Binding profiles of chromatin-modifying proteins are predictive for transcriptional activity and promoter-proximal pausing

Journal of Computational Biology

Volumn 19, Issue 2, 2012, Pages 126-138

  Sakoparnig, Thomas ^a,b   Kockmann, Tobias ^a   Paro, Renato ^a,c   Beisel, Christian ^a   Beerenwinkel, Niko ^a,b  

^a ETH ZURICH   (Switzerland)

^b SWISS INSTITUTE OF BIOINFORMATICS   (Switzerland)

^c UNIVERSITY OF BASEL   (Switzerland)

Author keywords

chromatin proteins; regression analysis; stability solution; transcriptional regulation

Indexed keywords

DROSOPHILA PROTEIN; NONHISTONE PROTEIN; RNA POLYMERASE II; TRANSCRIPTION FACTOR;

AMINO ACID SEQUENCE; ANIMAL; BIOLOGICAL MODEL; CHROMATIN; CHROMATIN ASSEMBLY AND DISASSEMBLY; COMPUTER SIMULATION; CONFERENCE PAPER; DROSOPHILA MELANOGASTER; GENE EXPRESSION REGULATION; GENETIC TRANSCRIPTION; GENETICS; METABOLISM; MOLECULAR GENETICS; PROMOTER REGION; PROTEIN BINDING; REGRESSION ANALYSIS; STATISTICAL ANALYSIS; STATISTICAL MODEL; TRANSCRIPTION INITIATION;

AMINO ACID SEQUENCE; ANIMALS; CHROMATIN; CHROMATIN ASSEMBLY AND DISASSEMBLY; CHROMOSOMAL PROTEINS, NON-HISTONE; COMPUTER SIMULATION; DATA INTERPRETATION, STATISTICAL; DROSOPHILA MELANOGASTER; DROSOPHILA PROTEINS; GENE EXPRESSION REGULATION; LINEAR MODELS; MODELS, GENETIC; MOLECULAR SEQUENCE DATA; PROMOTER REGIONS, GENETIC; PROTEIN BINDING; REGRESSION ANALYSIS; RNA POLYMERASE II; TRANSCRIPTION FACTORS; TRANSCRIPTION, GENETIC; TRANSCRIPTIONAL ACTIVATION;

DROSOPHILA MELANOGASTER;

EID: 84856689961     PISSN: 10665277     EISSN: None     Source Type: Journal    
DOI: 10.1089/cmb.2011.0258     Document Type: Conference Paper

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