISMB-94). AAAI Press, Menlo Park, CA, pp. 28-36.
-
(1994)
Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology (ISMB-94)
, pp. 28-36
-
-
Bailey, T.1
Elkan, C.2
-
3
-
-
0029197507
-
The value of prior knowledge in discovering motifs with MEME
-
AAAI Press, Cambridge, England
-
Bailey, T. and Elkan, C. (1995) The value of prior knowledge in discovering motifs with MEME. Proceedings of the Third International Conference on Intelligent Systems for Molecular Biology (ISMB-95). AAAI Press, Cambridge, England, pp. 21-29.
-
(1995)
Proceedings of the Third International Conference on Intelligent Systems for Molecular Biology (ISMB-95)
, pp. 21-29
-
-
Bailey, T.1
Elkan, C.2
-
6
-
-
0034823882
-
Finding motifs using random projections
-
ACM Press, Montreal, Canada
-
Buhler, J. and Tompa, M. (2001) Finding motifs using random projections. Proceedings of the Fifth Annual International Conference on Research in Computational Molecular Biology (RECOMB-01). ACM Press, Montreal, Canada, pp. 69-76.
-
(2001)
Proceedings of the Fifth Annual International Conference on Research in Computational Molecular Biology (RECOMB-01)
, pp. 69-76
-
-
Buhler, J.1
Tompa, M.2
-
7
-
-
0344376570
-
Finding composite regulatory patterns in DNA sequences
-
Proceedings of the Tenth International Conference on Intelligent Systems for Molecular Biology(ISMB-02)
-
Eskin, E. and Pevzner, P. (2002) Finding composite regulatory patterns in DNA sequences. Bioinformatics, Proceedings of the Tenth International Conference on Intelligent Systems for Molecular Biology(ISMB-02), S1, pp. 354-363.
-
(2002)
Bioinformatics
, vol.S1
, pp. 354-363
-
-
Eskin, E.1
Pevzner, P.2
-
8
-
-
0022358896
-
Rigorous pattern-recognition methods for DNA sequences. Analysis of promoter sequences from Escherichia coli
-
Galas, D., Eggert, M. and Waterman, M. (1985) Rigorous pattern-recognition methods for DNA sequences. Analysis of promoter sequences from Escherichia coli. J. Mol. Biol., 186, 117-128.
-
(1985)
J. Mol. Biol.
, vol.186
, pp. 117-128
-
-
Galas, D.1
Eggert, M.2
Waterman, M.3
-
9
-
-
0032826179
-
Identifying DNA and protein patterns with statistically significant alignments of multiple sequences
-
Hertz, G. and Stormo, G. (1999) Identifying DNA and protein patterns with statistically significant alignments of multiple sequences. Bioinformatics, 15, 563-577.
-
(1999)
Bioinformatics
, vol.15
, pp. 563-577
-
-
Hertz, G.1
Stormo, G.2
-
10
-
-
0036772332
-
Finding motifs in the twilight zone
-
Keich, U. and Pevzner, P. (2002a) Finding motifs in the twilight zone. Bioinformatics, 18, 1374-1381.
-
(2002)
Bioinformatics
, vol.18
, pp. 1374-1381
-
-
Keich, U.1
Pevzner, P.2
-
11
-
-
0036772507
-
Subtle motifs: Defining the limits of motif finding algorithms
-
Keich, U. and Pevzner, P. (2002b) Subtle motifs: defining the limits of motif finding algorithms. Bioinformatics, 18, 1382-1390.
-
(2002)
Bioinformatics
, vol.18
, pp. 1382-1390
-
-
Keich, U.1
Pevzner, P.2
-
12
-
-
0027912333
-
Detecting subtle sequence signals: A Gibbs sampling strategy for multiple alignment
-
Lawrence, C., Altschul, S., Boguski, M., Liu, J., Neuwald, A. and Wootton, J. (1993) Detecting subtle sequence signals: a Gibbs sampling strategy for multiple alignment. Science, 262, 208-214.
