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Volumn 83, Issue 4, 2012, Pages 856-865

Light-dependent and asynchronous replication of cyanobacterial multi-copy chromosomes

Author keywords

[No Author keywords available]

Indexed keywords

GENOMIC DNA;

EID: 84856574063     PISSN: 0950382X     EISSN: 13652958     Source Type: Journal    
DOI: 10.1111/j.1365-2958.2012.07971.x     Document Type: Article
Times cited : (58)

References (40)
  • 1
    • 26944479228 scopus 로고    scopus 로고
    • Localization of replication forks in wild-type and mukB mutant cells of Escherichia coli
    • Adachi, S., Kohiyama, M., Onogi, T., and Hiraga, S. (2005) Localization of replication forks in wild-type and mukB mutant cells of Escherichia coli. Mol Genet Genomics 274: 264-271.
    • (2005) Mol Genet Genomics , vol.274 , pp. 264-271
    • Adachi, S.1    Kohiyama, M.2    Onogi, T.3    Hiraga, S.4
  • 2
    • 0018670561 scopus 로고
    • Macromolecular synthesis in synchronized cultures of Anacystis nidulans
    • Asato, Y. (1979) Macromolecular synthesis in synchronized cultures of Anacystis nidulans. J Bacteriol 140: 65-72.
    • (1979) J Bacteriol , vol.140 , pp. 65-72
    • Asato, Y.1
  • 3
    • 0023359272 scopus 로고
    • Why do chloroplasts and mitochondria contain so many copies of their genome?
    • Bendich, A.J. (1987) Why do chloroplasts and mitochondria contain so many copies of their genome? Bioessays 6: 279-282.
    • (1987) Bioessays , vol.6 , pp. 279-282
    • Bendich, A.J.1
  • 4
    • 0025357077 scopus 로고
    • Relationship between DNA cycle and growth rate in Synechococcus sp. strain PCC 6301
    • Binder, B.J., and Chisholm, S.W. (1990) Relationship between DNA cycle and growth rate in Synechococcus sp. strain PCC 6301. J Bacteriol 172: 2313-2319.
    • (1990) J Bacteriol , vol.172 , pp. 2313-2319
    • Binder, B.J.1    Chisholm, S.W.2
  • 5
    • 0028801860 scopus 로고
    • Cell cycle regulation in marine Synechococcus sp. strains
    • Binder, B.J., and Chisholm, S.W. (1995) Cell cycle regulation in marine Synechococcus sp. strains. Appl Environ Microbiol 61: 708-717.
    • (1995) Appl Environ Microbiol , vol.61 , pp. 708-717
    • Binder, B.J.1    Chisholm, S.W.2
  • 6
    • 0023766613 scopus 로고
    • A model for initiation at origins of DNA replication
    • Bramhill, D., and Kornberg, A. (1988) A model for initiation at origins of DNA replication. Cell 54: 915-918.
    • (1988) Cell , vol.54 , pp. 915-918
    • Bramhill, D.1    Kornberg, A.2
  • 7
    • 0343953085 scopus 로고    scopus 로고
    • Long-distance control of origin choice and replication timing in the human beta-globin locus are independent of the locus control region
    • Cimbora, D.M., Schubeler, D., Reik, A., Hamilton, J., Francastel, C., Epner, E.M., and Groudine, M. (2000) Long-distance control of origin choice and replication timing in the human beta-globin locus are independent of the locus control region. Mol Cell Biol 20: 5581-5591.
    • (2000) Mol Cell Biol , vol.20 , pp. 5581-5591
    • Cimbora, D.M.1    Schubeler, D.2    Reik, A.3    Hamilton, J.4    Francastel, C.5    Epner, E.M.6    Groudine, M.7
  • 8
    • 0014413357 scopus 로고
    • Chromosome replication and the division cycle of Escherichia coli B/r
    • Cooper, S., and Helmstetter, C.E. (1968) Chromosome replication and the division cycle of Escherichia coli B/r. J Mol Biol 31: 519-540.
    • (1968) J Mol Biol , vol.31 , pp. 519-540
    • Cooper, S.1    Helmstetter, C.E.2
  • 9
    • 0029044970 scopus 로고
    • Bromodeoxyuridine: a diagnostic tool in biology and medicine, Part I: Historical perspectives, histochemical methods and cell kinetics
    • Dolbeare, F. (1995) Bromodeoxyuridine: a diagnostic tool in biology and medicine, Part I: Historical perspectives, histochemical methods and cell kinetics. Histochem J 27: 339-369.
    • (1995) Histochem J , vol.27 , pp. 339-369
    • Dolbeare, F.1
  • 10
    • 56949083657 scopus 로고    scopus 로고
    • How a cyanobacterium tells time
