-
1
-
-
84976680267
-
A new approach to text searching
-
R. Baeza-Yates and G. H. Gonnet. A new approach to text searching. Commun. ACM, 35:74-82, 1992.
-
(1992)
Commun. ACM
, vol.35
, pp. 74-82
-
-
Baeza-Yates, R.1
Gonnet, G.H.2
-
2
-
-
0028964865
-
Generalized suffix trees for biological sequence data: Applications and implementations
-
IEEE Computer Society Press
-
P. Bieganski, J. Riedl, J. V. Carlis, and E.M. Retzel. Generalized suffix trees for biological sequence data: applications and implementations. In Proc. of the 27th Haruai Int. Conf. on Systems Sci., pages 35-44. IEEE Computer Society Press, 1994.
-
(1994)
Proc. Of the 27Th Haruai Int. Conf. On Systems Sci
, pp. 35-44
-
-
Bieganski, P.1
Riedl, J.2
Carlis, J.V.3
Retzel, E.M.4
-
3
-
-
0023045776
-
Sequence landscapes
-
B. Clift, D. Haussler, R. McConnell, T. D. Schneider, and G. D. Stormo. Sequence landscapes. Nucleic Acids Res., 14:141-158, 1986.
-
(1986)
Nucleic Acids Res
, vol.14
, pp. 141-158
-
-
Clift, B.1
Haussler, D.2
McConnell, R.3
Schneider, T.D.4
Stormo, G.D.5
-
4
-
-
84949229563
-
Fast identification of approximately matching substrings
-
In Z. Galil and E. Ukkonen, editors, Springer Verlag
-
A.L. Cobbs. Fast identification of approximately matching substrings. In Z. Galil and E. Ukkonen, editors, Combinatorial Pattern Matching, volume 937 of Lecture Notes in Computer Science, pages 41-54. Springer Verlag, 1995.
-
(1995)
Combinatorial Pattern Matching, Volume 937 of Lecture Notes in Computer Science
, pp. 41-54
-
-
Cobbs, A.L.1
-
5
-
-
0001444363
-
An optimal algorithm for computing the repetitions in a word
-
M. Crochemore. An optimal algorithm for computing the repetitions in a word. Inf. Proc. Letters, 12:244-250, 1981.
-
(1981)
Inf. Proc.Letters
, vol.12
, pp. 244-250
-
-
Crochemore, M.1
-
7
-
-
0022358896
-
Rigorous pattern-recognition methods for DNA sequences. Analysis of promoter sequences from Escherichia coli
-
D. J. Galas, M. Eggert, and M. S. Waterman. Rigorous pattern-recognition methods for DNA sequences. Analysis of promoter sequences from Escherichia coli. J. Mol. Biol, 186:117-128, 1985.
-
(1985)
J. Mol. Biol
, vol.186
, pp. 117-128
-
-
Galas, D.J.1
Eggert, M.2
Waterman, M.S.3
-
9
-
-
85006627991
-
Color set size problem with applications to string matching
-
In A. Apostolico, M. Crochemore, Z. Galil, and U. Manber, editors, Springer-Verlag
-
L. C. K. Hui. Color set size problem with applications to string matching. In A. Apostolico, M. Crochemore, Z. Galil, and U. Manber, editors, Combinatorial Pattern Matching, volume 644 of Lecture Notes in Computer Science, pages 230-243. Springer-Verlag, 1992.
-
(1992)
Combinatorial Pattern Matching, Volume 644 of Lecture Notes in Computer Science
, pp. 230-243
-
-
Hui, L.1
-
10
-
-
0025320805
-
An expectation maximization (EM) algorithm for the identification and characterization of common sites in unaligned biopolymer sequences
-
C. E. Lawrence and A. A. Reilly. An expectation maximization (EM) algorithm for the identification and characterization of common sites in unaligned biopolymer sequences. Proteins: struct., fund., and genetics, 7:41-51, 1990.