-
(1993)
Science
, vol.262
, pp. 208-214
-
-
Lawrence, C.1
Altschul, S.2
Boguski, M.3
Liu, J.4
Neuwald, A.5
Wootton, J.6
-
13
-
-
0033677426
-
Algorithms for extracting structured motifs using a suffix tree with an application to promoter and regulatory site consensus identification
-
Marsan, L. and Sagot, M. (2000) Algorithms for extracting structured motifs using a suffix tree with an application to promoter and regulatory site consensus identification. J. Comput. Biol., 7(3-4), 345-362.
-
(2000)
J. Comput. Biol.
, vol.7
, Issue.3-4
, pp. 345-362
-
-
Marsan, L.1
Sagot, M.2
-
14
-
-
0035224579
-
An algorithm for finding signals of unknown length in DNA sequences
-
Proceedings of the Ninth International Conference on Intelligent Systems for Molecular Biology (ISMB-01)
-
Pavesi, G., Mauri, G. and Pesole, G. (2001) An algorithm for finding signals of unknown length in DNA sequences. Bioinformatics, Proceedings of the Ninth International Conference on Intelligent Systems for Molecular Biology (ISMB-01), S1, pp. 207-214.
-
(2001)
Bioinformatics
, vol.S1
, pp. 207-214
-
-
Pavesi, G.1
Mauri, G.2
Pesole, G.3
-
15
-
-
0034565285
-
Combinatorial approaches to finding subtle signals in DNA sequences
-
AAAI Press, San Diego, California
-
Pevzner, P. and Sze, S. (2000) Combinatorial approaches to finding subtle signals in DNA sequences. Proceedings of the Eighth International Conference on Intelligent Systems for Molecular Biology (ISMB-OO). AAAI Press, San Diego, California, pp. 269-278.
-
(2000)
Proceedings of the Eighth International Conference on Intelligent Systems for Molecular Biology (ISMB-OO)
, pp. 269-278
-
-
Pevzner, P.1
Sze, S.2
-
16
-
-
0000900670
-
Spelling approximate or repeated motifs using a suffix tree
-
Sagot, M. (1998) Spelling approximate or repeated motifs using a suffix tree. Lecture Notes in Computer Science, 1380, 111-127.
-
(1998)
Lecture Notes in Computer Science
, vol.1380
, pp. 111-127
-
-
Sagot, M.1
-
17
-
-
0001936534
-
Searching for repeated words in a text allowing for mismatches and gaps
-
Valparaiso, Chile
-
Sagot, M., Escalier, V., Viari, A. and Soldano, H. (1995) Searching for repeated words in a text allowing for mismatches and gaps. Proceedings of the Second South American Workshop on String Processing. Valparaiso, Chile, pp. 87-100.
-
(1995)
Proceedings of the Second South American Workshop on String Processing
, pp. 87-100
-
-
Sagot, M.1
Escalier, V.2
Viari, A.3
Soldano, H.4
-
18
-
-
0000133199
-
Identifying protein-binding sites from unaligned DNA fragments
-
Stormo, G. and Hartzell III, G. (1989) Identifying protein-binding sites from unaligned DNA fragments. Proc. Natl Acad. Sci. USA, 86, 1183-1187.
-
(1989)
Proc. Natl. Acad. Sci. USA
, vol.86
, pp. 1183-1187
-
-
Stormo, G.1
Hartzell III, G.2
-
19
-
-
0034708338
-
Inferring regulatory elements from a whole genome. An analysis of Helicobacter pylori sigma(80) family of promoter signals
-
Vanet, A., Marsan, L., Labigne, A. and Sagot, M. (2000) Inferring regulatory elements from a whole genome. An analysis of Helicobacter pylori sigma(80) family of promoter signals. J. Mol. Biol., 297(2), 335-353.
-
(2000)
J. Mol. Biol.
, vol.297
, Issue.2
, pp. 335-353
-
-
Vanet, A.1
Marsan, L.2
Labigne, A.3
Sagot, M.4
-
20
-
-
0021665479
-
Pattern recognition in several sequences: Consensus and alignment
-
Waterman, M., Arratia, R. and Galas, E. (1984) Pattern recognition in several sequences: consensus and alignment. Bull. Math. Biol., 46, 515-527.
-
(1984)
Bull. Math. Biol.
, vol.46
, pp. 515-527
-
-
Waterman, M.1
Arratia, R.2
Galas, E.3
|