    • Dong, G., and Golden, S.S. (2008) How a cyanobacterium tells time. Curr Opin Microbiol 11: 541-546.
    • (2008) Curr Opin Microbiol , vol.11 , pp. 541-546
    • Dong, G.1    Golden, S.S.2
  • 11
    • 0032860238 scopus 로고    scopus 로고
    • Asymmetric substitution patterns: a review of possible underlying mutational or selective mechanisms
    • Frank, A.C., and Lobry, J.R. (1999) Asymmetric substitution patterns: a review of possible underlying mutational or selective mechanisms. Gene 238: 65-77.
    • (1999) Gene , vol.238 , pp. 65-77
    • Frank, A.C.1    Lobry, J.R.2
  • 12
    • 0021720088 scopus 로고
    • The dnaA protein complex with the E. coli chromosomal replication origin (oriC) and other DNA sites
    • Fuller, R.S., Funnell, B.E., and Kornberg, A. (1984) The dnaA protein complex with the E. coli chromosomal replication origin (oriC) and other DNA sites. Cell 38: 889-900.
    • (1984) Cell , vol.38 , pp. 889-900
    • Fuller, R.S.1    Funnell, B.E.2    Kornberg, A.3
  • 15
    • 33947110984 scopus 로고    scopus 로고
    • Genome-wide localization of pre-RC sites and identification of replication origins in fission yeast
    • Hayashi, M., Katou, Y., Itoh, T., Tazumi, A., Yamada, Y., Takahashi, T., etal. (2007) Genome-wide localization of pre-RC sites and identification of replication origins in fission yeast. EMBO J 26: 1327-1339.
    • (2007) EMBO J , vol.26 , pp. 1327-1339
    • Hayashi, M.1    Katou, Y.2    Itoh, T.3    Tazumi, A.4    Yamada, Y.5    Takahashi, T.6
  • 16
    • 0642365202 scopus 로고    scopus 로고
    • Efficient labeling of fission yeast Schizosaccharomyces pombe with thymidine and BUdR
    • Hodson, J.A., Bailis, J.M., and Forsburg, S.L. (2003) Efficient labeling of fission yeast Schizosaccharomyces pombe with thymidine and BUdR. Nucleic Acids Res 31: e134.
    • (2003) Nucleic Acids Res , vol.31
    • Hodson, J.A.1    Bailis, J.M.2    Forsburg, S.L.3
  • 17
    • 43549095184 scopus 로고    scopus 로고
    • NblR is a novel one-component response regulator in the cyanobacterium Synechococcus elongatus PCC 7942
    • Kato, H., Chibazakura, T., and Yoshikawa, H. (2008) NblR is a novel one-component response regulator in the cyanobacterium Synechococcus elongatus PCC 7942. Biosci Biotechnol Biochem 72: 1072-1079.
    • (2008) Biosci Biotechnol Biochem , vol.72 , pp. 1072-1079
    • Kato, H.1    Chibazakura, T.2    Yoshikawa, H.3
  • 19
    • 0026014556 scopus 로고
    • The replication, differentiation, and inheritance of plastids with emphasis on the concept of organelle nuclei
    • Kuroiwa, T. (1991) The replication, differentiation, and inheritance of plastids with emphasis on the concept of organelle nuclei. Int Rev Cytol 128: 1-61.
    • (1991) Int Rev Cytol , vol.128 , pp. 1-61
    • Kuroiwa, T.1
  • 20
    • 0032553470 scopus 로고    scopus 로고
    • Localization of bacterial DNA polymerase: evidence for a factory model of replication
    • Lemon, K.P., and Grossman, A.D. (1998) Localization of bacterial DNA polymerase: evidence for a factory model of replication. Science 282: 1516-1519.
    • (1998) Science , vol.282 , pp. 1516-1519
    • Lemon, K.P.1    Grossman, A.D.2
  • 21
    • 0030927986 scopus 로고    scopus 로고
    • Direct evidence for active segregation of oriC regions of the Bacillus subtilis chromosome and co-localization with the SpoOJ partitioning protein
    • Lewis, P.J., and Errington, J. (1997) Direct evidence for active segregation of oriC regions of the Bacillus subtilis chromosome and co-localization with the SpoOJ partitioning protein. Mol Microbiol 25: 945-954.
    • (1997) Mol Microbiol , vol.25 , pp. 945-954
    • Lewis, P.J.1    Errington, J.2
  • 22
    • 55549097836 scopus 로고    scopus 로고
    • Mapping short DNA sequencing reads and calling variants using mapping quality scores
    • Li, H., Ruan, J., and Durbin, R. (2008) Mapping short DNA sequencing reads and calling variants using mapping quality scores. Genome Res 18: 1851-1858.
    • (2008) Genome Res , vol.18 , pp. 1851-1858