-
(1990)
Proteins: Struct., Fund., and Genetics
, vol.7
, pp. 41-51
-
-
Lawrence, C.E.1
Reilly, A.A.2
-
11
-
-
77957219723
-
A fast word search algorithm for the representation of sequence similarity in genomic DNA
-
C. Lefevre and J.-E. Ikeda. A fast word search algorithm for the representation of sequence similarity in genomic DNA. Nucleic Acids Res., 22:404-411, 1994.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 404-411
-
-
Lefevre, C.1
Ikeda, J.-E.2
-
12
-
-
0016942292
-
A space-economical suffix tree construction algorithm
-
E. M. McCreight. A space-economical suffix tree construction algorithm. J. ACM, 23:262-272, 1976.
-
(1976)
J. ACM
, vol.23
, pp. 262-272
-
-
McCreight, E.M.1
-
13
-
-
0028516571
-
A sublinear algorithm for approximate keyword searching
-
E. W. Myers. A sublinear algorithm for approximate keyword searching. Algorith-mica, 12:345-374, 1994.
-
(1994)
Algorith-Mica
, vol.12
, pp. 345-374
-
-
Myers, E.W.1
-
15
-
-
0001936534
-
Searching for repeated words in a text allowing for mismatches and gaps
-
In R. Baeza-Yates and U. Manber, editors, Viflas del Mar, Chili, University of Chili
-
M.-F. Sagot, V. Escalier, A. Viari, and H. Soldano. Searching for repeated words in a text allowing for mismatches and gaps. In R. Baeza-Yates and U. Manber, editors, Second South American Workshop on String Processing, pages 87-100, Viflas del Mar, Chili, 1995. University of Chili.
-
(1995)
Second South American Workshop on String Processing
, pp. 87-100
-
-
Sagot, M.-F.1
Escalier, V.2
Viari, A.3
Soldano, H.4
-
17
-
-
84957713103
-
A double combinatorial approach to discovering patterns in biological sequences
-
In D. Hirschberg and G. Myers, editors, Springer-Verlag
-
M.-F. Sagot and A. Viari. A double combinatorial approach to discovering patterns in biological sequences. In D. Hirschberg and G. Myers, editors, Combinatorial Pattern Matching, volume 1075 of Lecture Notes in Computer Science, pages 186-208. Springer-Verlag, 1996.
-
(1996)
Combinatorial Pattern Matching, Volume 1075 of Lecture Notes in Computer Science
, pp. 186-208
-
-
Sagot, M.-F.1
Viari, A.2
-
18
-
-
0031163959
-
Multiple comparison: A peptide matching approach
-
presented at Combinatorial Pattern Matching 1995
-
M.-F. Sagot, A. Viari, and H. Soldano. Multiple comparison: a peptide matching approach. Theoret. Comput. Sci., 180:115-137, 1997. presented at Combinatorial Pattern Matching 1995.
-
(1997)
Theoret. Comput. Sci
, vol.180
, pp. 115-137
-
-
Sagot, M.-F.1
Viari, A.2
Soldano, H.3
-
20
-
-
85026758927
-
Approximate string matching over suffix trees
-
In Z. Galil A. Apos-tolico, M. Crochemore and U. Manber, editors, Springer-Verlag
-
E. Ukkonen. Approximate string matching over suffix trees. In Z. Galil A. Apos-tolico, M. Crochemore and U. Manber, editors, Combinatorial Pattern Matching, volume 684 of Lecture Notes in Computer Science, pages 228-242. Springer-Verlag, 1993.
-
(1993)
Combinatorial Pattern Matching, Volume 684 of Lecture Notes in Computer Science
, pp. 228-242
-
-
Ukkonen, E.1
-
21
-
-
0023057161
-
Multiple sequence alignments by consensus
-
M. S. Waterman. Multiple sequence alignments by consensus. Nucleic Acids Res., 14:9095-9102, 1986.
-
(1986)
Nucleic Acids Res
, vol.14
, pp. 9095-9102
-
-
Waterman, M.S.1
-
22
-
-
0041748378
-
Consensus patterns in sequences
-
In M. S. Waterman, editor, CRC Press
-
M. S. Waterman. Consensus patterns in sequences. In M. S. Waterman, editor, Mathematical Methods for DNA Sequences, pages 93-116. CRC Press, 1989.
-
(1989)
Mathematical Methods for DNA Sequences
, pp. 93-116
-
-
Waterman, M.S.1
-
23
-
-
0021665479
-
Pattern recognition in several sequences: Consensus and alignment
-
M. S. Waterman, R. Arratia, and D. J. Galas. Pattern recognition in several sequences: consensus and alignment. Bull. Math. Biol., 46:515-527, 1984.
-
(1984)
Bull. Math. Biol
, vol.46
, pp. 515-527
-
-
Waterman, M.S.1
Arratia, R.2
Galas, D.J.3
-
25
-
-
84976654685
-
Fast text searching allowing errors
-
S. Wu and U. Manber. Fast text searching allowing errors. Commun. ACM, 35:83-91, 1992.
-
(1992)
Commun. ACM
, vol.35
, pp. 83-91
-
-
Wu, S.1
Manber, U.2
|