    • Li, H.1    Ruan, J.2    Durbin, R.3
  • 23
    • 0030006470 scopus 로고    scopus 로고
    • An unusual gene arrangement for the putative chromosome replication origin and circadian expression of dnaN in Synechococcus sp. strain PCC 7942
    • Liu, Y., and Tsinoremas, N.F. (1996) An unusual gene arrangement for the putative chromosome replication origin and circadian expression of dnaN in Synechococcus sp. strain PCC 7942. Gene 172: 105-109.
    • (1996) Gene , vol.172 , pp. 105-109
    • Liu, Y.1    Tsinoremas, N.F.2
  • 24
    • 0029985398 scopus 로고    scopus 로고
    • Asymmetric substitution patterns in the two DNA strands of bacteria
    • Lobry, J.R. (1996) Asymmetric substitution patterns in the two DNA strands of bacteria. Mol Biol Evol 13: 660-665.
    • (1996) Mol Biol Evol , vol.13 , pp. 660-665
    • Lobry, J.R.1
  • 25
    • 0016258975 scopus 로고
    • Control of macromolecular composition and cell division in the blue-green algae Anacystis nidulans
    • Mann, N., and Carr, N.G. (1974) Control of macromolecular composition and cell division in the blue-green algae Anacystis nidulans. J Gen Microbiol 83: 399-405.
    • (1974) J Gen Microbiol , vol.83 , pp. 399-405
    • Mann, N.1    Carr, N.G.2
  • 26
    • 0028279759 scopus 로고
    • DNA repair in the extremely radioresistant bacterium Deinococcus radiodurans
    • Minton, K.W. (1994) DNA repair in the extremely radioresistant bacterium Deinococcus radiodurans. Mol Microbiol 13: 9-15.
    • (1994) Mol Microbiol , vol.13 , pp. 9-15
    • Minton, K.W.1
  • 27
    • 16244387910 scopus 로고    scopus 로고
    • Identification of cyanobacterial cell division genes by comparative and mutational analyses
    • Miyagishima, S.Y., Wolk, C., and Osteryoung, K.W. (2005) Identification of cyanobacterial cell division genes by comparative and mutational analyses. Mol Microbiol 56: 126-143.
    • (2005) Mol Microbiol , vol.56 , pp. 126-143
    • Miyagishima, S.Y.1    Wolk, C.2    Osteryoung, K.W.3
  • 28
    • 78349310083 scopus 로고    scopus 로고
    • Cell division cycles and circadian rhythms
    • Ditty, J., Mackey, S.R., and Johnson, C.H. (eds). Berlin: Springer
    • Mori, T. (2009) Cell division cycles and circadian rhythms. In Bacterial Circadian Programs. Ditty, J., Mackey, S.R., and Johnson, C.H. (eds). Berlin: Springer, pp. 183-204.
    • (2009) Bacterial Circadian Programs , pp. 183-204
    • Mori, T.1
  • 29
    • 0029790052 scopus 로고    scopus 로고
    • Circadian gating of cell division in cyanobacteria growing with average doubling times of less than 24 hours
    • Mori, T., Binder, B., and Johnson, C.H. (1996) Circadian gating of cell division in cyanobacteria growing with average doubling times of less than 24 hours. Proc Natl Acad Sci USA 93: 10183-10188.
    • (1996) Proc Natl Acad Sci USA , vol.93 , pp. 10183-10188
    • Mori, T.1    Binder, B.2    Johnson, C.H.3
  • 30
    • 77957830494 scopus 로고    scopus 로고
    • An extreme thermophile, Thermus thermophilus, is a polyploid bacterium
    • Ohtani, N., Tomita, M., and Itaya, M. (2010) An extreme thermophile, Thermus thermophilus, is a polyploid bacterium. J Bacteriol 192: 5499-5505.
    • (2010) J Bacteriol , vol.192 , pp. 5499-5505
    • Ohtani, N.1    Tomita, M.2    Itaya, M.3
  • 31
    • 0036174883 scopus 로고    scopus 로고
    • Replication-dependent recruitment of the beta-subunit of DNA polymerase III from cytosolic spaces to replication forks in Escherichia coli
    • Onogi, T., Ohsumi, K., Katayama, T., and Hiraga, S. (2002) Replication-dependent recruitment of the beta-subunit of DNA polymerase III from cytosolic spaces to replication forks in Escherichia coli. J Bacteriol 184: 867-870.
    • (2002) J Bacteriol , vol.184 , pp. 867-870
    • Onogi, T.1    Ohsumi, K.2    Katayama, T.3    Hiraga, S.4
  • 32
    • 35548930233 scopus 로고    scopus 로고
    • Fluorescence staining of live cyanobacterial cells suggest non-stringent chromosome segregation and absence of a connection between cytoplasmic and thylakoid membranes
    • Schneider, D., Fuhrmann, E., Scholz, I., Hess, W.R., and Graumann, P.L. (2007) Fluorescence staining of live cyanobacterial cells suggest non-stringent chromosome segregation and absence of a connection between cytoplasmic and thylakoid membranes. BMC Cell Biol 8: 39.
    • (2007) BMC Cell Biol , vol.8 , pp. 39
    • Schneider, D.1    Fuhrmann, E.2    Scholz, I.3    Hess, W.R.4    Graumann, P.L.5
  • 33
    • 50849126804 scopus 로고    scopus 로고
    • High-precision, whole-genome sequencing of laboratory strains facilitates genetic studies
    • Srivatsan, A., Han, Y., Peng, J., Tehranchi, A.K., Gibbs, R., Wang, J.D., and Chen, R. (2008) High-precision, whole-genome sequencing of laboratory strains facilitates genetic studies. PLoS Genet 4: e1000139.
    • (2008) PLoS Genet , vol.4
    • Srivatsan, A.1    Han, Y.2    Peng, J.3    Tehranchi, A.K.4    Gibbs, R.5    Wang, J.D.6    Chen, R.7
  • 34
    • 34250629241 scopus 로고    scopus 로고
    • Complete nucleotide sequence of the freshwater unicellular cyanobacterium Synechococcus elongatus PCC 6301 chromosome: gene content and organization
    • Sugita, C., Ogata, K., Shikata, M., Jikuya, H., Takano, J., Furumichi, M., etal. (2007) Complete nucleotide sequence of the freshwater unicellular cyanobacterium Synechococcus elongatus PCC 6301 chromosome: gene content and organization. Photosynth Res 93: 55-67.
    • (2007) Photosynth Res , vol.93 , pp. 55-67
    • Sugita, C.1    Ogata, K.2    Shikata, M.3    Jikuya, H.4    Takano, J.5    Furumichi, M.6
  • 35
    • 0028306459 scopus 로고
    • Expression of achaete-scute homolog 3 in Xenopus embryos converts ectodermal cells to a neural fate
    • Turner, D.L., and Weintraub, H. (1994) Expression of achaete-scute homolog 3 in Xenopus embryos converts ectodermal cells to a neural fate. Genes Dev 8: 1434-1447.
    • (1994) Genes Dev , vol.8 , pp. 1434-1447
    • Turner, D.L.1    Weintraub, H.2
  • 36
    • 70350194739 scopus 로고    scopus 로고
    • Metabolism, cell growth and the bacterial cell cycle
    • Wang, J.D., and Levin, P.A. (2009) Metabolism, cell growth and the bacterial cell cycle. Nat Rev Microbiol 7: 822-827.
    • (2009) Nat Rev Microbiol , vol.7 , pp. 822-827
    • Wang, J.D.1    Levin, P.A.2
  • 37
    • 77949826561 scopus 로고    scopus 로고
    • Circadian gating of the cell cycle revealed in single cyanobacterial cells
    • Yang, Q., Pando, B.F., Dong, G., Golden, S.S., and van Oudenaarden, A. (2010) Circadian gating of the cell cycle revealed in single cyanobacterial cells. Science 327: 1522-1526.
    • (2010) Science , vol.327 , pp. 1522-1526
    • Yang, Q.1    Pando, B.F.2    Dong, G.3    Golden, S.S.4    van Oudenaarden, A.5
  • 38
    • 0026045414 scopus 로고
    • Structure and function of DnaA and the DnaA-box in eubacteria: evolutionary relationships of bacterial replication origins
    • Yoshikawa, H., and Ogasawara, N. (1991) Structure and function of DnaA and the DnaA-box in eubacteria: evolutionary relationships of bacterial replication origins. Mol Microbiol 5: 2589-2597.
    • (1991) Mol Microbiol , vol.5 , pp. 2589-2597
    • Yoshikawa, H.1    Ogasawara, N.2
  • 39
    • 8044258924 scopus 로고
    • Sequential replication of the Bacillus subtilis chromosome. 3. Regulation of initiation
    • Yoshikawa, H., O'Sullivan, A., and Sueoka, N. (1964) Sequential replication of the Bacillus subtilis chromosome. 3. Regulation of initiation. Proc Natl Acad Sci USA 52: 973-980.
    • (1964) Proc Natl Acad Sci USA , vol.52 , pp. 973-980
    • Yoshikawa, H.1    O'Sullivan, A.2    Sueoka, N.3
  • 40
    • 20144380867 scopus 로고    scopus 로고
    • Identification of replication origins in archaeal genomes based on the Z-curve method
    • Zhang, R., and Zhang, C.T. (2005) Identification of replication origins in archaeal genomes based on the Z-curve method. Archaea 1: 335-346.
    • (2005) Archaea , vol.1 , pp. 335-346
    • Zhang, R.1    Zhang, C.T.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.